Leptospira biflexa serovar Patoc Patoc 1 (Ames): LBF_0300
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Entry
LBF_0300 CDS
T00712
Symbol
recQ-1
Name
(GenBank) DNA helicase, Superfamily II
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lbf
Leptospira biflexa serovar Patoc Patoc 1 (Ames)
Pathway
lbf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LBF_0300 (recQ-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbf03019
]
LBF_0300 (recQ-1)
03400 DNA repair and recombination proteins [BR:
lbf03400
]
LBF_0300 (recQ-1)
Enzymes [BR:
lbf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LBF_0300 (recQ-1)
Messenger RNA biogenesis [BR:
lbf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LBF_0300 (recQ-1)
DNA repair and recombination proteins [BR:
lbf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LBF_0300 (recQ-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
RQC
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ABZ92846
LinkDB
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Position
I:complement(312534..314390)
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AA seq
618 aa
AA seq
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MDLLSELKTKFGFSEFRLGQREAIESVLDGRDTLAILPTGAGKSLIYQLPASIQKDKLTL
VISPLIALMKDQTESLLAKGIPAAFCNSTQDEVEQMTILSKAVRGELRVLLVSPERALSN
GFLRIFREMDLFSLVVDEAHCVSQWGHDFRPEYRQIHVLREKHPNSFFPILALTATATEK
VQTDVQSALGMRSPNVVLSTFFRPNLKFSVEYPAQERDKADRLMELLEPWKDGRKFPGRA
IIYCATRKKTDEVYDLLKDFGFSVGKYHAGRTDGIRERTQNAYTSGKVPILVATNAFGMG
MDQPDVRLVVHYQVPASLEAYYQEAGRAGRDNLPSECVLFYKAGDVATQVFMLSKETNFK
GGDTLLKYIKEYANNEVCRQVQLCSYFGETIPPCGKCDICSETGVSVHRSKFLESEKVKL
QKKNEKRDYPLSEWEEETIQNFLKEHPAVFGKNIIAKTLVGKRTKDVLRYRMERNPFHGK
LEGIPEEAVVAKLETWVEEKKVLVAGAKYPKLYLPNFSKTKVKLSLSTNKGDSEDGVTKP
KKIPTLHSQILKELMNYRDRKARQLKWKKFMVFQNPVLKRIAERKPRTLSELEATKGVGP
AKVERFGNDIIQILEKWD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
ttggatctactctcggaactcaaaaccaaattcggtttttcagaatttcgccttggacaa
agggaagccattgaatccgttttagatggcagagacaccttggccattttgccaaccggt
gctggaaaatccctcatctaccaactgccagcctccatccagaaagacaagctaacactg
gttatatcgccactgattgctctcatgaaagaccaaacggagagtttacttgcaaaaggg
atcccagctgccttttgtaattccactcaagacgaagtggaacaaatgaccatcctctcc
aaagcggtccgaggagaacttcgcgttttactcgtttctcctgagagagcattgtccaat
ggttttttaagaatctttcgtgagatggatttattttcccttgtggtagatgaagcacac
tgtgtttcccaatgggggcatgactttcggcctgaataccgccaaattcacgttttgcga
gaaaaacaccccaattcttttttccctatactggcactcacagcaacggcaacagaaaaa
gtgcaaaccgatgtccaatctgccctcggcatgcgatcaccgaacgtagtcttatctact
ttttttcgacccaatcttaagttcagcgtagaataccctgctcaagaacgagacaaagcg
gatcgattgatggaacttttggaaccatggaaagatggaaggaaatttccaggtcgcgcc
atcatttactgcgccactcggaaaaaaacagacgaagtgtatgatttactcaaagacttc
ggattttctgtggggaaataccacgctggccgaaccgatggaattcgggaacgcactcaa
aatgcctacacttcaggaaaagttcccatccttgtggcaaccaatgcctttggaatgggt
atggaccaacctgatgttcgtttggtggttcactatcaggttcctgcctctctcgaagcc
tattaccaagaagcaggccgagctgggcgagataacctcccttccgaatgtgttttgttt
tacaaagcaggcgatgttgccacgcaagtgtttatgttgtcaaaggaaacaaacttcaaa
ggaggagatacattactcaaatacatcaaagagtatgccaataatgaagtctgcagacaa
gttcaactctgttcctattttggggaaaccattcctccttgcggaaaatgtgatatctgt
tctgaaactggtgtgagtgtccatcgttccaagtttttagaatcggaaaaagttaaactc
cagaaaaaaaatgagaagagggattacccactttcggagtgggaagaagaaaccattcaa
aattttctaaaagaacacccagcggtctttggaaaaaacatcattgccaaaaccctcgtg
ggcaaacgaaccaaagatgttttgcggtatcgaatggaacgaaatccattccatggtaag
ctcgaaggaatcccagaagaagcagtggttgctaaattggaaacttgggtagaagaaaaa
aaggttttggtggctggagccaaatatcccaaattatatttaccaaatttttcaaaaacg
aaagtcaaattatctttgtcaactaacaaaggtgattcggaagatggagtcacaaaacca
aaaaaaatcccaacattacattctcaaatattaaaagaactcatgaactatcgagatcgg
aaggcgaggcaactcaaatggaaaaagtttatggtgttccaaaatcctgtcctaaaacgc
atcgctgaacgaaaaccaagaaccctatcagaactcgaagccacaaaaggtgtggggcct
gcgaaagtggaacgatttggaaatgatatcattcaaattttagagaagtgggactga
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