Leptospira biflexa serovar Patoc Patoc 1 (Ames): LBF_2837
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Entry
LBF_2837 CDS
T00712
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lbf
Leptospira biflexa serovar Patoc Patoc 1 (Ames)
Pathway
lbf03030
DNA replication
lbf03430
Mismatch repair
lbf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBF_2837 (dnaE)
03430 Mismatch repair
LBF_2837 (dnaE)
03440 Homologous recombination
LBF_2837 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbf03032
]
LBF_2837 (dnaE)
03400 DNA repair and recombination proteins [BR:
lbf03400
]
LBF_2837 (dnaE)
Enzymes [BR:
lbf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBF_2837 (dnaE)
DNA replication proteins [BR:
lbf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LBF_2837 (dnaE)
DNA repair and recombination proteins [BR:
lbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LBF_2837 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
HHH_3
GnsAB_toxin
PH_10
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ABZ95312
LinkDB
All DBs
Position
I:complement(3041794..3045315)
Genome browser
AA seq
1173 aa
AA seq
DB search
MTLLCHQAMEDFAHLHLHTTYSMLDGAIRISDLMKRVKELGMSSVAITDHGNMYGAIEFY
KEAVKHEVKPIIGCEFYVTPSRSAETELDEIADGGAYHIILLCKNEVGYQNIIKLASRSF
TEGFYRKPRIDYDLLERHSEGLVCLTACLAGEVNRKILEGKEDKAYALAGRLHEIFRKED
FYLEIQDHGIPEQKTVAEAVIGFSKRTGIPLVLTNDSHFLTKDDREAQDILLRIGMRKNI
DDEMRFGFNQNFYVKSPEEMKTLFPNHLDAYYNTLAIRDKCSLNFQFGNPLLPPFEVPPG
FDTDSYLEKLVWEGIQEKYKEITPIVKERTEFEMQTIRNMHFAGYFLIVQDYINFARRTG
IPVGPGRGSAAGSIIAYALGITNVDPIRYNLLFERFLNPDRKDMPDIDTDFCVERREEVI
NYIKHRYGENRVGQIITFGSLAAKAAIKDVARVFNVPFSEVNEMSKLFPKKLGITIQEAV
ETSKDLRDIAEKSELNKKVFSIAQKLEGNYRQVGRHAAGVVIAPTALEEIVPLSTVSEPG
RDGRSIVTQYDKNMSEQVGLIKMDILGLKNLTTIHHATKLIEKRHGILIDLDKIPLDDPA
TFSLLRKANVLGIFQLDSSSGIRDLFAKAQVQKFEEIAALLALYRPGPMGSGMLDDYLDR
KNGKKKVVFPHESLAEVLGETYGVIVYQEQVMGISRIMGGFSVGDSDVLRKAMAKKDKSK
LPALKEKFVKGAIEKKINEKLATELFEQLEKFGEYGFNKSHSVAYAFVTYQTAFLKANYS
IEYLTALLSGDHSKITDVVKYINNAKEMGIRILGPDVKESGISFEITDDTTVRFGLSSIK
GVGELAAQNIIHNRNELGGYKQLSDFTKKLDTRLANKKVLESLAQGGAFDSFGYSRKTIS
ESTDIILNYANKKQAEEKEGQFSLFGGVNGGSEENLNLPKDGIEWNDDELLRREKETTGL
YLSGHPLDKFTEQLKSLNPTSIENLEEVRPKSKVEIAGVLSKKVVKLTKKKEEFVNFMLE
DQTGEIECVAFPKTYAEFKHLFTEDNTVFIKGILERIDADESELKGQIIVNKLEELNSVT
IEKKMEKTLHLTINMKEEKNRDVILKLQDILSVHRGASSVFFHLVGNGDEKKVIRAHDHF
SIEITTDLMKMLTDILGKGAVRYTVGEEVRVYG
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
ttgactttactatgtcaccaagccatggaagattttgcccacctgcatctgcacactacc
tattccatgttggatggtgccatacgaatcagtgatttgatgaaacgtgtgaaagaactg
gggatgagttccgtcgccatcactgatcacgggaacatgtatggtgcgatcgagttttac
aaagaagcagtcaaacatgaagtcaaacccatcatcggttgtgaattttatgtaacacct
tcgagaagtgcagaaaccgaacttgatgaaattgcagatggtggtgcttaccatatcatc
ttattatgtaaaaacgaagttggataccaaaatatcatcaaactggcaagtcgttccttt
acagaaggattttatcgaaagccacgtattgattacgatctgttggaacgccacagtgaa
ggcctagtctgtttaacagcatgccttgctggagaagtgaacagaaaaattctggaaggg
aaagaagacaaagcgtatgcgttagctggtcgactccatgaaatctttcggaaagaagat
ttttatttggaaatccaagatcatggaatcccagaacaaaaaacagtggcggaagcagtc
attggtttttcaaaacgaactggtatccctttggtgctaaccaacgattcacacttctta
acaaaagatgatagagaagcgcaagacattctattgcgaattggaatgcgcaaaaacatc
gatgatgaaatgcgatttggatttaatcaaaatttttatgttaaatctcctgaagagatg
aaaactctttttcccaatcatttagatgcttattataatacactcgccattcgcgataaa
tgttctctcaatttccaatttggaaatccattactcccaccatttgaagtaccaccaggt
tttgacacagacagttatttagaaaaattggtttgggaagggattcaggaaaaatacaag
gagatcacgcccatcgtcaaggaaaggaccgaattcgaaatgcaaaccattcggaatatg
cattttgccggatactttctcatagttcaagattatatcaattttgcaaggcgcacgggg
attccagtgggacctggtcgtggttcggctgcaggttccatcattgcctatgcacttggg
atcacaaacgttgatccaattcgttacaatttactcttcgaacgatttttgaatcccgat
cgaaaggatatgcctgatattgatacggatttttgtgtggaacgacgagaagaagtgatc
aattacatcaaacaccggtatggtgaaaatcgagttggtcaaattatcacttttggttcc
ttagctgcaaaagcagcaatcaaagacgttgcccgtgtcttcaatgttccgttctctgaa
gtaaacgaaatgagtaagttgttcccaaaaaaattgggaatcaccatccaagaggctgtt
gaaacatcaaaagatttacgtgatatcgctgaaaaatctgaattaaataaaaaagtattt
tcaattgcacagaaactagaaggtaactatcgtcaggtgggaagacatgcggcaggtgtg
gtgattgcgccaactgccctggaagaaattgtcccactatcaaccgttagtgaaccaggc
cgtgatggtcgatccattgtcactcagtacgacaaaaatatgtcggaacaagtggggctg
atcaaaatggatattttaggtttaaaaaacttaacaaccatccatcacgcaacaaaactc
attgaaaaacggcatggaatactaattgatttagacaaaatccctttggatgatccggcc
acctttagtttgttacggaaagcaaatgttctgggtatatttcagttggattcttcttca
ggaattcgagatctttttgccaaagcgcaagttcaaaagtttgaagaaattgccgcctta
cttgcattatatcgtcctggtccgatgggatctgggatgttggacgattatttagatcgt
aaaaacggaaagaaaaaagtagtattcccacatgaaagtttagctgaggttttgggtgaa
acatatggtgtaattgtttaccaagaacaggtaatgggtatctcaaggattatgggtgga
ttctctgtaggagactcggatgttctccgtaaggcgatggccaaaaaagataaatccaaa
ctccctgcactaaaagaaaaatttgtaaaaggtgccattgaaaagaaaatcaatgaaaag
ttggcaaccgaactctttgaacagttggaaaaattcggtgagtatggatttaataaatcc
cactcggttgcttatgcctttgtgacataccaaactgccttcttaaaagcaaattattcg
atcgaatacctaactgcattactttcaggagatcattccaaaatcacggatgttgtgaaa
tacatcaataatgcaaaagagatgggaattcgtattcttgggcctgatgtaaaagaatca
ggaatttcttttgaaatcactgacgatacaactgtacgttttggcctatcgtctatcaaa
ggtgttggagaacttgccgcacaaaatatcattcataatcgaaatgaacttggtggttac
aagcaactgagtgattttacaaaaaaactcgatactcgattggccaataaaaaggtatta
gagtcactcgcacaaggtggtgcgtttgattcctttggttattccaggaaaaccatatcc
gaatccactgatatcattctcaactatgcaaacaaaaaacaagctgaagaaaaagagggc
caattttctctgtttggtggtgtaaatggtggatcggaagaaaacttaaatttaccaaaa
gatggaattgagtggaatgatgatgaacttcttcgacgagagaaagaaacaaccggtttg
tatttatccggccaccctctggataaattcactgaacaactaaaatctctaaatccaact
tccattgaaaacttagaagaagtccgccctaaatcaaaagtggaaattgctggtgttcta
tccaaaaaggttgtcaaactcacgaagaaaaaagaagaatttgtaaactttatgttggaa
gaccaaacaggtgagattgaatgcgtcgcgtttccgaaaacttatgctgaattcaaacat
ttgttcacggaagacaacactgtttttatcaaagggattttggaacgaattgatgccgac
gaatcagagttaaagggccaaattatcgtaaataaactcgaagaattaaactctgtcacc
attgaaaagaaaatggaaaaaacactccatttgacaatcaatatgaaggaagaaaaaaac
agagacgtgattttaaaactccaggacatcctttccgttcataggggtgcctcatcagta
ttttttcacttagtgggtaatggtgacgaaaaaaaagtaatccgtgctcatgatcatttt
tccatcgaaatcacaactgatcttatgaaaatgttaacggatattttgggaaagggagca
gttcgttacacagtaggggaagaagtgagagtatacgggtaa
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