KEGG   Lodderomyces beijingensis: 92205900
Entry
92205900          CDS       T10315                                 
Symbol
LODBEIA_P07040
Name
(RefSeq) uncharacterized protein
  KO
K12881  THO complex subunit 4
Organism
lbg  Lodderomyces beijingensis
Pathway
lbg03013  Nucleocytoplasmic transport
lbg03015  mRNA surveillance pathway
lbg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lbg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    92205900 (LODBEIA_P07040)
  09122 Translation
   03013 Nucleocytoplasmic transport
    92205900 (LODBEIA_P07040)
   03015 mRNA surveillance pathway
    92205900 (LODBEIA_P07040)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lbg03019]
    92205900 (LODBEIA_P07040)
   03041 Spliceosome [BR:lbg03041]
    92205900 (LODBEIA_P07040)
Messenger RNA biogenesis [BR:lbg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     92205900 (LODBEIA_P07040)
    TREX complex
     92205900 (LODBEIA_P07040)
Spliceosome [BR:lbg03041]
 Complex C
  Other components
   EJC/TREX
    92205900 (LODBEIA_P07040)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    92205900 (LODBEIA_P07040)
SSDB
Motif
Pfam: FoP_duplication RRM_1 RRM_3 R3H_PUS7L
Other DBs
NCBI-GeneID: 92205900
NCBI-ProteinID: XP_066827642
UniProt: A0ABP0ZJK6
LinkDB
Position
1:1731559..1732404
AA seq 281 aa
MSDNNNNNILERSLDDIIGEQKRERKFTPTRRRGASSSSHRHNSHHPYRRQPPPPHRLNP
DVYIPRTASGANARIPVDVLQMAQGRPTLRLKNIHPDLNGQDLNDLFSSINAVDFIKFDD
ADETVAYICFQNDCERSNSAAIDKYDGKKAMGKILIVENAHVVSLADRITVAQPRDREEF
ISVARGGQAPAPVRGGLRGKGRARFGGARSGNGRGGRGRGGSRTGPTRKTAEDLDKELND
YMGQSNDATSNGEGENGDHGDHGDNGHMEHTQPAQDEMSLD
NT seq 846 nt   +upstreamnt  +downstreamnt
atgtccgacaacaacaacaacaatattctagagagatcgctagatgacatcatcggtgag
cagaaaagagagcgcaaattcacgcccacgaggaggagaggagcatcttcgtccctgcat
cgtcacaacagccaccatccatatcgaagacaacctccaccgccacatcggttgaatcca
gatgtatacattccacgcacagcctccggggccaacgcaaggatccccgtcgatgtgcta
cagatggcgcaggggcgtcccacgttgcgcctcaagaacatccaccccgacttgaatggc
caggacttgaacgacttgttcagctccatcaacgcggtggatttcatcaagttcgacgat
gccgacgagactgttgcttatatatgtttccagaacgattgcgagcgcagcaacctggcg
gcgatagacaagtacgacggcaaaaaggccatgggcaagattttgattgttgaaaatgcc
catgttgtgagtctagctgatcgaatcaccgtggctcaaccaagagacagggaagagttc
atcagcgttgcgcgaggtggccaggcaccagcaccagttagaggcgggttgagagggaaa
ggaagagccagatttggcggggcaaggagcggtaatggtagaggtggcagaggcagaggc
gggtctcgaactggtccaactaggaaaacagctgaggacttggacaaggaattgaatgac
tatatgggtcagtctaacgatgctacatccaacggagaaggagaaaatggagatcacgga
gatcatggagataatggacacatggaacacacgcagcccgctcaggatgaaatgagtttg
gactag

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