Leptospira biflexa serovar Patoc Patoc 1 (Ames): LBF_0814
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Entry
LBF_0814 CDS
T00712
Symbol
uvrB
Name
(GenBank) Helicase subunit of the DNA excision repair complex
KO
K03702
excinuclease ABC subunit B
Organism
lbf
Leptospira biflexa serovar Patoc Patoc 1 (Ames)
Pathway
lbf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LBF_0814 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbf03400
]
LBF_0814 (uvrB)
DNA repair and recombination proteins [BR:
lbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LBF_0814 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LBF_0814 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_22
Kinesin
SWI2_SNF2
AAA_30
AAA_16
Microtub_bd
DUF8170
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABZ93347
UniProt:
B0SDE2
LinkDB
All DBs
Position
I:862948..864942
Genome browser
AA seq
664 aa
AA seq
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MANFKMVSPFKAAGDQVKAIENIAKSFGEGKNKITLVGVTGSGKTFTMAEVITRVKKPTL
ILSHNKTLAAQLFREFKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDMSMNEEIDK
LRLRATSSLLERDDVIIVSSVSCIYGLGSPEDYMNSVVMLQVGDKIDRDQIIRKFLHIQY
ARNDIDFSRGNFRVRGDTIEIMPSYQEEGIRIELFGDEIDGLSKIDPLTGKVKIKLDRVV
VYPAKHFITSGPKIKDAMEKIKEEMAAQKEYFLKQGKHLEAERIESRTNYDMEMLLELGY
CSGIENYSRHLTGRAEGERPACLLDYFPGKDFLLIIDESHVTLPQIGGMYAGDRSRKQTL
VEFGFRLPSALDNRPLNFTEFEAMTPRTLYVSATPDQNELNKSEAVFEQIIRPTGLLDPV
VEVRPTTNQIEDLLNEIRLRINQKERVLITTLTKKMSEDLTDYYKEVGLKIAYLHSEIDT
IERTEIIRDLRKGVYDCIVGINLLREGLDIPEVSLVAILDADKEGFLRNYKSLVQTIGRA
ARNVNGKAILYADRMTDSIKKAMSETERRRLIQEAHNEKMGITPQTIQKEIHDILPREMA
EEDSKEEALKDLEKEFTLKKYKTKDKLREALKREMLRYANDMDFEKAAMFRDKMLALGPD
KIET
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatttcaaaatggtttctccctttaaagctgccggagaccaagtgaaagcaatt
gaaaatattgcgaagtcattcggtgaaggtaaaaataaaatcactctagtcggtgtgact
gggtcaggtaagacgtttactatggccgaggtgatcactcgggtcaaaaaacccaccttg
attttatcgcataataaaacattagcggcgcagttattccgtgagtttaaagaatttttt
cctgaaaatgccgtagagtattttgtttcttattacgattattaccaaccagaagcctat
gtcccttcttctgatacctttatcgaaaaagatatgtcgatgaatgaagaaatcgacaaa
ctgaggttacgtgccacttccagtcttttggaacgagatgatgtgattatcgtaagttca
gtttcttgcatttatggtttgggttcacctgaagattatatgaactctgtggtgatgtta
caagttggtgataaaattgaccgcgaccaaatcattcgtaaattcttacacatccaatat
gcgagaaacgatattgattttagtcgtggtaattttcgtgttcgcggagatacaattgaa
atcatgccttcttaccaagaagagggaatccgaattgaactttttggagatgaaatcgat
ggactttccaaaattgatcctctcacgggaaaggtaaaaatcaaacttgatcgtgtcgtc
gtttatcccgccaaacacttcatcacttcagggcctaaaatcaaagatgccatggaaaaa
atcaaagaagagatggcggcccaaaaggaatattttttaaaacaaggcaaacacctcgaa
gcagaacgaattgagtctcgaacgaattacgatatggaaatgttactcgaacttgggtat
tgtagtgggatcgaaaactactctcgtcatctgactggaagagcggaaggggaacggcct
gcctgtttactcgattattttcctggaaaagattttttactcatcattgatgaatcacat
gtcactctcccacaaattggtggaatgtatgcaggtgatagatccagaaaacaaacgtta
gttgaatttgggtttcggttaccgagtgcactcgataacagaccattgaattttacagaa
tttgaagcgatgactccaaggactttgtatgtgtcagcaactccagaccaaaatgaattg
aataaaagtgaagcggtatttgaacaaatcattcggcctactggacttctggatccagtc
gtggaagtaaggccaacgacaaatcaaatcgaagatttattaaatgaaatcaggcttcgt
atcaaccaaaaagaaagggtcctcattaccactctcactaaaaaaatgtcagaagatttg
actgactattataaagaagtgggtctaaagatcgcttatttacattcggaaattgatact
atcgaaagaactgaaatcattcgggacttacgaaagggagtttacgattgtattgtcggg
atcaatttgttacgtgaaggtttggatattcctgaagtttcgcttgttgccatcttagat
gctgacaaagagggtttccttcgaaattataaatcactcgtccaaaccattggtcgtgcc
gcaaggaacgtaaacggaaaagccatcctctatgcagatcgtatgactgattccatcaaa
aaagcgatgagtgaaacagaacgtcgtcggttgatccaagaagcacataatgagaaaatg
gggatcacaccacagacaattcaaaaagaaattcatgatatccttccaagagagatggca
gaagaggatagcaaagaagaagcattaaaagatttagaaaaagaatttaccttgaagaaa
tacaaaaccaaagacaagttacgtgaagctttgaaacgtgagatgttacgttacgcaaat
gacatggattttgagaaggcggccatgtttcgtgataaaatgttagcacttggcccagac
aaaattgaaacataa
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