KEGG   Nicoliella spurrieriana: MOO44_06320
Entry
MOO44_06320       CDS       T08428                                 
Name
(GenBank) PolC-type DNA polymerase III
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
lbe  Nicoliella spurrieriana
Pathway
lbe03030  DNA replication
lbe03430  Mismatch repair
lbe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lbe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MOO44_06320
   03430 Mismatch repair
    MOO44_06320
   03440 Homologous recombination
    MOO44_06320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lbe03032]
    MOO44_06320
   03400 DNA repair and recombination proteins [BR:lbe03400]
    MOO44_06320
Enzymes [BR:lbe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MOO44_06320
DNA replication proteins [BR:lbe03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     MOO44_06320
DNA repair and recombination proteins [BR:lbe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     MOO44_06320
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_a_NII DNA_pol3_finger DNA_pol3_a_NI tRNA_anti-codon HHH_6 RNase_H_2 HHH_3 DNA_pol_A_exo1 DEDDh_C MTP18 YhfH DUF6120
Other DBs
NCBI-ProteinID: UQS86503
UniProt: A0A976X4Z9
LinkDB
Position
1150268..1154593
AA seq 1441 aa
MNKHELFLKLLNQLDLSDQQNAECFKNAEIMQLQVHKKAKEWHFKFRFNAQLPFNVFNDF
IHRLMTTFEPIAKVSFEISVNQPQLTTSLVNEYWDWVVNHSGLNSMMAKQICDASLPSVD
ANRVNLVAENEIVKDFLVNTALGRIEEQYQSCGFPAFTIHTFVDQSETQAKIKAFKDNKA
QNDAEIAKKAISAIKQANEKRANNAKGAPKASGPVLFGKSISTDAEITKLIDINQEERSV
VLNGFVFDKEVRSLRSGRQLLIFKITDYSSSIVVKKFSRNEQDEAQFEAIQKGTWLKLRG
SVQEDNYTHELTMNAFDINTTTHAQRKDTADDKRVELHLHTNMSQMDAIDGIDAFAKRAK
QWGHRAIAITDHSALQGFPAAYSAAQANDLKMIYGVEANVVDDGMEIGFNNAHEDLKKAT
YVVFDIETTGLSAIYDKIIEVSAVKMVHDNVVDQFEEFIDPGFRLSEFTKNLTSITDEMV
HGSKSEETVLKLFREFCGDAIVVGHNVTFDVGFMNVGYERYGMAKIANPIIDTLPLARFL
YPNLKSYRLNTLAKKFDVNLEHHHRAVYDAESTGHLNYLFLKQAEDQYGIKYHDQLNEHM
TEHNAYKHARPFHVTLLAQTQAGLKNLFKLVSLSNVKYFYRVPRIPRSQLVKYREGILVG
SACASGEVFTAMVQKGIEEARQKANFYDYLEVQPQANYQPLIDSQFIHDRNHLHEIIQNM
VQLGAEMNKPVVATGDVHYLDPHEAIYRKILIHSQGGANPLSRQKLPEVHFRTTDEMLAD
FNYLGADVAHKIVVGNSNQIADMIDDDIKPVKDKLYTPHIDGAEDEIKHLTYSKAFDYYG
DPLPELVKNRVDRELKSIIGNGFSVIYLIAQKLVFKSNKDGYLVGSRGSVGSSLVATMAG
ITEVNPLPPHYRCPKCKYSHFYTKGEYSSGYDLPRKDCPNCGTEMIGDGQNIPFETFLGF
KGNKVPDIDLNFSGDYQPIAHNYMKVLFGEQNVYRAGTIGTVADKTAYGYVKAYERDTEQ
NIRSAEVDRLAQGDVGVKRTTGQHPAGIIIVPSDMDIYDFTPIQYPANDQNAEWETTHFD
FHSIHDNILKMDILGHDDPTMIRTLQDLSGIDPQTIPMDDQGVMSIFSGTDILGVTPEQI
QSKTGTLGVPEFGTKFVRGMLEQTHPKNYSQLLQISGLSHGTDVWLGNADEIIKDGTATI
ANVIGCRDNIMTDLINWGLDSETAFQIMESVRKGRGIKDDWMAAMHKVKVPDWYIESCLK
IKYMFPRAHAAAYVLMALRVAYFKVYFPIVYYAAYFSIRADDFDVVAMASGKESVKSAMK
VIQDQGNDASAKDKNLLTVLELANEMLERGFEFEMIDLNRSDANKWLIEGDKLLAPFRAI
PGLGLNVAKQIVAAREDKAFISKEDLAKRGKVSKKIIDFMDENGVLKGLPDENQLSLFDM
L
NT seq 4326 nt   +upstreamnt  +downstreamnt
ttgaataaacatgaactctttttaaagcttctcaatcaattagacttatcagaccagcaa
aatgctgaatgctttaagaatgctgaaattatgcagttgcaagtgcataaaaaagcgaag
gagtggcactttaaatttcgctttaatgcgcagttgccatttaacgtttttaacgatttc
attcatcgactaatgactacctttgagcccattgctaaggttagttttgaaattagtgta
aatcaaccgcagttgacaacatccttggttaatgaatattgggattgggtcgttaaccat
agtggattaaattcgatgatggctaagcagatttgtgatgctagcttaccatcagttgat
gctaaccgggtgaatttagttgctgaaaatgaaattgtcaaagattttttagtcaataca
gcactggggcgaattgaggagcaatatcaatcatgtggattcccggcatttacaattcat
acgtttgttgatcaaagtgagacgcaggctaaaattaaggcgtttaaggataataaagct
caaaatgatgcagaaattgctaaaaaggctatttccgcaattaagcaagcaaatgaaaaa
cgagctaataatgctaagggtgctcctaaggctagtggaccggttttatttggaaagtcc
attagtaccgatgcggaaataacgaagcttattgatattaaccaagaggaacgctcagtc
gttttgaatgggtttgtttttgataaggaagttcgctccctacgttccggacgtcagctg
ttgatttttaaaattaccgattatagttcctcaatcgtagttaagaagttctccaggaat
gagcaagatgaagcccaatttgaagcaattcaaaagggaacttggctaaaattacgaggg
agtgttcaagaggataactatactcatgaattgacaatgaatgcttttgatattaacacc
actacccatgcccaacgaaaagacactgctgatgataaacgggtggagttacatttacac
actaacatgagtcaaatggatgcaattgatgggattgatgcatttgcaaagcgtgccaag
caatggggacatcgagcaatcgcgatcactgatcattcagcgcttcaggggtttccggct
gcttatagtgctgctcaggcgaatgacctaaaaatgatttatggagtcgaagcgaacgtg
gtcgacgatggaatggaaattgggtttaacaatgcccatgaagatttaaagaaagctacc
tatgttgtttttgatattgaaactactggtctatcagcgatttatgataaaatcattgaa
gtttctgctgttaaaatggttcatgataatgtggtggatcaatttgaagaatttattgat
cctggttttcgattgagtgaatttaccaaaaatttaacttcaattaccgatgaaatggtc
catggctccaaaagtgaggagaccgttttaaagttattccgtgaattttgcggtgatgca
atcgttgttggccataatgtaacctttgatgtgggctttatgaatgttggatatgaacgc
tacgggatggctaaaattgctaatccaattattgatacgttaccgttagcacgtttttta
taccctaatttaaagagttatcggttaaatacccttgccaagaaattcgatgttaaccta
gaacaccatcaccgggcggtttatgatgctgaaagtaccggtcatttaaactacctcttt
ttaaagcaagctgaagatcagtatggaattaagtatcatgatcaactgaatgagcatatg
actgagcacaatgcttataagcatgctcgaccatttcacgttactttacttgcacagacc
caagcaggactaaagaatttattcaaattagtttcactatcaaacgtaaagtacttctac
cgggtaccacggattccccgaagtcaactagttaaatatcgggaaggcatcttagtgggt
tcggcttgtgcttccggtgaagtatttaccgcaatggtccaaaagggaattgaagaagcc
cgtcagaaggctaatttctatgattacctagaggtgcaaccacaagctaactaccaaccc
ttgattgattcgcagtttattcatgatcgaaaccaccttcatgaaatcattcaaaacatg
gtgcaattgggagctgaaatgaataaaccggtcgtggccactggcgacgttcactattta
gatccacatgaggctatttatcgtaaaattttaatccattctcagggaggggccaaccca
ctcagtagacaaaaattacctgaagtgcattttagaactacggatgaaatgttagctgat
tttaactacctaggtgcggatgtggcccataaaatagtagttggtaattccaatcaaatt
gctgacatgattgatgatgatatcaagccagttaaggataagctatatacgccgcatatt
gatggtgctgaagatgaaattaagcatttgacctactcaaaggcgtttgactactatggc
gatccactaccagaactagttaaaaatagggttgatcgcgaattgaagagtattattgga
aacggattctcagtaatttatttaattgcccaaaaactagtatttaagagtaataaggat
ggttatttagttggctcgcgggggtcagttggctctagtttggttgcaacgatggctgga
attactgaagtcaatccattgccacctcactaccggtgcccaaagtgtaagtattctcat
ttttacactaagggtgagtattcatcaggatatgatttaccacggaaggactgccctaat
tgtggaaccgagatgatcggagatgggcaaaacatcccatttgaaaccttcttaggcttt
aaggggaacaaggtccctgatattgatttgaacttttccggggattatcaaccaattgct
cataactacatgaaggtattgttcggtgaacaaaacgtttatcgggctggaacgattgga
accgttgctgataaaaccgcatatggctatgttaaggcttatgaacgggataccgaacaa
aatattcgttctgctgaggtcgatcgtttagctcaaggtgatgttggggttaagcgtacg
accggtcagcatccggctggaattatcatcgtgcctagtgatatggatatctatgatttt
acgccaattcaatatccagccaatgatcaaaatgcagaatgggaaaccacgcattttgat
ttccattcgattcacgataacattttaaagatggatattttaggtcatgatgatccgacc
atgatcagaaccttgcaagatttatcggggatcgatccacaaacgattccaatggatgat
caaggagtcatgtccattttttctggaactgatattttgggagttacccctgaacagatt
caatctaagacagggacgttaggggttcctgaatttgggactaagttcgtccggggaatg
ttggaacaaacccatcctaagaattattcacaactattacaaatttctggattatcccat
ggaaccgacgtgtggttgggcaatgccgatgaaattattaaggatgggactgcaaccatt
gccaatgtaattggttgtcgtgataatatcatgactgatttgatcaattggggactggat
tcagaaacggcctttcaaattatggaatcagttagaaagggtcgtggaatcaaggatgac
tggatggcagcaatgcataaagtgaaggtccctgattggtatatcgaatcatgtttaaaa
attaagtacatgtttccaagggcccatgctgcagcatatgttttaatggcactacgggta
gcatattttaaggtttattttccaattgtttactatgcagcctacttttcaattcgcgcc
gatgattttgatgtggtcgcaatggctagtggtaaagaatcggtcaaatcagcaatgaag
gtcattcaagaccagggaaatgatgcctctgcaaaggataagaatttattgaccgtcctc
gaattagccaatgagatgttagaacgtggatttgaatttgaaatgattgatttgaatcgt
tcggatgctaacaagtggttaattgagggggataaactcctagctccatttcgggcaatt
ccaggattaggattaaatgttgccaaacaaatcgttgctgctcgtgaagataaggctttt
atttcaaaggaagatctggctaaacgtggtaaggtgtctaagaaaataattgattttatg
gatgaaaatggggtcttaaagggactaccagatgagaatcaattaagcctgtttgatatg
ctatga

DBGET integrated database retrieval system