Leptospira biflexa serovar Patoc Patoc 1 (Ames): LBF_1862
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Entry
LBF_1862 CDS
T00712
Symbol
csdB
Name
(GenBank) Selenocysteine lyase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
lbf
Leptospira biflexa serovar Patoc Patoc 1 (Ames)
Pathway
lbf00450
Selenocompound metabolism
lbf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LBF_1862 (csdB)
Enzymes [BR:
lbf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
LBF_1862 (csdB)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
LBF_1862 (csdB)
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Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Alp7A_like_C
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ABZ94368
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Position
I:complement(2011634..2012878)
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AA seq
414 aa
AA seq
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MSLDPYNLRKDFPILSQTMPNGKELVYLDNGATSQKPLSVIQATNDYYVKENANIHRGVY
YLSQHATELFERTRIKTSHFFQAQCAKAIIFTRGTTDAINLVAQTYGRTNVSEGDEIVLS
VQEHHSNLVPWQMLAREKKAFLKFIPILDDTTYDLSKLNEIITKRTKIVAISQMSNVTGT
IHDLTKIIDRARQVGAKVLVDGAQAACHMPIHLVDMDVDFYAFSAHKMLGPTGVGVLFGK
EEILEAMPPWLGGGDMIESVELESSTYAALPAKLEAGTPNIAGVIGFSHALDYLQKVGMK
NIKEHERMLTEYALERMQKIGGLTIFGTEDLEKRGGVVSFTMEGIHPHDVGSILDEEGVA
IRVGHHCCQPLMKQLQIPGTCRASFYLYNTKEDIDVLVHSIEKVKSIFGRVVRK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagatccatacaatttacgcaaagatttcccaatcctttctcaaaccatgccc
aatgggaaagaacttgtttatttagacaatggagctacttcccaaaaaccactctcggtg
atccaggcaacaaacgattattatgtgaaagaaaatgcgaacatccatcggggtgtgtat
tatctttcacaacatgcaacagaactctttgaaaggacgaggattaaaacatcccatttt
ttccaagcacagtgtgcaaaggccattatatttacacgtggaacaacggatgccatcaac
ttagtggcacaaacttatggacgcaccaatgtttctgaaggtgatgaaattgttttatct
gtccaggaacatcattccaatttggttccttggcaaatgttggcccgtgaaaaaaaagca
tttttaaaattcattcctatccttgatgacacaacatacgatttatcgaagttaaatgaa
atcatcaccaaacgcacaaaaattgttgcgattagccaaatgtcgaacgtcacaggaact
atccatgacctaaccaaaatcattgatcgggcgcgccaagtgggtgccaaagtacttgta
gatggagcgcaggctgcttgccatatgccaatccatctagtggatatggatgttgatttt
tatgccttttccgctcacaaaatgcttgggccaacgggagtaggtgtccttttcggtaaa
gaagaaatattagaagccatgccgccttggttaggtggtggagatatgattgagtctgtc
gaattagaaagttccacatatgcagccttacctgcgaaattagaagccggaactcctaat
attgcgggtgtcattggtttttcacatgcacttgattatctacaaaaagtgggaatgaaa
aacatcaaagagcatgaacgaatgttaaccgaatatgcattggaacgaatgcaaaaaata
ggtggacttacgatttttggtacagaggatttagaaaaacgtggaggagtggtttccttt
actatggaagggatccatccgcatgatgtaggatccatactcgacgaagaaggtgttgcc
atccgtgtgggacatcattgttgccaacctttgatgaaacaattacaaatccctggaacc
tgtcgcgcttccttctatttgtacaatacaaaagaagacatcgatgtattagtccattca
atcgaaaaagtgaaatcgatatttggtcgtgtcgtcagaaaataa
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