Leptospira biflexa serovar Patoc Patoc 1 (Ames): LBF_2082
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Entry
LBF_2082 CDS
T00712
Name
(GenBank) Superfamily II DNA and RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
lbf
Leptospira biflexa serovar Patoc Patoc 1 (Ames)
Pathway
lbf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LBF_2082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbf03019
]
LBF_2082
Enzymes [BR:
lbf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LBF_2082
Messenger RNA biogenesis [BR:
lbf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LBF_2082
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ABZ94579
LinkDB
All DBs
Position
I:complement(2233540..2235129)
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AA seq
529 aa
AA seq
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MKFNELPFHESLSKALDKIGYVELTPIQAKSIPFAMEGNDLTGLAQTGTGKTMAFLLPTL
HRLLSAEEEEALPYALVLAPTRELTIQIAEEAKKLLEFTDLGVATIIGGTDYKSQEQALG
NKACIIVATPGRLIDFVKNHGLSLENIKVVILDEADRMFDMGFVQDLKYIFHKCKNRKQS
LLFSATLSYEVVRLASKYLNDPIEVHINPEKVITERIDQSLLHLGREEKLPYLVNSLLNY
PIEGLGIIFTNYKMNIPKIVSALRRFGITATGLSSELDQKKRIRLLRDFKAGKYKYLIAT
DVASRGIDIENIDVVYNYDLPQDAENYVHRIGRTARAGRKGQSIGFCSETDYTELERIEK
YLNSKIPVAEIREEYLEFPKGEFTPVFADEVIPGEKKYQDRERGGRGGKPRQGERGERGS
GEHRSGDRNRHKGKTGGGHPPAKMSHPGGHPHQTGPEHKHPAKMTHHELKHGHQPKEGKG
KPHNRKNEQKKSFQKNDPRRNLFDINEVKQSKKQKQSIWKSILSFFKKD
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaacgaattaccctttcacgagtctctctctaaagcacttgataaaatcggc
tatgtagaactcactcccatccaagccaaatccatcccgttcgccatggaaggcaatgac
ctcacaggtcttgcccaaaccggaactggaaaaacaatggcctttttacttcccactctg
cacagacttctctccgcagaggaagaggaagcacttccctatgcacttgtccttgcaccg
acaagagaacttacgatccaaatcgcagaagaagcaaaaaaattactcgagttcacagac
cttggagtagcaaccatcatcggaggaaccgattacaaatcccaagaacaggcacttggc
aacaaagcttgtatcattgtcgcaacgccaggacgactcattgattttgtgaaaaaccat
ggtctctctttggaaaatatcaaagtggtgatcctggatgaagcggacagaatgttcgat
atggggtttgtccaagacctgaaatacatctttcacaaatgtaaaaatagaaaacaatcc
cttctctttagtgccacactcagttacgaagtggtaaggcttgctagtaagtatttgaat
gatccgattgaagtccatatcaatccggaaaaagtcattacagaaagaatcgaccaatct
ttactccacttaggaagagaagaaaaactcccttacctcgtcaattccctgttaaactat
ccaatcgaaggcctaggaatcatttttaccaactacaaaatgaacatccctaaaattgta
tcggcccttcgtcgctttgggatcacagcaactggtctttcttccgaacttgaccagaaa
aaacgaatccgactgcttcgtgattttaaagcagggaaatacaaatacctcatcgcaacc
gatgtagcttcccgtgggattgacattgaaaatatcgatgtggtttataattacgaccta
ccacaagatgctgaaaattatgtacaccgcatcggtcgtactgcacgtgcgggaaggaaa
ggacaatccattggattttgttccgaaaccgattatacagaactggaacgcattgaaaaa
tacctaaactccaaaatccctgtcgcggagatacgagaagagtatttggaattccctaag
ggtgagttcactcctgtcttcgcagatgaagtgatccctggtgaaaaaaaataccaagac
cgcgaacgaggtggtcgtggtggaaaaccaaggcaaggggaaagaggcgaacgtgggagt
ggcgaacacaggtcaggtgacaggaatcgtcacaaaggcaaaacgggaggtgggcaccca
ccggcaaagatgtcccatccaggtggccatcctcaccaaacaggacctgagcataaacac
ccagccaaaatgacccaccatgaattgaaacatggtcaccaaccaaaagaagggaaaggc
aaacctcacaatagaaagaacgaacaaaaaaaatcattccaaaagaatgaccctagacga
aatctcttcgacatcaacgaagtgaaacaatcgaaaaaacagaaacaatcgatttggaaa
tcaattctttcttttttcaaaaaagattaa
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