Nicoliella spurrieriana: MOO44_04920
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Entry
MOO44_04920 CDS
T08428
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lbe
Nicoliella spurrieriana
Pathway
lbe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MOO44_04920
09124 Replication and repair
03420 Nucleotide excision repair
MOO44_04920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbe03021
]
MOO44_04920
03036 Chromosome and associated proteins [BR:
lbe03036
]
MOO44_04920
03400 DNA repair and recombination proteins [BR:
lbe03400
]
MOO44_04920
Enzymes [BR:
lbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
MOO44_04920
Transcription machinery [BR:
lbe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MOO44_04920
Chromosome and associated proteins [BR:
lbe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
MOO44_04920
DNA repair and recombination proteins [BR:
lbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MOO44_04920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Helicase_C
PhoH
Motif
Other DBs
NCBI-ProteinID:
UQS86269
UniProt:
A0A976RR22
LinkDB
All DBs
Position
complement(893640..896003)
Genome browser
AA seq
787 aa
AA seq
DB search
MPTVKIGVRDLIKFTLRSGDLNARLNSQNTGQQGAKIHRKLQNQHGTGYQAEQFLEQLVT
INNNQYLVNGRADGIIMDEEPVIEEIKTSDVEFNDLPDSILTLYWGQVSIYAHLLMNTDE
SIEQVKMQLTYVQTPEQRITKQIREIKRDEAQAFFTHVIDEYREWLVLREQLTHQRVASA
KQLAFPFAEFRTGQRDFAAVVYKTIAFKKHLFAEAPTGTGKTISTLFPTIKAMGEQLIDR
CFYLTAKQSTRRVAEDAMAIMGEQGLRAKSITLTAKEQITFAAERDLAAEQNPYMIGYYD
RLKPALKDILNHHDQITRSTIEEYAEQYQIDPFEFSLDLSEFCDVIIGDYNYLFDPQVHL
ARFFTVPDDRNCFLVDEAHNLVSRSREMYSTAISNYGLTDMIDQLKKEPVKNEAIIRPLR
TIKNSFAHYYRLLGKEQVETMVFETPLTNIVQHLSDAALAIHRWLPKQADNDTTKRVVEF
YLTCLNYLKINDRYDPKIYRTRLIRRGLTITFRQFCMDPSEFIAETLACGGSTIFFSATL
SPIDYYRRVLGDEDDSLAYQLASPFPPANQLILTANTIHTTYHQRQASIPKIHDAIMAMV
RAKPGHYLFFFPSFKYMERVREFFETNDREQKLIVQTRDMTVEQREQYLAAFRNHDQSMV
IGFAILGGIFAEGIDLSGDQLIGVGIVSVGLPGLNEETNLVRDYFDAENGNGFTYAYQLP
GWNHVVQAAGRLIRTASDQGIVTLMDSRFNQARYRQLFPTNWQLTQTVGTAQQLNQRANQ
FWHHQLK
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccgttaaaattggggtccgcgatttaattaagttcactctcagaagtggcgac
ttaaacgcccgtttaaatagtcaaaataccggccaacagggtgccaagatccaccgtaag
ctgcaaaaccaacatggaactggataccaagcagaacaatttctagaacaattagtgacc
atcaataataatcaatacttagtcaacggacgtgctgacggcatcatcatggacgaagaa
cccgtaatcgaggagatcaagacctcagacgttgaattcaacgacttaccggatagcatc
ctaacgctttattggggacaggtaagcatctatgcccacctattaatgaacaccgatgaa
tcgattgaacaagttaaaatgcagctgacctacgtgcaaacccctgagcaaaggatcact
aaacaaattcgtgaaattaagcgtgatgaagcacaggccttcttcacacacgtcattgat
gagtaccgcgaatggctcgtcctgcgcgaacaattgacccaccaacgggtggctagcgct
aagcaattagcctttccgtttgcggagtttcgaacggggcaacgcgattttgcagcggtc
gtttacaaaaccatcgcgttcaaaaagcacctctttgccgaagccccgactggcactggt
aaaacgatttcgacgctctttccaaccatcaaggcgatgggcgaacaattaatcgaccgt
tgcttttacctaacggctaagcaaagtactcgccgggtcgcagaggatgcaatggccatc
atgggtgaacagggcttaagagctaagagtatcaccctaactgcaaaggaacaaattaca
ttcgcagcagaacgagacctagctgcggagcaaaacccctacatgattggctattacgat
cgcctcaaaccagcattaaaggacatcttaaatcatcatgatcaaatcacccgttccacg
atcgaagaatatgcggaacaatatcagatcgatcccttcgaattttcattggatctgagt
gaattttgtgacgtcatcattggtgattataactacctcttcgacccccaagtccacttg
gcacggttctttacggtcccagacgaccgtaattgcttcttggtcgatgaggcgcacaac
ctggtcagccggtcccgtgaaatgtattccaccgccatttccaactacggactcaccgat
atgattgatcaattaaaaaaagaacccgtcaaaaacgaagcgatcatcaggccgctacgt
acgatcaaaaactcatttgcccactactaccgactcttgggcaaggaacaggtcgaaacg
atggtctttgaaacgcccctgaccaatatcgtccaacacctttccgacgcagccctggca
atccaccggtggctcccgaagcaagcggataacgatacaactaagcgggtggtcgaattc
taccttacctgcctaaattaccttaagatcaacgaccgttatgaccctaaaatctatcgg
acccgcttaattcgccgcggcttaacgattacgttccgccagttttgcatggatcccagt
gagttcatcgcagaaacgctcgcctgtggtggcagcaccattttcttttccgcgaccctc
tcgccaatcgattactaccgtcgggtcctgggcgacgaagacgatagtttggcctaccaa
ctcgcctccccatttccacccgccaatcagctgattttaacggcgaataccattcacacc
acctaccatcaacgccaagccagcatccctaaaatccacgatgccatcatggcaatggtc
agggctaagccgggccactacctctttttcttcccctcgttcaagtacatggagcgggtc
cgggaattctttgaaaccaacgaccgggagcaaaagttaatcgtccagacccgtgatatg
actgtcgagcaacgcgaacagtacctagcagcctttcgcaatcatgaccaatcgatggtg
attgggtttgccattttaggtggaatctttgctgagggaatcgaccttagtggcgaccag
ttgattggggtcggcatcgtcagtgtcggactgccgggattaaatgaagaaacgaacctc
gttcgcgattacttcgatgctgaaaatggcaacggctttacctacgcctaccaactcccc
ggctggaaccacgtggtccaagctgccggccggttaattcgtacggccagcgatcagggc
atcgttaccctaatggatagccggttcaatcaagctcgctaccgccaattatttcccacc
aactggcaattgactcaaacggtggggaccgcccaacagttaaaccaaagggccaatcag
ttttggcaccaccaactaaaataa
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