Leptospira biflexa serovar Patoc Patoc 1 (Ames): LBF_1231
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Entry
LBF_1231 CDS
T00712
Symbol
gcpE
Name
(GenBank) Deoxyxylulose biosynthesis protein
KO
K03526
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:
1.17.7.1
1.17.7.3
]
Organism
lbf
Leptospira biflexa serovar Patoc Patoc 1 (Ames)
Pathway
lbf00900
Terpenoid backbone biosynthesis
lbf01100
Metabolic pathways
lbf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lbf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LBF_1231 (gcpE)
Enzymes [BR:
lbf01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.1 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
LBF_1231 (gcpE)
1.17.7.3 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
LBF_1231 (gcpE)
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Motif
Pfam:
GcpE
GcpE_C
Zn_ribbon_9
Sgf11
Motif
Other DBs
NCBI-ProteinID:
ABZ93753
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All DBs
Position
I:complement(1345389..1347416)
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AA seq
675 aa
AA seq
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MSTKYNESPFFYRRRPTREVKVGDVGIGGKNPIRVQSMITSNTRDTDASIQQIMDLERAG
SEIVRLTVPSQADADNLPNIRKKMKELGLKVPLVADIHFTPQVALKCVEWVEKVRINPGN
FADKKKFEIIEYTDNDYHEELARIEEVFTPLVLRAKELGVAMRIGTNHGSLSDRIMNRFG
DTPLGMVESALEFIRIAEKNSYRDIVVSMKASNPQVMIQAYRMLVARFYDLGMDYPLHLG
VTEAGDGKDGRIKSAIGIGSLLEDGLGDTVRVSLTEDAIHEIPVAKELVRKYNDLFFASL
TTKENSIPKEREIIYTEFRDPYQYSRFYSKELMIGESKIGDSNPVRIESCFPFFGEGTEE
EVLHLIQRGAKSGRVPELMHFQINSELDLLSLGTMTRRGSFPLPVSVSLSEELLYQYDAL
AEDLYRFQKWVISPSLFLKESEESWDDLLQFVSRFAKDKRSVEWTFSSTHIEQATVVLKE
CKKRKIENILFSVSDGDLLSLRKLACLLQESDYPIVLNVSAKNKDQLMYDASIKAGGSLL
DGIGDVIRLSFGDGEAEECLHLSFDILQATRLRLTKTEYISCPSCGRTMFDLQSTTAKIK
EKTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGVGKVHLYKGKEIVKKGVSETEAPDL
LIELIRENGMWNDPA
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaaatataacgaatcaccatttttctacagaaggcgtcccactcgggaagtg
aaagtgggagacgttggaatcggagggaaaaaccccatccgtgtccaatccatgatcaca
tctaacacaagagatacggatgcaagtatccaacaaattatggatttggaaagagctggt
tcagagattgttcgcctaacagttcccagccaagccgacgcagataatttgcccaatatt
cgaaaaaagatgaaagaactcggattaaaagtccctcttgtggcagacattcacttcaca
ccacaagttgccttaaaatgtgtggaatgggtagaaaaggtgcgaatcaacccaggaaac
tttgctgacaaaaaaaaatttgaaatcatcgaatacacagacaatgactatcacgaagaa
ctggcaaggatagaagaagtattcactcccctagtcctccgagccaaagaattgggagtg
gcgatgcggattggaaccaaccatggaagtttatccgaccggatcatgaaccgatttgga
gacactccccttgggatggtggagtctgctttagaattcattcggattgccgaaaaaaat
tcttatcgtgacattgttgtttccatgaaggcatccaatccccaagtgatgatccaagcc
tatcgtatgttagtggctcgtttttatgatttaggaatggattatcccttacatttaggt
gtgacggaagcaggggatggaaaagacggaaggattaagtctgccattgggattggaagt
ttacttgaagatggacttggtgatacggttcgagtgtctctcacagaagatgccatccat
gaaatccccgttgccaaggaactggtccgcaaatacaatgatctcttttttgcatcgctt
acgacaaaagaaaattctatcccaaaagaaagggaaatcatttatactgagttcagagac
ccttaccaatactcacgcttttattccaaagaacttatgattggcgaaagtaaaatcgga
gactcaaatccggtgcgaatcgaatcttgttttcctttttttggcgagggaaccgaagaa
gaagtcctccatctcatccaaaggggcgccaaatcaggccgtgttcctgaactcatgcat
ttccagatcaattccgaattggatttactctctcttgggacgatgacaagaagaggttct
tttcctttgccggtttctgtttcactttccgaggagcttctctaccaatatgatgccctt
gcagaagacttgtaccgattccaaaaatgggtaatttcaccatctctatttttgaaagag
tctgaagaatcttgggatgaccttttacagtttgtgtcccgatttgctaaagacaaacgt
tcggtggaatggactttttcatccactcacatagaacaggcgactgtagttttaaaagaa
tgtaaaaaacgaaaaatcgaaaatattttattttctgtgagtgatggagaccttctctca
ttacgaaaacttgcctgccttttgcaagaatcagattaccctattgtattgaatgtttct
gcaaaaaacaaagaccaattgatgtatgatgcctccattaaagccggaggaagtttactc
gatgggattggagatgtcatcagactttcttttggtgatggagaggccgaagagtgtttg
catttgagttttgatattttacaagccacgcgccttcgattgaccaaaacagaatacatt
tcttgtccttcttgtgggcggacgatgtttgacttacaatccacaacggcaaaaatcaaa
gaaaaaaccggccacttaaaaggcgtaaaaattgctgtcatgggttgcattgtgaatgga
ccaggtgagatggcagatgctgattttggttatgtgggggccggggtcggtaaggttcac
ctctacaaaggaaaggaaattgtcaaaaaaggagtctcggaaacagaagctcccgattta
ctcatcgaactcatccgtgaaaatggaatgtggaacgatccagcataa
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