KEGG   Lodderomyces beijingensis: 92205481
Entry
92205481          CDS       T10315                                 
Symbol
LODBEIA_P02850
Name
(RefSeq) uncharacterized protein
  KO
K14962  COMPASS component SWD2
Organism
lbg  Lodderomyces beijingensis
Pathway
lbg03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lbg00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    92205481 (LODBEIA_P02850)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lbg03019]
    92205481 (LODBEIA_P02850)
   03036 Chromosome and associated proteins [BR:lbg03036]
    92205481 (LODBEIA_P02850)
Messenger RNA biogenesis [BR:lbg03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     92205481 (LODBEIA_P02850)
Chromosome and associated proteins [BR:lbg03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     92205481 (LODBEIA_P02850)
    COMPASS/SET1 complex (yeast)
     92205481 (LODBEIA_P02850)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 EIF3I ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_Vps41 NBCH_WD40 Beta-prop_EML Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_IFT140_2nd Glu_syn_central
Other DBs
NCBI-GeneID: 92205481
NCBI-ProteinID: XP_066827223
LinkDB
Position
1:694296..695432
AA seq 378 aa
MSSSIYAGSRTQFSPSKRPSAVTTNSSSALHITQDALASCRESKFFNYHQGASITSLDFD
DTGQYLISSGIDKSIQLYDCYKGIHYKDIQSQKYGVHSAQFTHEGLNCLYASTPDPTASD
GNENVIRYLSLSTNQYIRYFKGHKAQVSNLEVNPVNNTFMSSSYDGTVKFWDLNTSSATG
SIGTGSNTIAGYDPHGIVVAIGKGPQKDAKLGTVALYDLKTFDRGPFLSAEIPCMPRQLW
NKLEFSNNGRLILVSTDTCEHYILDAFSLKLMAIIRLTYRRDDRWMSTKYPYSGCCCFTP
CGKFVLVGSPKHIVHIFDVSELKQDAEKPTIFSRSADVLKSAHGIPKIVLFNPRLFTFAT
ADVGVSLWQPNSGEKTLP
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgtcatcttcgatatacgccggctcgagaacgcagttttcaccgtcaaagagaccaagt
gccgtcaccacaaactcgagctcggccttgcacattacacaggacgcgcttgcctcctgt
cgagagtcaaaattcttcaactaccaccagggcgcgtcgataacctcgttggatttcgac
gacacgggccagtacttgatctcctcgggcatcgacaagtcgatccagctttacgactgc
tacaagggcatacactacaaagacatccaatcgcagaaatacggtgttcactcggctcag
ttcactcacgaagggctcaattgcctatacgcatcgacgccggacccgactgcttctgac
ggcaacgagaacgttatccgatacttgtccttgtccacgaaccaatacatccgatatttc
aagggacacaaagcccaagtgagtaaccttgaagtgaaccccgtcaacaacactttcatg
agctcaagttatgacgggaccgtcaagttttgggacctaaacacgtcgtcagccacgggg
agcatcggcacgggactgaatacaatcgcagggtacgatccccatggcatcgtggtggcg
attggcaagggcccgcagaaggacgcaaaattgggaaccgttgccctttacgacctcaaa
actttcgacagaggcccattcttaagtgcggaaataccgtgcatgccgcgacagctatgg
aacaagttggagttttcaaacaacgggcgcttgatcttggtgtcaaccgatacttgcgag
cattacatcttggacgcgtttctgttgaaactaatggcaatcatcagactcacctaccgg
cgagacgatcgctggatgtccacaaaatacccctactcgggctgctgctgcttcacccct
tgcggcaagtttgtgttggtggggagcccgaaacacattgtgcacatttttgacgtgagt
gagttgaagcaagatgcagaaaagcccactatcttctctcgctcggctgacgtgctcaag
tcagcgcatggcatccccaaaattgtcctattcaaccccaggttgttcacatttgcaacc
gctgacgtgggtgtatcactttggcaacccaactcaggagagaaaacacttccctaa

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