Leptospira biflexa serovar Patoc Patoc 1 (Ames): LBF_5018
Help
Entry
LBF_5018 CDS
T00712
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lbf
Leptospira biflexa serovar Patoc Patoc 1 (Ames)
Pathway
lbf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LBF_5018 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbf03400
]
LBF_5018 (recD)
Enzymes [BR:
lbf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LBF_5018 (recD)
DNA repair and recombination proteins [BR:
lbf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LBF_5018 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
PhoH
SH3_13
UvrD-helicase
NAT10_TcmA_helicase
AAA_22
UvrD_C
DEAD
AAA_12
nSTAND3
NPHP3_N
Pfg27
SLFN-g3_helicase
SPO22
AAA_28
NB-ARC
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ABZ96109
LinkDB
All DBs
Position
p74:complement(16746..18548)
Genome browser
AA seq
600 aa
AA seq
DB search
MKVIDEKIQSFLNSLYKLFPDWDTSLKDTIASLLVQSQSGDLYLPITDDTTIDKMKDYFP
FVIERTGKENRLYLQKSHSEKRNFESLLFTFLNHKTNQTKNTTITADQIKTIISGLETES
KIKLAEEQRETIQDVITSNFRVISGGPGTGKTTVVSFILMAFDRLKLLPSMERIALVAPT
GRASQRLTESIQRNLEKFQADPSLTSNFRGQTIHNLLKINPTTNQAKFGEKRYLPYDFII
MDETSMVDLKLMNLFFSAIHFDTHIILLGDPNQLPSVGQGEVLTDLITTLKNKKEFLSEL
NSNHRFSNDSEFSVFAEIVKQSFDTNSNTKPFPLPKMITKSDLNLKHDFVWIQGDKKTKS
TNGNHPEIHDWNIESMVPFLWETFYLHTANKTSKFHWEPNALKDPKNKFIFESIVNEYRC
LTILRNGYFGIEAIQGQILRYAKKQLTNPKNEFHLKYRQLSKSFYFEGMPIIIQSNDPMR
KLFNGDIGLVVSIHSELRAVFPIEDRLYSFALDTLPDHEPAFFLTIHKSQGSEYKSILLY
LPPMNVLDVDSENNLSILNRRILYTAITRAKERVILLGDFQTWEFGLQSFRKRYTGIHIP
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgatcgatgaaaaaatccaatcgtttctaaattcgttatacaaacttttccca
gattgggatacgtcgctaaaagatacgattgccagtttacttgtccaatcacaaagcgga
gatttgtatcttcccataacagatgacacaacaatcgataaaatgaaagattatttcccg
tttgtgattgaaagaacaggaaaagaaaaccgattgtatctgcaaaaaagtcattccgaa
aaaaggaatttcgaatctctactcttcacattcttaaaccacaaaacaaaccaaacaaag
aatacaacgatcaccgcagatcaaatcaaaacgattataagtggtttagaaacagaatca
aaaatcaaactggcagaagaacaaagggaaacgattcaagatgtgatcacatccaatttc
cgtgtgatctctggtggcccagggacaggaaaaactacggttgtatcctttatcttaatg
gcattcgatcgattgaagttactaccttcgatggaaaggattgccctcgtcgcgccaaca
ggaagagcttcgcaaagattaacagaatccatccaaaggaatttggaaaagtttcaagcg
gatccttctctgacttccaatttccgtggacaaaccattcacaatttattaaaaatcaac
ccaacaaccaaccaagccaaatttggagaaaaacgttatctaccctatgatttcatcatc
atggatgaaacctcgatggttgatttaaaattaatgaatttatttttttcggcgatccat
ttcgatactcatatcattctcctcggtgacccaaaccaacttccttccgttgggcaaggt
gaagtattaacggatctcatcaccacgttaaaaaataaaaaagaatttttatcggaactt
aacagtaaccatcgtttttcgaatgattctgaattcagtgtttttgctgagatcgtaaaa
caatcctttgatacgaatagcaatacaaaaccatttccactaccaaagatgatcacaaaa
tcggatttgaatttgaaacatgattttgtttggatccaaggtgacaaaaaaacaaagtca
accaatggaaaccatcctgagatacacgattggaacatagaaagtatggttcccttttta
tgggaaacattctatttgcacactgccaataagacctcaaaattccattgggaaccaaat
gcactgaaagatccaaaaaacaaattcatttttgagtcgatcgtgaatgagtatcgatgt
ttgacgattctaagaaatggatactttggaatcgaagccatccaaggccaaatcttacgt
tatgcgaaaaaacaattaaccaatccaaaaaacgaattccatctcaaataccgacagtta
tccaagtctttttactttgaagggatgcccattatcatccaatcgaatgacccaatgaga
aaattgtttaatggtgacattggtttagttgtttcgatccattcagagttaagagcagtt
ttccccattgaagatcgattgtattcctttgccttagacacactccctgatcacgaaccc
gctttttttctcaccattcacaaaagccaaggttccgaatacaaatcgatcctactctat
cttcctccgatgaatgttttggacgtagattcagagaacaatctttccatactcaaccga
aggattttgtacacagcaatcactcgcgccaaagaacgcgtgatcttacttggtgacttt
caaacttgggaatttggattacaatcgtttcgcaagcggtatacaggaattcacattcca
tag
DBGET
integrated database retrieval system
