Leptospira biflexa serovar Patoc Patoc 1 (Ames): LBF_0167
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Entry
LBF_0167 CDS
T00712
Symbol
rnd
Name
(GenBank) Ribonuclease III
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
lbf
Leptospira biflexa serovar Patoc Patoc 1 (Ames)
Brite
KEGG Orthology (KO) [BR:
lbf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbf03016
]
LBF_0167 (rnd)
Enzymes [BR:
lbf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LBF_0167 (rnd)
Transfer RNA biogenesis [BR:
lbf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LBF_0167 (rnd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ABZ92713
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All DBs
Position
I:complement(170889..172109)
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AA seq
406 aa
AA seq
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MQINSNYILVDTAKALDLALINLRQSKIMSIDTESSGYYTYYPKVCLIQINSNGKNYLID
PLKITNLSALGPLFEDPNILKIFHSAQDDIKALKRDFGFKFVNTADTMISSRLLSLEQSS
LSFVVEHYHKVTLSKVEQKSNWEIRPLQKQQLKYAALDTAYLESIWLKMEEDLKRRSLYD
EAKSEFDFIASEDYVAKEGEGFSLGKFPDILNFTPLERRKILELLRYRDEKAKRINKASF
RVFNNDRLSQSVKEQPNEEKCIEWFGKKDGTEIYKLLIAEYNDPIDTSELSKRHGEDLNE
DENHKFQNAKKWRLRIMRARRMEHSLLPSNKQLITVLRAAPKNLEELKALNVFSDWKVQN
YGPSLLAAIQGLPFDSMINRLVAIRSKEAFVAKRRKKQNQNSKDEG
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcaattccaactatattctcgtcgatacagcaaaagctttggatttggccctg
atcaatctaaggcagtccaaaatcatgtcgattgacacagagtcttcgggttattacaca
tattatcccaaagtttgtctcattcagatcaattccaatggcaaaaactacctcatagac
ccgctaaaaatcacaaatttgtcagctttgggtcctttgtttgaagatcccaatattctg
aaaatcttccattccgcacaagatgacatcaaagccctcaaacgtgactttgggttcaaa
tttgtgaacacggcggatacgatgatcagctctcgattattgtctttggaacaaagttcg
ttgtcatttgttgtggaacactaccacaaggtaaccctttccaaagtggaacaaaagtcc
aattgggaaattcgccctctgcaaaaacaacaactcaagtatgccgccctcgacacagcc
tatttagaatccatttggttaaaaatggaagaagatctcaaacgcaggtctttgtatgat
gaagccaagtctgaatttgatttcattgcttcggaagattacgtagccaaggaaggggaa
ggattttcccttggaaaatttcctgacattctcaatttcacccctctcgaacgtcgaaaa
attttagaactacttcgttaccgagatgaaaaagcaaaacgaatcaacaaagcaagtttt
cgcgtctttaataatgacagattatctcaatcagtcaaagaacaaccaaacgaagaaaaa
tgtattgaatggtttggaaaaaaagatggtactgagatttataaattactcattgcggaa
tacaatgatcctattgatacttcggaactctccaaacgacatggggaagatttaaacgaa
gatgaaaatcataaattccaaaacgctaaaaaatggcgtcttcgcattatgcgtgctaga
cgaatggaacattctcttttaccatccaataaacaactcatcactgttttaagagcagct
cctaaaaacttagaagaattaaaagccctgaatgtattctctgattggaaagtacaaaac
tatggtccaagtttacttgctgccatccaaggactcccttttgattcgatgatcaaccga
ttggttgccatccgttccaaagaagcatttgtagccaaacgtaggaaaaaacaaaaccaa
aactcgaaagacgagggttga
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