Lodderomyces beijingensis: 92205743
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Entry
92205743 CDS
T10315
Symbol
LODBEIA_P05470
Name
(RefSeq) uncharacterized protein
KO
K12586
exosome complex component RRP43
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
92205743 (LODBEIA_P05470)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbg03019
]
92205743 (LODBEIA_P05470)
Messenger RNA biogenesis [BR:
lbg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
92205743 (LODBEIA_P05470)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
92205743
NCBI-ProteinID:
XP_066827485
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All DBs
Position
1:1332530..1333609
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AA seq
359 aa
AA seq
DB search
MTELKQVTFTPEVLERIAPDVSLQRHLAIGIRPNLRYFHEFKSIEFGNSSQIQQSSANVI
ASSILKSGSTTVINSITLSIVEDLYGGAKLQDYATIYPQVEILRGRSGAPTDEEMILSQD
LFESFRRCRVIPSSNLRITNVGIAVKDDESGAEEIIYPDLDETQWQLANLSNMHDKAFSF
VLHSHIKIYSKQVSTNSLFDLCFASCLKALRELKLPRCYVDDTISTKISIRSRKSNARGT
VDSNRGTLMLDCRDEMRYKLELNASANTVSSNFGVIKKETAKDQDIEMEDGEGAAAAVVM
LTDLEGEAEESSVLSRISIINSAETINKISLVSDGVIDLETLKQAIDASQKRAEFSESL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgacggagttgaaacaagtgacgttcacaccagaggtgctagaacggattgcacccgat
gtgtcactccagcgacatctcgccataggaatcagacccaatctacgctacttccacgaa
ttcaaatcgatcgagtttggcaacagttcccagatccagcagtcgtctgcaaatgtcatt
gcctcgtcgatcttgaaaagcggctctaccacggtgatcaactccatcaccttactgatt
gtcgaagacttgtatggcggcgccaagcttcaagactatgccaccatctacccacaagtg
gagatattgaggggtaggtccggtgctcccacggacgaagagatgattttaagccaggac
ctatttgagctgtttagacgctgccgcgtcataccgctgctgaacctaaggatcacaaac
gtgggcatcgcagtcaaggacgacgaaagcggcgccgaggagatcatctacccggacttg
gatgagacgcagtggcagcttgccaacttgtccaatatgcatgacaaggccttttccttc
gtcttgcatctgcacattaagatctacctgaaacaagtgagcacaaactcgctattcgac
ttgtgctttgcttcgtgcttgaaagcgttgcgcgagttgaagttgccgcgctgctacgtt
gacgataccatcagcaccaagatctccatcaggtcaaggaaatccaacgccaggggaact
gtcgactcaaacagaggcacgttgatgttggattgtagagatgagatgaggtacaaattg
gagctcaatgcgagtgccaacaccgtgtcaagcaactttggcgtgatcaagaaggagact
gctaaagatcaggacatagaaatggaagatggagaaggggcggcggcggcggtggttatg
ttgaccgacttggagggcgaagccgaagaaagtagcgtgttgtcgagaatatccatcatc
aacagcgctgaaactataaacaagataagtttggtgagcgatggcgttatagatctagag
acgttgaagcaagccatcgacgcttctcagaaaagagcagagtttagtgaactgttgtaa
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