KEGG   Lodderomyces beijingensis: 92205531
Entry
92205531          CDS       T10315                                 
Symbol
LODBEIA_P03350
Name
(RefSeq) uncharacterized protein
  KO
K15542  polyadenylation factor subunit 2
Organism
lbg  Lodderomyces beijingensis
Pathway
lbg03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lbg00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    92205531 (LODBEIA_P03350)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lbg03019]
    92205531 (LODBEIA_P03350)
Messenger RNA biogenesis [BR:lbg03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     92205531 (LODBEIA_P03350)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 WDR55 WD40_Gbeta EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_IFT122_1st eIF2A PEP5_VPS11_N WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR41 Beta-prop_DCAF4 WDR54 Beta-prop_WDR11_2nd Beta-prop_HPS5 WD40_like Tricorn_2nd VID27
Other DBs
NCBI-GeneID: 92205531
NCBI-ProteinID: XP_066827273
LinkDB
Position
1:810353..812068
AA seq 571 aa
MYANNSSSHGIGRINKPPYNSHARAQVHHQDRSNALHNNSNNNNEQYQSSLDHQLASQEK
KQAFRRITDHGNNMARWYLEKSIGKNTRHQQPIGVIRPESSYLIDLLPTMAYSSSFNRNR
KNNRNNMAILDLETKFVHLSSSKVKHSINTVKWTPEGRRLLVAAHSGEFTLWNGMTFNFE
TIMQAHESPILTMQYSNNDEWLLSGDQNGTIKYWQPNFNNVNNIAAHSNGVRDIAFSPND
SKFLTCGDDSLVKIWNFNNGKEERSLSGHNWEVKSADWHRELGLIVSGSKDNLVKLWDPR
VGECIATLHGFKHTVNTTRFQPCGTKRLLASVSRDRSCRVFDLTTMKDMLVIRDSDTDLS
CLSWHPQHASLLTTAAFNGAINHYLLNSYIPNSNDSIPKRATSNITSQTQSIDAVQKIPF
AHERAIHALEYHPMGHILCSAGSDKSARFWSRARPNDPMSWRDPVYTDEKNGAWYYAVNN
NVNAVMEDPAQAKYAAAAAPDNANVAATTTVTTATAVSDVAGDTSNGAPDAASRSASAAP
NLDASGSGAASGHERKPHLPGLSIPGLSSYS
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgtacgccaataattcatcaagccatggtattgggcgaataaacaagcccccatataac
tcccatgcaagagcgcaggtccatcatcaagaccggtcaaacgcattgcataataatagt
aacaacaataatgagcaatatcagtcgagcttggatcatcagctcgcgagtcaagagaag
aaacaggcgtttcgacggataacggaccatgggaataacatggcacggtggtacttggag
aaatccattggcaaaaacacgaggcaccagcagcctattggcgtgattagacccgaaagc
tcgtatttgatagacttgttgcccaccatggcatactcctcgagcttcaatcgcaacaga
aaaaacaacaggaacaatatggcgattttggacttggagacgaaattcgtgcatttgagt
tcgagcaaagtcaagcatagcataaatacagtcaagtggaccccagaggggagaaggttg
ttggtggcggcgcactctggcgaattcacgttgtggaatggcatgacttttaactttgaa
acaattatgcaagcgcacgagtcgcccatattgacgatgcagtactcgaataacgacgag
tggctattatcgggcgatcaaaatggtactattaagtactggcagccgaatttcaacaat
gtcaacaacattgccgcgcattccaatggtgtgcgcgacattgccttttctcccaacgat
agcaaattcttgacgtgtggagatgactccttggtcaaaatttggaacttcaacaatggc
aaagaagagagaagtttatcgggccacaattgggaggtcaagagtgccgattggcatcgg
gagttggggttgattgtcagtggatccaaggataacttggtcaaattatgggatccgcgc
gtgggcgaatgtatagctaccctccacggcttcaaacacaccgtcaacaccacccggttc
cagccatgtggcaccaagagactcttggcgtcggtgtcgcgagatcggtcgtgtcgagtg
tttgacttgaccaccatgaaagatatgctcgtgattcgtgattccgatactgatctctcg
tgtttgtcctggcacccgcagcacgcgtcgcttttaaccacggccgcgttcaacggggcc
atcaaccactatttgctcaactcgtatatccccaactccaacgactcgatcccgaaacgg
gcaacgtcgaacatcacgtctcaaacgcagtcgatcgatgcggtgcaaaaaatccctttt
gcccacgagcgtgctatccacgcgttggagtaccaccccatggggcatattttgtgttct
gcgggctccgacaaatcggcgcggttctggtcgcgggctaggcctaatgatcccatgtct
tggagggatccagtttacactgacgagaagaatggcgcttggtattatgctgtgaataat
aacgtaaatgccgtgatggaagacccggcgcaggcgaaatacgcggctgctgctgcccct
gataatgccaatgtcgctgctactactactgttacgactgctactgctgtgagtgatgtt
gcgggtgatacaagcaacggggcaccggatgccgcttcgcgtagtgccagtgctgctcct
aatttggatgcatctggatcgggtgccgccagcggccacgagcgcaaaccacatttacct
ggtttaagtataccgggacttagctcatacagttga

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