Leptospira biflexa serovar Patoc Patoc 1 (Ames): LBF_1122
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Entry
LBF_1122 CDS
T00712
Symbol
topA
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lbf
Leptospira biflexa serovar Patoc Patoc 1 (Ames)
Brite
KEGG Orthology (KO) [BR:
lbf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbf03032
]
LBF_1122 (topA)
03400 DNA repair and recombination proteins [BR:
lbf03400
]
LBF_1122 (topA)
Enzymes [BR:
lbf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LBF_1122 (topA)
DNA replication proteins [BR:
lbf03032
]
Prokaryotic type
DNA Topoisomerases
LBF_1122 (topA)
DNA repair and recombination proteins [BR:
lbf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LBF_1122 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
zf-C4_Topoisom
Motif
Other DBs
NCBI-ProteinID:
ABZ93646
LinkDB
All DBs
Position
I:1215499..1217376
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AA seq
625 aa
AA seq
DB search
MVVATKGHIKDLPPKSYGVDLSNQFEPEYEWLKGKKSLFTTITTKAKKCSLIYIASDPDR
EGEIIAKHCFDELSKLKKPIYRLRLKEITKEELQSQIQKKIGLDQQEIESQIARRVIDRI
FGFEVSPDLWKHLKIPSLSAGRVQSTVLHWICEREKEIQNFSKENYFQLKLIGTLNENPI
ELKYQSKEKLKQEEIQTILNEIQILPDPSRLKNIVLSNLKIKKIKRNPPKAFSTASLLES
SFRALQFDSKKTMRLAQSLFEGKKLHAGETVGLITYMRSDSTRVSESKQDLGEKYLKEHY
PNLLWEGSRNQGKQKKFSQDAHEAITPINPSLSPEQIKSFLTLDEWKLYQLIWERFLTSL
LKPEIGEEIVYEFPIGKHIFEHSFETISDPGFKNFPRPKEKREKISLNAKIGDLFFYESY
SVEEKETEPPQRYTQGKLIQKMEDTGVGRPSTYATILETLKLRKYIVEYKKNIGPSQLGL
KVDSYLFLNFFDLIGESFTKDLESKLDQITDEKASRVKLVANFYDQLKQILKSPRKKMVS
IGKENQSKVKYDTDEKQTLSEKVKNGKGSEKKGNTKNQNQSLTYIENKTCPKCLDGYVKT
KLGKNGKTIYFCSRYPHCDYITYDN
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
ttggttgttgcaacaaaaggtcatatcaaagacctaccacccaaatcttacggtgtggat
ctttctaatcaatttgaacctgaatacgagtggttaaaaggcaaaaaaagtctttttaca
accataaccaccaaagccaaaaaatgttcccttatttacatagcaagtgaccctgacaga
gaaggggaaattatcgccaaacattgtttcgatgaactttccaagttaaaaaaacctatt
tatcgtttgcgattgaaagaaatcacaaaagaggaattacagtcgcaaattcaaaaaaaa
attggtcttgatcaacaagaaattgaatcacaaattgcaaggcgagtgatagaccgaatc
tttggatttgaagtatctcccgatttatggaaacatttaaaaattccatcactttccgca
ggacgggtccaatcgaccgtattacactggatttgtgaaagggaaaaagaaatccaaaac
ttttccaaagagaattatttccaactcaaattgattggtacgctcaatgagaatccaatc
gaactcaaataccaatccaaagaaaaactaaaacaagaagaaatacaaactatcttaaat
gagatccaaatattaccggatccgtcccgattgaaaaatatagttttatccaatctcaaa
attaaaaaaatcaaacgaaaccctccgaaagcattttctactgcaagtttactcgaatca
agttttcgtgccctacaatttgattctaaaaaaacaatgcgactggctcaaagtttattc
gaaggtaaaaaacttcatgcaggtgagacagtaggtctcatcacgtatatgcgttcggat
agcaccagggtatcggaatcaaaacaagacttaggtgagaagtatctaaaagaacattat
ccaaacctgttatgggaagggagtcgtaaccagggaaaacaaaaaaagttttcacaggat
gctcacgaagcaatcactccaatcaacccaagtctttcgccagaacaaatcaaatcgttt
ttaacattggatgaatggaaattgtatcaattgatttgggaaaggtttttaacctcactt
ttgaaaccagaaattggagaagagatagtatatgaatttccaatcggaaaacatatcttt
gaacattcatttgaaacgatatctgatcccggattcaaaaattttccacgtcccaaagag
aaacgtgaaaaaatctcgttgaatgcaaaaataggagatctctttttttatgaatcatac
tcagttgaggaaaaagaaacagaaccaccacaacgatacactcaaggaaaattgattcaa
aaaatggaagacaccggagtgggtcgaccatcgacttatgcgactatcctcgaaactttg
aaattgcgaaagtacattgtggagtacaaaaaaaacatcggcccctcccaacttggtttg
aaggtggattcttatttgtttttgaatttttttgacttaatcggtgagtcatttaccaaa
gacctagaatcaaaattggaccaaatcacagatgaaaaagcatcacgagtgaagcttgtg
gctaatttttatgatcaattgaaacaaattctaaagtctccacgaaaaaaaatggtaagt
ataggcaaagaaaatcaatccaaagttaaatatgatacggatgaaaaacagacactttcc
gaaaaagtaaaaaatggcaaagggagtgagaagaaaggtaacactaaaaatcagaaccag
agtctaacttatattgagaataaaacttgccccaaatgtttggatggatatgtgaaaacc
aaactagggaaaaatggaaaaaccatttatttttgttcccgttacccgcactgtgactac
atcacctatgataactaa
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