Lodderomyces beijingensis: 92205803
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Entry
92205803 CDS
T10315
Symbol
LODBEIA_P06070
Name
(RefSeq) uncharacterized protein
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
92205803 (LODBEIA_P06070)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbg03021
]
92205803 (LODBEIA_P06070)
Enzymes [BR:
lbg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
92205803 (LODBEIA_P06070)
Transcription machinery [BR:
lbg03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
92205803 (LODBEIA_P06070)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Herpes_UL69
Motif
Other DBs
NCBI-GeneID:
92205803
NCBI-ProteinID:
XP_066827545
LinkDB
All DBs
Position
1:1514861..1519900
Genome browser
AA seq
1679 aa
AA seq
DB search
MDISKPVGSEITSVDFGVLSDGETQKLSAKQIVNPIVFDNLGHPVQGGLYDLSLGAFLRN
VCTTCGLDEKFCPGHMGHIELPVPVYNPMFFNMMYIYLRSSCLYCHRFKLSQLEVNFFMN
KLELVQYGLLLECEELEHIATSSRSKKNGGGGGGDDEEEDDEGDDDDGGVSGVDAKTRKE
LMERRQSFVKNAIADALKDGRTSARGVITASVGEERKEIIHHFYSRLLSRPKCSNCGMYS
PSFRKDGFVKIFENSLNDKQMVNNRVRGGKRLDMLKKNGEAKKGSSVSDIPHIKHKGGSK
YVLASEVRNVLKAVFENEQPVLQKVFHSRPYQHDYVSGDIFFKQAILVPPTRFRLPSKLG
DEIHENPQNELLSNILKTSVLIRDLNMQISQLYKDKISGEQKKVLFNRLMNSFVTLQNDV
NAFIDSTKNQNAPAGKQPNPGIKQALEKKEGLFRKHMMGKRVNYAARSVISPDPNIETNE
IGVPPVFAKKLTYPEPVTAHNVSELRQAVINGPDVWPGAVQIQNEDGRLVSLIGMSAEQR
KALANQLLTPSFGTGAAGGASSGSVVNKKVYRHLKNKDVVIMNRQPTLHKASMMGHKVRV
LPGEKTLRLHYANTGAYNADFDGDEMNMHFPQNENAKAEALNLANTDSQYLTPTSGSPLR
GLIQDHISAGVWLTSKDSFFDRNTYYQLIYGCIRPEDGHTSRSKIITVPPTIFKPEYLWT
GKQVITTILLNIKPENVPGVNLISKNKVKNDYWSKDSNENQVIFHNGELLSGILDKSQYG
ASQFGIVHSLHELYGPDVSGKALSVLGRLFTNFNTMYALTCGMDDLRLTEDGNAWRRDIL
KQSVDIGRVAAAEVTNLPEDTANDNKEFKRRLEEILRDDNKLGILDAITQSKVNTITSQV
VSKCVPDGTVKKFPYNAMQAMALSGAKGSNVNVSQIMCLLGQQALEGRRVPVMVSGKTLP
SFKSLETDARAGGYIKQRFYSGIRPQEYYFHCMAGREGLIDTAVKTSRSGYLQRCLTKQL
EGVHVNYDNSVRDGDGTMIQFLYGGDSIDTTKQSHMNQFEFCLENYDALLAKYNPGDMVE
NLDTDEALSYTKKVRKSLKKQKDVPHYDQVVKYDPVLNVYNPSKYLGAVSEKFQEKLESF
VSSNAHLFAHSKEEAKSTHKLTEKKFRALMQLKYMRSLVNPGEAVGIVASQSIGEPSTQM
TLNTFHFAGHGAANVTLGIPRMREIIMTASAMIKTPQMTLPLLNDVSDEMADAFCKSIGR
VVMSEFVDSVTVTENTSQDEDGSNTRSYVIHLGFYTKDEYEAEYDISQSQMEHVLTHSFI
HHLEAQIVKEVKKQKKPEHMPTVGKSAGKTDMESVSGKIKELSDDEDDNEEDDADEEHDK
NKGKQQVSYDGPDDDEVETMKRAEETSDEEMADADDDNDKDNSSSSSSESDDDDDDENDG
KDVDMEAPKELSRQAKDRQAEVIAQHNMVTAFDFDDDNGQWCEFKLELNGNETQKLLMVN
IVEDLLRRSVVREIPHIGRCLRPDPDAATGKRVLTTEGVNFKAMWSQDDFIDVNSITSND
VASVLATYGVEAARNTIVNEIYRVFDTYGISVSARHLELIADYMTREGTYLAFNRQGIDS
STSSFMKMSYETTCQFLTKAVLDGDREELESPSAKIVMGKLSNVGTGSFDVFAQLPKSS
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggatatttccaagccagtgggctcggaaatcacatcggtggactttggagtgctctcc
gatggagagacgcagaagctctcagcaaagcagattgtaaaccccatcgtgtttgacaac
ttgggtcatcctgtccaagggggactctacgacttgtcccttggtgcatttttgcgaaat
gtgtgtactacgtgtggcctagatgaaaaattctgtcctggccacatgggccacattgag
ttgcccgtgcctgtgtacaaccccatgtttttcaatatgatgtatatatacttgagaagt
tcgtgcttgtattgccaccgtttcaaattgagtcagctcgaagtcaacttctttatgaat
aagttggagttggttcagtatgggctcttgttggagtgtgaagagttggagcatattgct
actctgtcgagatccaagaaaaatggtggtggtggtggtggtgatgacgaagaagaagat
gatgaaggagatgatgacgatggcggcgtactgggtgttgacgccaagactagaaaggag
ttgatggagaggaggcaatcctttgtcaagaacgccattgccgatgccttgaaggatggc
agaacttctgcgcgtggggtcattactgcgtctgttggggaagaacggaaggaaatcata
caccatttctacagcagattgttgagcaggcccaagtgcagcaattgtgggatgtactcg
ccttcgttcagaaaggacgggtttgtcaagattttcgaaaactcgttgaatgacaaacag
atggtcaataacagagtgcgaggagggaaaagattggacatgttgaagaaaaacggcgag
gctaaaaaagggtcgagcgtgagtgatatccctcatatcaagcataagggtggctccaaa
tacgttttggcttcagaagtgagaaacgtcttgaaggccgttttcgaaaatgagcaaccg
gtgctacaaaaagtgtttcactcgagaccgtaccaacatgactatgtcagtggcgacatt
tttttcaagcaagcaattttggtgccgccaacgagattcaggttaccctcgaaattgggc
gacgagatccacgaaaaccctcaaaatgagcttttgtccaacattttgaaaacctcggtg
ttgattagagacttgaatatgcagatttcgcagttgtataaggacaaaatcagcggcgag
cagaaaaaagtgctattcaacagactcatgaactcgtttgttactttgcaaaacgacgtc
aatgcattcatcgactccacaaagaaccaaaatgccccagctggtaagcaaccgaaccca
ggtatcaagcaggcgttggagaagaaagaagggttgtttagaaaacacatgatgggtaaa
agagtcaattatgctgcgcgttcggtcatttcgcccgatccaaatatcgaaacaaatgag
attggggttccacccgtctttgccaaaaaattaacctatcctgaaccagtcacggcgcac
aatgtgtcggagttgagacaagcagtgatcaatgggcctgacgtgtggcccggtgcagtg
caaattcaaaacgaagatggaagattggtttcgttgattggaatgtctgcagaacagaga
aaagccttggctaaccaacttttgactccatcttttggaactggcgctgcaggaggagca
tcatcaggttcggttgtgaataaaaaagtttatcgacatctcaaaaacaaggatgttgtc
attatgaatcgtcaacctaccttgcacaaggcctcaatgatgggccataaagtgcgggtc
ctacccggtgagaaaactttgaggttgcactacgccaatactggtgcttacaatgccgat
ttcgatggtgatgaaatgaatatgcatttccctcaaaatgaaaatgccaaagctgaagct
ttgaatttggccaatactgatagccagtacctcacgcctacttcgggctcccctttgaga
ggtttaattcaagatcacatttccgcgggtgtttggttaaccagcaaggactcctttttc
gacagaaacacgtattaccagcttatttacggatgcattagacccgaagatggccatacc
tcgagaagcaaaatcatcaccgtgccaccgacaatcttcaaacccgagtatttgtggact
ggtaagcaggtcatcaccaccatcttgttgaacatcaagcctgaaaacgtccccggtgtc
aatttgatatcaaagaacaaagtcaaaaatgactactggagcaaagacagcaacgagaat
caagtcatcttccacaatggtgaactcttgagcggtattttggacaagtcgcaatatggt
gcctcgcaatttggaattgtgcattcattgcacgagctttacgggccagatgtatctggt
aaagcattgagtgtgctcgggagactctttacaaactttaataccatgtatgcattgact
tgtggtatggacgatttgagactaactgaggatggcaatgcatggagaagggacattttg
aagcaatctgttgacattggccgagttgcagctgccgaagtgacaaatttgcctgaggat
accgcgaatgacaataaggaattcaagagaagattagaagaaatcttgagagacgacaat
aaattgggcattcttgatgcaatcacgcaatcgaaagtcaataccatcacgtctcaagtc
gtttcgaaatgtgttcctgatggaacagtgaagaaatttccgtacaatgccatgcaagcc
atggccttgtctggtgccaagggttccaacgttaatgtttctcaaatcatgtgtctcttg
ggacaacaggcattggaaggtagaagagtgcccgtgatggtttcaggcaagactttgcca
tcgttcaagtcgctcgagactgacgcgagagccggtggctacatcaaacagcgattctac
tctggtatcaggccgcaagaatactacttccattgtatggccggtagagaagggttgatt
gataccgccgtcaagacctcgagatctggttacttgcaacgttgtttaaccaagcaattg
gaaggcgttcatgtcaactatgacaactcggtgagagatggcgatggcaccatgattcag
ttcctttacggtggtgactccatcgacaccactaaacaatcgcacatgaaccaatttgag
ttttgcttggagaattacgatgcgttattggctaagtataaccctggtgacatggttgaa
aacttggataccgacgaggccttatcgtacaccaaaaaggtacgcaagtcgttgaagaag
caaaaagacgtgccacattacgatcaagtggtgaaatacgatcctgttctcaacgtttac
aatccttcgaaataccttggtgccgtatcggagaagttccaggagaaattggaatcgttt
gtgctgagcaacgcacacttatttgctcactctaaggaagaagctaaatcgacgcataag
cttacggagaagaagtttagagcattgatgcaattgaagtatatgaggtctttggtgaac
cccggtgaagctgtcggtatcgttgcttctcaatctatcggtgagccatcgacgcaaatg
acgttaaacaccttccattttgcaggacacggtgcggcaaacgtcaccttgggtataccg
cgtatgagagaaatcatcatgacggcctcggccatgatcaagaccccgcagatgactttg
ccgcttttgaacgatgtcagcgatgaaatggctgatgcattctgtaaatcaatcggacga
gtggtgatgtcggaatttgtcgatagcgtcactgttactgaaaacacatctcaagatgaa
gacgggctgaatacccggtcctatgtgatacacttgggattctacaccaaggacgaatac
gaggctgaatatgatataagtcaaagtcaaatggagcacgtgttgacgcatagctttatc
catcatttggaagcgcagattgtcaaggaggttaaaaagcaaaagaagcctgagcatatg
cctaccgttggcaaatctgcaggtaaaaccgatatggaatctgttagtggtaaaatcaag
gaattgagcgatgacgaggatgacaatgaggaggacgatgcagatgaagaacacgataag
aataaaggtaaacagcaagtatcgtacgatggtcccgatgacgatgaagttgagactatg
aaacgtgcagaagagaccagtgatgaagagatggctgatgctgacgatgacaatgacaag
gacaactcatcgtcatcatcgctggaatcagatgacgatgacgatgatgaaaatgatgga
aaggacgtggatatggaggcaccgaaggagctctcgagacaggccaaagaccgtcaagct
gaagtgattgcacagcataatatggtgacggcgtttgatttcgatgatgacaatggccag
tggtgtgagttcaaacttgagctcaacggcaacgaaacgcaaaagctcttgatggtcaac
attgtggaggacttgttgcgtcgtagcgtcgtgcgtgagatcccccacattggaagatgc
ttgcgccccgatcccgacgccgctacgggcaagagggtcctcaccaccgaaggggtgaat
ttcaaggccatgtggagccaagacgactttatcgatgtcaacctgatcacttcgaatgac
gttgcctcagtgttggccacgtatggagttgaagcagccagaaacacgattgttaatgag
atttaccgagttttcgacacttatggtatcagtgtctctgctcgccatttggagttgatt
gctgactacatgactagagagggaacatacttggcttttaacagacaaggtatcgatagc
tcaacatcgagcttcatgaagatgtcgtatgagactacctgtcagtttttgactaaagca
gtgttggatggtgatcgtgaagagttggagagtccctcagccaagattgtcatgggtaag
ttgtctaatgtcggtactggatcatttgacgttttcgcccaattgcctaaaagtagttga
DBGET
integrated database retrieval system