Lodderomyces beijingensis: 92205329
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Entry
92205329 CDS
T10315
Symbol
LODBEIA_P01330
Name
(RefSeq) uncharacterized protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
lbg Lodderomyces beijingensis
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbg03016
]
92205329 (LODBEIA_P01330)
Enzymes [BR:
lbg01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
92205329 (LODBEIA_P01330)
Transfer RNA biogenesis [BR:
lbg03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
92205329 (LODBEIA_P01330)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSEN34_N
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
92205329
NCBI-ProteinID:
XP_066827071
UniProt:
A0ABP0ZCJ0
LinkDB
All DBs
Position
1:complement(319715..320575)
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AA seq
286 aa
AA seq
DB search
MQDADPTIVQTKLDTQTTENASSSASTAQAPQKIILPVISPRHNPEVLLFNVEDIRTLRN
DHHILGLLSGTLPQFPQQNIFLSIPLKLNIYETLWLVKMDVARLVDQLSYRLAKLQSCTQ
TNQVEPGENMVTIPNMDPTGYDHGIARTHEIPTRAYIESYLSNASRRDRRNFKRHFRYYA
FLQDRGFYINPGLKFGGDLVLYPGDPLRYHSYSIVRFEFVDMYEIISGGRLATSVKKNMI
VMGSRDANTREQGGAEDDVTVDDEYVSSLFEDEVPLCFSIEWSGFG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatgccgatccaactatagtgcaaaccaaactagatacccaaacaacggaaaat
gccagctcctcagcttccaccgctcaagcaccgcagaaaattatacttccagtaatatca
ccgcgccacaaccccgaagtcctcctattcaacgtagaagacatcaggactctccgcaac
gaccaccacatcctcggcttgttatcagggacactaccgcagttcccgcaacagaacata
ttcctctcgatcccactcaagctcaacatctacgagacactatggctagtgaaaatggac
gtggcccgccttgtggaccaactatcgtaccgcttggcgaaattgcaatcttgcacccag
acaaatcaagtcgaaccaggggagaatatggtcactatacccaacatggaccccacaggt
tatgatcatgggatagcgcgcacacacgagattccaacccgggcatatatcgagtcctac
ttatccaatgcgtcccgtcgcgaccgccgcaatttcaaacggcatttcagatactacgct
tttttgcaagaccggggtttttacattaaccccgggttgaaattcggtggtgatttggtg
ctttatcccggtgatcccttgcggtatcattcgtattcgatcgtcaggtttgagtttgtt
gatatgtatgagattatcagtggtgggaggttggctactagcgtcaagaaaaatatgatt
gttatgggctcgcgggatgcaaacacacgggaacagggcggggcggaggatgatgtcacg
gtggatgatgagtatgtgctgctgttgtttgaggacgaggtgccgttgtgtttctccatc
gaatggtccgggtttggctaa
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