Lodderomyces beijingensis: 92205554
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Entry
92205554 CDS
T10315
Symbol
LODBEIA_P03580
Name
(RefSeq) uncharacterized protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
lbg Lodderomyces beijingensis
Pathway
lbg04138
Autophagy - yeast
lbg04142
Lysosome biogenesis
lbg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
92205554 (LODBEIA_P03580)
04138 Autophagy - yeast
92205554 (LODBEIA_P03580)
04148 Efferocytosis
92205554 (LODBEIA_P03580)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbg04131
]
92205554 (LODBEIA_P03580)
Membrane trafficking [BR:
lbg04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
92205554 (LODBEIA_P03580)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
Beta-prop_LRRK2
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
92205554
NCBI-ProteinID:
XP_066827296
UniProt:
A0ABP0ZD58
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All DBs
Position
1:complement(855796..858804)
Genome browser
AA seq
1002 aa
AA seq
DB search
MNIDIIEPSTRLKTPFAHGTGSKISSLLQTSEQLFIGSTRGDLLLYDWSSSEQPKQVVSE
RAFSIRSTQNATVKSSSSRSLRSFRSFQDTRHLFGENHGYALQNTFKNLTQDNSSITTIK
LLPIRFGSVEKRIVLIISPVALKIYEIVGSHVNLIFNLNEPRCTATLYLEHDEKRLFFVG
VKRKVLVYHIRNKSRNVLEFNMTKEMQLKDRVRTINVYNENNIIVGVESDYFMINLATHK
MSTFASSDDADISSQGASFKYFGLSATGPSLWTLATGKKSGSGSSSSSSSMMMILIRDTT
VIQLNKNNDDKISASPVKLTTVPLVVLFISPMYLAVVYPKSIEILDLHKGDLIQKFSHYI
NSNQIFAQVEDGVLSVASGSDVFQFTIVALQKQIAQYLNITGKAHSGNARDPSNDLKLIG
LEKAINLVSDLEPSPDNELFTSGKLKQLRLRELYTIKAVSLFDSYSKYHESLVDIASEWL
ISYHDVLSLFPNFLNAELLLYPKTYKIYEDDNSNKTPPPNNIVKKVTKEDLESNPISESE
YETDATRKPAPVPVSVKNTAKSQNIRRFIKAVNNLIIYLTEQRRILSSFQDKSSINWKNV
TLEPMDIYPPVDHQLDVVSTTIDTSLFLCYFYVRPMLLGPLLRLPNNRCNSKIVNECLMS
NIHNHTQQRRLKQPNYIKELLDFYYGRTLHREALKMLYDLAHEEEDVTVKHNNEEDNLYD
DFVRGPGLTVRYLSKLSNDNLDLILDYADWVIDADVGNSRALFMNDSYECESLDNSMVLQ
YLNKKNVELAIEYLEWLLFKSDLIEKFKKSKQFGRYETRLCLLYLEQIKADSAQSHQYYD
SLRELLSSSDTFDPWPVLREIPTTEDKFLRLTVFVFRKLQEHEKAIDVLYNQLNDLDEAI
EYCLNIYYQPNGITTGRSLFHKLLEDLLINCSRNIDEISKLLQSQGHKMSVEYVVKLIPA
SFPLAKLQGFLKNTVVELSNKKKDSQLNSQLYKVGVRRMKRV
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgaacatagacataattgaaccgtcgactcggctcaagaccccgtttgcgcatggcaca
ggaagcaagatctcgtcgttgcttcaaacgagcgagcaattgttcattgggtcgaccagg
ggggacctcctcttgtacgactggagctcgtcagaacaaccaaaacaagttgtttccgag
cgagcgttttcaatcaggagcacgcagaatgccaccgtcaagtcgctgtcctcgcggtcg
ctacgatctttccgctctttccaggacacgagacacttattcggcgagaaccacgggtat
gccttgcagaatacattcaagaatttgacgcaggacaacagcagcatcaccacgatcaag
cttctaccaattcggtttgggtccgtcgagaaacggatagtgttgattatcagccctgtt
gctttgaaaatttacgagattgtcggcagccacgtcaacctcatcttcaatctcaacgag
ccgcgatgtacggccacgctatatttggagcacgacgagaaacgactattttttgttggc
gtcaagcgcaaggttttagtctatcatatacgcaacaagtcgcggaatgtcttggagttc
aacatgaccaaggagatgcagctcaaggatcgggttcgcactatcaatgtctacaacgaa
aacaacatcattgttggggtcgagagcgactactttatgatcaatttggcgacgcacaag
atgtccacgtttgcctcctccgatgacgccgatatttcaagccaaggtgcctcgttcaag
tattttggattgtcggccacgggaccgctgttgtggacgcttgccacgggcaagaaaagt
ggcagtggcagcagcagtagtagtagtagtatgatgatgattttgattcgagacaccacg
gttatccagttgaacaagaacaatgacgacaagatctcggcgtcaccagtgaaactaacc
acggtgccacttgttgttttatttatttcccccatgtacctcgcagttgtgtatccgaaa
ctgattgaaattttggacttgcacaagggcgacttgattcaaaaattcctgcattacata
aactcgaaccagatatttgcccaggtcgaagatggtgtcttgagcgtggcatcgggactg
gacgtattccagtttaccattgttgcgctccaaaagcagattgcccagtacttgaacatc
acgggcaaggcccatagtggcaatgcgcgagaccccagcaacgatttgaagttgattggg
ttggaaaaggccatcaatcttgtgtctgacttggagccgtcaccagataacgagttgttc
accagtggcaagttgaagcagttgaggttgcgagagttgtacaccatcaaggcggtcagt
ttgtttgactcgtactcaaaataccacgagtccttggtggatatcgcttctgagtggttg
atatcctaccatgatgtgctctcgttgtttcccaacttcctcaacgccgagctcttgttg
tatccgaaaacctacaagatttatgaggacgataatagcaacaagacgccgcctcctaac
aatatcgtcaagaaagtcaccaaggaggatttggagctgaatccgatttctgagtccgag
tatgaaaccgacgccactcgcaagcccgcgccagtgcccgtgtccgtgaagaacacagcc
aagctgcaaaatatcaggcggttcatcaaggcagtcaacaatttgattatttatttaacc
gaacagagacggattcttctgctgtttcaagacaagtcctcgatcaattggaaaaatgtc
actctcgagccaatggacatatatccgccggtggatcaccagttggatgtagtgtcgacg
acaattgacacatcgttgttcctatgctatttctacgttcgacccatgcttttgggccca
ctattgcggcttccgaacaatcgctgcaattccaaaatcgtcaatgaatgcctcatgagt
aatattcataatcacacccagcagaggcgattaaagcagcccaactatatcaaggagttg
ttggatttctactatggacgaacgttacatcgcgaagcattgaaaatgttgtacgacttg
gctcatgaagaagaagatgtcacggtgaagcataacaatgaagaggataatctttatgat
gattttgtacgggggccaggattaaccgtgcgatacttgctgaaactctccaacgacaac
ttggacttgattttggactatgcagattgggtcattgatgctgatgtcggaaacagccgc
gctttatttatgaatgactcctatgaatgtgaaagtttggacaactcaatggtgcttcag
tatttgaacaagaaaaacgttgagttggccattgagtatctagaatggctcttgttcaag
agtgacttgattgaaaagtttaaaaaaagcaagcagtttggcaggtacgaaacaaggctt
tgtttattgtacttggaacaaatcaaagcggattcagctcagtcacaccagtactatgac
agcttgagggagctcttgtcctcgagcgacacttttgacccttggcccgtgcttcgagaa
atacccacgacagaggacaagtttctccggctcaccgtttttgtattccggaaattgcaa
gaacacgaaaaggccatagatgtgctttacaaccaacttaatgacttggacgaggcgatt
gagtactgcttgaacatttattaccaacccaatggaatcacgacgggacgcagcttgttc
cataaacttctcgaggatttgctcatcaactgttcacgcaacattgacgagatttccaag
ttgctacaatcccagggccacaagatgtccgtcgaatacgtggtgaagcttatcccggcg
tcgttcccgctagctaaactacaggggtttctcaagaataccgtggtggagttgagtaat
aagaagaaggactcccagttgaactctcagctttataaagttggagtgcgcaggatgaaa
agagtgtag
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