Lodderomyces beijingensis: 92205900
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Entry
92205900 CDS
T10315
Symbol
LODBEIA_P07040
Name
(RefSeq) uncharacterized protein
KO
K12881
THO complex subunit 4
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03013
Nucleocytoplasmic transport
lbg03015
mRNA surveillance pathway
lbg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92205900 (LODBEIA_P07040)
09122 Translation
03013 Nucleocytoplasmic transport
92205900 (LODBEIA_P07040)
03015 mRNA surveillance pathway
92205900 (LODBEIA_P07040)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbg03019
]
92205900 (LODBEIA_P07040)
03041 Spliceosome [BR:
lbg03041
]
92205900 (LODBEIA_P07040)
Messenger RNA biogenesis [BR:
lbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
92205900 (LODBEIA_P07040)
TREX complex
92205900 (LODBEIA_P07040)
Spliceosome [BR:
lbg03041
]
Complex C
Other components
EJC/TREX
92205900 (LODBEIA_P07040)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
92205900 (LODBEIA_P07040)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FoP_duplication
RRM_1
RRM_3
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
92205900
NCBI-ProteinID:
XP_066827642
UniProt:
A0ABP0ZJK6
LinkDB
All DBs
Position
1:1731559..1732404
Genome browser
AA seq
281 aa
AA seq
DB search
MSDNNNNNILERSLDDIIGEQKRERKFTPTRRRGASSSSHRHNSHHPYRRQPPPPHRLNP
DVYIPRTASGANARIPVDVLQMAQGRPTLRLKNIHPDLNGQDLNDLFSSINAVDFIKFDD
ADETVAYICFQNDCERSNSAAIDKYDGKKAMGKILIVENAHVVSLADRITVAQPRDREEF
ISVARGGQAPAPVRGGLRGKGRARFGGARSGNGRGGRGRGGSRTGPTRKTAEDLDKELND
YMGQSNDATSNGEGENGDHGDHGDNGHMEHTQPAQDEMSLD
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacaacaacaacaacaatattctagagagatcgctagatgacatcatcggtgag
cagaaaagagagcgcaaattcacgcccacgaggaggagaggagcatcttcgtccctgcat
cgtcacaacagccaccatccatatcgaagacaacctccaccgccacatcggttgaatcca
gatgtatacattccacgcacagcctccggggccaacgcaaggatccccgtcgatgtgcta
cagatggcgcaggggcgtcccacgttgcgcctcaagaacatccaccccgacttgaatggc
caggacttgaacgacttgttcagctccatcaacgcggtggatttcatcaagttcgacgat
gccgacgagactgttgcttatatatgtttccagaacgattgcgagcgcagcaacctggcg
gcgatagacaagtacgacggcaaaaaggccatgggcaagattttgattgttgaaaatgcc
catgttgtgagtctagctgatcgaatcaccgtggctcaaccaagagacagggaagagttc
atcagcgttgcgcgaggtggccaggcaccagcaccagttagaggcgggttgagagggaaa
ggaagagccagatttggcggggcaaggagcggtaatggtagaggtggcagaggcagaggc
gggtctcgaactggtccaactaggaaaacagctgaggacttggacaaggaattgaatgac
tatatgggtcagtctaacgatgctacatccaacggagaaggagaaaatggagatcacgga
gatcatggagataatggacacatggaacacacgcagcccgctcaggatgaaatgagtttg
gactag
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