Leptospira biflexa serovar Patoc Patoc 1 (Ames): LBF_2013
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Entry
LBF_2013 CDS
T00712
Symbol
uvrD-3
Name
(GenBank) DNA/RNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lbf
Leptospira biflexa serovar Patoc Patoc 1 (Ames)
Pathway
lbf03420
Nucleotide excision repair
lbf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LBF_2013 (uvrD-3)
03430 Mismatch repair
LBF_2013 (uvrD-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbf03400
]
LBF_2013 (uvrD-3)
Enzymes [BR:
lbf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LBF_2013 (uvrD-3)
DNA repair and recombination proteins [BR:
lbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LBF_2013 (uvrD-3)
MMR (mismatch excision repair)
Other MMR factors
LBF_2013 (uvrD-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABZ94513
LinkDB
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Position
I:complement(2160667..2162682)
Genome browser
AA seq
671 aa
AA seq
DB search
MKLNAAQMEAVSTIQGPLLVFAGAGSGKTRVITNRIAHMVEGVKIPASKIVALSFTNKSA
KEMAERLRKMVPREKLKGITLSTFHSLGLKILKEHIGKLGYNETFLLFNGTDQEAFVSDL
LKSKRLDPKKVPPREILRRISYAKNTQVHPKDNGLTGEFDLVAAEIFPLYEDGLKEKNAI
DFDDLILLPKRLLAEFPEIAAYYQRKHEYFLVDEFQDTNQLQYEFLSLFRGNSDNLCVVG
DDDQSIYAFRGSNVQLILNFEREFPHAKVVRLLENYRSTSLIIQAANSLIQNNIGRKEKT
LYSRIPSAERVEYYETADEREEAIFVAGRIQTLLIKNEFKGKEIAILFRTNFQSRPFEEE
LRNRSIPYKVVGGYNFFDRKEIRDCISYLRYVANPKDDYSLLRIINYPKRGIGPGTMQKL
QEEAFTHKLSLYEIFHKMIESPDYLPEVKAKVRQEIYQFVEMVDAFKKKFAMSQKLAPVL
REMITQIGFEREISMEETEEKVVKARIYNLSELVNMLSFFEEEEGREGKATIFDFLQRLV
LLMEDEPKEDEEDRRVQLLTMHQSKGLEYDLVFLVGLEEGILPNSRVIEEEGEVVDEERR
LLYVGMTRPRRKLYLTSARTRRKFGEQIESAPSRFLNELSQDAVLFFPMETKDRDTETKN
FLEELDKLKVG
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgaatgcggcacaaatggaagcagtctctaccatccaaggccctcttcttgtc
tttgctggggcagggtcagggaaaacgagggtcatcaccaaccgcatcgcacatatggtg
gaaggggtcaaaatcccggcgagtaaaattgttgccctttccttcaccaataaaagtgcc
aaagagatggcggaacgccttcggaaaatggtccctcgggaaaaactgaaagggatcaca
ctttccacctttcattcgttaggtttaaaaatattaaaagaacatatcggaaaactaggg
tataacgaaacctttttactcttcaatggaaccgaccaagaagcctttgtttccgacctt
ttaaagtccaaacgacttgatcccaaaaaagtccctcccagggaaattttacgccggatc
tcctatgccaaaaacacacaagtccatccaaaagataatggtctcacaggagagtttgac
cttgtagccgcagaaattttccctctctatgaggatggcttaaaagaaaaaaatgccatt
gactttgatgatttgattttacttccgaaacgtctgcttgctgaatttccagagattgct
gcctattaccaaaggaaacatgaatacttcctagtggatgaattccaagacacgaaccaa
ttgcagtatgaatttttatctctctttcgtggcaatagtgataacctttgtgtggtgggg
gatgacgaccagagtatctatgccttccgcggttccaacgtacaactcattttgaatttt
gaaagggaattccctcatgccaaagtggtgaggcttctcgaaaattaccgttccacatcc
cttatcatccaagccgccaactccctcatccaaaacaacattggccgaaaggaaaaaact
ctctatagccggatcccttccgccgaacgcgtggaatactatgaaacggcagatgaaagg
gaagaagcgatttttgtggcaggaaggatccaaactctcctcatcaaaaacgaattcaaa
gggaaagagattgccatcctatttcgaacgaacttccaatcccgaccttttgaagaggaa
cttcggaaccgaagcattccgtacaaggtagtgggtgggtataatttttttgaccgaaag
gaaatcagggattgtatctcgtatcttcggtacgtcgcaaacccgaaagatgattattcc
ctccttcggatcatcaactatcccaaacgtgggattggtccagggaccatgcaaaaactc
caagaagaggcatttacgcataaactctctctctatgaaatctttcataaaatgattgag
agtcctgattatttgcccgaagtaaaggctaaggtcagacaagaaatttaccaatttgtc
gaaatggtagatgccttcaaaaaaaagtttgcgatgtcgcagaaattggcccctgtgctt
cgggagatgatcacccaaattgggtttgaacgggaaatctccatggaagagaccgaggaa
aaggtggtgaaagcccggatctacaacctgagtgaacttgtgaacatgttgtcctttttt
gaagaggaagagggcagagaaggaaaggccaccatctttgacttcttgcaaaggctcgtt
ctccttatggaagacgaacccaaagaagacgaggaagaccgtcgggtgcaacttctcacg
atgcaccagtctaaaggactcgaatacgatttagtatttttagtgggactagaagaggga
attttaccgaactcacgtgttatagaagaagaaggggaagtggtcgatgaagaacgacgc
cttctctacgtgggtatgactcgcccaagacgaaaattgtacttgacttcggctcgtaca
agacgcaaatttggggagcaaatcgagagtgccccctctcggtttttaaacgagctgtct
caggacgctgttctttttttcccgatggaaacgaaggatagagacacagaaactaagaat
ttcttagaggaattagacaaactaaaggtaggctaa
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