Nicoliella spurrieriana: MOO44_06320
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Entry
MOO44_06320 CDS
T08428
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lbe
Nicoliella spurrieriana
Pathway
lbe03030
DNA replication
lbe03430
Mismatch repair
lbe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MOO44_06320
03430 Mismatch repair
MOO44_06320
03440 Homologous recombination
MOO44_06320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbe03032
]
MOO44_06320
03400 DNA repair and recombination proteins [BR:
lbe03400
]
MOO44_06320
Enzymes [BR:
lbe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MOO44_06320
DNA replication proteins [BR:
lbe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MOO44_06320
DNA repair and recombination proteins [BR:
lbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MOO44_06320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_a_NII
DNA_pol3_finger
DNA_pol3_a_NI
tRNA_anti-codon
HHH_6
RNase_H_2
HHH_3
DNA_pol_A_exo1
DEDDh_C
MTP18
YhfH
DUF6120
Motif
Other DBs
NCBI-ProteinID:
UQS86503
UniProt:
A0A976X4Z9
LinkDB
All DBs
Position
1150268..1154593
Genome browser
AA seq
1441 aa
AA seq
DB search
MNKHELFLKLLNQLDLSDQQNAECFKNAEIMQLQVHKKAKEWHFKFRFNAQLPFNVFNDF
IHRLMTTFEPIAKVSFEISVNQPQLTTSLVNEYWDWVVNHSGLNSMMAKQICDASLPSVD
ANRVNLVAENEIVKDFLVNTALGRIEEQYQSCGFPAFTIHTFVDQSETQAKIKAFKDNKA
QNDAEIAKKAISAIKQANEKRANNAKGAPKASGPVLFGKSISTDAEITKLIDINQEERSV
VLNGFVFDKEVRSLRSGRQLLIFKITDYSSSIVVKKFSRNEQDEAQFEAIQKGTWLKLRG
SVQEDNYTHELTMNAFDINTTTHAQRKDTADDKRVELHLHTNMSQMDAIDGIDAFAKRAK
QWGHRAIAITDHSALQGFPAAYSAAQANDLKMIYGVEANVVDDGMEIGFNNAHEDLKKAT
YVVFDIETTGLSAIYDKIIEVSAVKMVHDNVVDQFEEFIDPGFRLSEFTKNLTSITDEMV
HGSKSEETVLKLFREFCGDAIVVGHNVTFDVGFMNVGYERYGMAKIANPIIDTLPLARFL
YPNLKSYRLNTLAKKFDVNLEHHHRAVYDAESTGHLNYLFLKQAEDQYGIKYHDQLNEHM
TEHNAYKHARPFHVTLLAQTQAGLKNLFKLVSLSNVKYFYRVPRIPRSQLVKYREGILVG
SACASGEVFTAMVQKGIEEARQKANFYDYLEVQPQANYQPLIDSQFIHDRNHLHEIIQNM
VQLGAEMNKPVVATGDVHYLDPHEAIYRKILIHSQGGANPLSRQKLPEVHFRTTDEMLAD
FNYLGADVAHKIVVGNSNQIADMIDDDIKPVKDKLYTPHIDGAEDEIKHLTYSKAFDYYG
DPLPELVKNRVDRELKSIIGNGFSVIYLIAQKLVFKSNKDGYLVGSRGSVGSSLVATMAG
ITEVNPLPPHYRCPKCKYSHFYTKGEYSSGYDLPRKDCPNCGTEMIGDGQNIPFETFLGF
KGNKVPDIDLNFSGDYQPIAHNYMKVLFGEQNVYRAGTIGTVADKTAYGYVKAYERDTEQ
NIRSAEVDRLAQGDVGVKRTTGQHPAGIIIVPSDMDIYDFTPIQYPANDQNAEWETTHFD
FHSIHDNILKMDILGHDDPTMIRTLQDLSGIDPQTIPMDDQGVMSIFSGTDILGVTPEQI
QSKTGTLGVPEFGTKFVRGMLEQTHPKNYSQLLQISGLSHGTDVWLGNADEIIKDGTATI
ANVIGCRDNIMTDLINWGLDSETAFQIMESVRKGRGIKDDWMAAMHKVKVPDWYIESCLK
IKYMFPRAHAAAYVLMALRVAYFKVYFPIVYYAAYFSIRADDFDVVAMASGKESVKSAMK
VIQDQGNDASAKDKNLLTVLELANEMLERGFEFEMIDLNRSDANKWLIEGDKLLAPFRAI
PGLGLNVAKQIVAAREDKAFISKEDLAKRGKVSKKIIDFMDENGVLKGLPDENQLSLFDM
L
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaacatgaactctttttaaagcttctcaatcaattagacttatcagaccagcaa
aatgctgaatgctttaagaatgctgaaattatgcagttgcaagtgcataaaaaagcgaag
gagtggcactttaaatttcgctttaatgcgcagttgccatttaacgtttttaacgatttc
attcatcgactaatgactacctttgagcccattgctaaggttagttttgaaattagtgta
aatcaaccgcagttgacaacatccttggttaatgaatattgggattgggtcgttaaccat
agtggattaaattcgatgatggctaagcagatttgtgatgctagcttaccatcagttgat
gctaaccgggtgaatttagttgctgaaaatgaaattgtcaaagattttttagtcaataca
gcactggggcgaattgaggagcaatatcaatcatgtggattcccggcatttacaattcat
acgtttgttgatcaaagtgagacgcaggctaaaattaaggcgtttaaggataataaagct
caaaatgatgcagaaattgctaaaaaggctatttccgcaattaagcaagcaaatgaaaaa
cgagctaataatgctaagggtgctcctaaggctagtggaccggttttatttggaaagtcc
attagtaccgatgcggaaataacgaagcttattgatattaaccaagaggaacgctcagtc
gttttgaatgggtttgtttttgataaggaagttcgctccctacgttccggacgtcagctg
ttgatttttaaaattaccgattatagttcctcaatcgtagttaagaagttctccaggaat
gagcaagatgaagcccaatttgaagcaattcaaaagggaacttggctaaaattacgaggg
agtgttcaagaggataactatactcatgaattgacaatgaatgcttttgatattaacacc
actacccatgcccaacgaaaagacactgctgatgataaacgggtggagttacatttacac
actaacatgagtcaaatggatgcaattgatgggattgatgcatttgcaaagcgtgccaag
caatggggacatcgagcaatcgcgatcactgatcattcagcgcttcaggggtttccggct
gcttatagtgctgctcaggcgaatgacctaaaaatgatttatggagtcgaagcgaacgtg
gtcgacgatggaatggaaattgggtttaacaatgcccatgaagatttaaagaaagctacc
tatgttgtttttgatattgaaactactggtctatcagcgatttatgataaaatcattgaa
gtttctgctgttaaaatggttcatgataatgtggtggatcaatttgaagaatttattgat
cctggttttcgattgagtgaatttaccaaaaatttaacttcaattaccgatgaaatggtc
catggctccaaaagtgaggagaccgttttaaagttattccgtgaattttgcggtgatgca
atcgttgttggccataatgtaacctttgatgtgggctttatgaatgttggatatgaacgc
tacgggatggctaaaattgctaatccaattattgatacgttaccgttagcacgtttttta
taccctaatttaaagagttatcggttaaatacccttgccaagaaattcgatgttaaccta
gaacaccatcaccgggcggtttatgatgctgaaagtaccggtcatttaaactacctcttt
ttaaagcaagctgaagatcagtatggaattaagtatcatgatcaactgaatgagcatatg
actgagcacaatgcttataagcatgctcgaccatttcacgttactttacttgcacagacc
caagcaggactaaagaatttattcaaattagtttcactatcaaacgtaaagtacttctac
cgggtaccacggattccccgaagtcaactagttaaatatcgggaaggcatcttagtgggt
tcggcttgtgcttccggtgaagtatttaccgcaatggtccaaaagggaattgaagaagcc
cgtcagaaggctaatttctatgattacctagaggtgcaaccacaagctaactaccaaccc
ttgattgattcgcagtttattcatgatcgaaaccaccttcatgaaatcattcaaaacatg
gtgcaattgggagctgaaatgaataaaccggtcgtggccactggcgacgttcactattta
gatccacatgaggctatttatcgtaaaattttaatccattctcagggaggggccaaccca
ctcagtagacaaaaattacctgaagtgcattttagaactacggatgaaatgttagctgat
tttaactacctaggtgcggatgtggcccataaaatagtagttggtaattccaatcaaatt
gctgacatgattgatgatgatatcaagccagttaaggataagctatatacgccgcatatt
gatggtgctgaagatgaaattaagcatttgacctactcaaaggcgtttgactactatggc
gatccactaccagaactagttaaaaatagggttgatcgcgaattgaagagtattattgga
aacggattctcagtaatttatttaattgcccaaaaactagtatttaagagtaataaggat
ggttatttagttggctcgcgggggtcagttggctctagtttggttgcaacgatggctgga
attactgaagtcaatccattgccacctcactaccggtgcccaaagtgtaagtattctcat
ttttacactaagggtgagtattcatcaggatatgatttaccacggaaggactgccctaat
tgtggaaccgagatgatcggagatgggcaaaacatcccatttgaaaccttcttaggcttt
aaggggaacaaggtccctgatattgatttgaacttttccggggattatcaaccaattgct
cataactacatgaaggtattgttcggtgaacaaaacgtttatcgggctggaacgattgga
accgttgctgataaaaccgcatatggctatgttaaggcttatgaacgggataccgaacaa
aatattcgttctgctgaggtcgatcgtttagctcaaggtgatgttggggttaagcgtacg
accggtcagcatccggctggaattatcatcgtgcctagtgatatggatatctatgatttt
acgccaattcaatatccagccaatgatcaaaatgcagaatgggaaaccacgcattttgat
ttccattcgattcacgataacattttaaagatggatattttaggtcatgatgatccgacc
atgatcagaaccttgcaagatttatcggggatcgatccacaaacgattccaatggatgat
caaggagtcatgtccattttttctggaactgatattttgggagttacccctgaacagatt
caatctaagacagggacgttaggggttcctgaatttgggactaagttcgtccggggaatg
ttggaacaaacccatcctaagaattattcacaactattacaaatttctggattatcccat
ggaaccgacgtgtggttgggcaatgccgatgaaattattaaggatgggactgcaaccatt
gccaatgtaattggttgtcgtgataatatcatgactgatttgatcaattggggactggat
tcagaaacggcctttcaaattatggaatcagttagaaagggtcgtggaatcaaggatgac
tggatggcagcaatgcataaagtgaaggtccctgattggtatatcgaatcatgtttaaaa
attaagtacatgtttccaagggcccatgctgcagcatatgttttaatggcactacgggta
gcatattttaaggtttattttccaattgtttactatgcagcctacttttcaattcgcgcc
gatgattttgatgtggtcgcaatggctagtggtaaagaatcggtcaaatcagcaatgaag
gtcattcaagaccagggaaatgatgcctctgcaaaggataagaatttattgaccgtcctc
gaattagccaatgagatgttagaacgtggatttgaatttgaaatgattgatttgaatcgt
tcggatgctaacaagtggttaattgagggggataaactcctagctccatttcgggcaatt
ccaggattaggattaaatgttgccaaacaaatcgttgctgctcgtgaagataaggctttt
atttcaaaggaagatctggctaaacgtggtaaggtgtctaagaaaataattgattttatg
gatgaaaatggggtcttaaagggactaccagatgagaatcaattaagcctgtttgatatg
ctatga
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integrated database retrieval system