Lodderomyces beijingensis: 92205904
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Entry
92205904 CDS
T10315
Symbol
LODBEIA_P07080
Name
(RefSeq) uncharacterized protein
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
92205904 (LODBEIA_P07080)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbg03019
]
92205904 (LODBEIA_P07080)
Enzymes [BR:
lbg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
92205904 (LODBEIA_P07080)
Messenger RNA biogenesis [BR:
lbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
92205904 (LODBEIA_P07080)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
92205904 (LODBEIA_P07080)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
92205904
NCBI-ProteinID:
XP_066827646
LinkDB
All DBs
Position
1:1742247..1744661
Genome browser
AA seq
804 aa
AA seq
DB search
MQGQPKSNLQAQQILLQQLHSGQQQSHLQSQQPQQPQNAGNGLAAGFQPNDAFNDNLGQN
VFQNSFSRNSNSLQQQQQQQQQQQQQQQQQQQFLPQFQQNQSAQSGGNPQVIGGGISQSQ
QPYQPNPQLQRHVAGLQQPFFNQPQSVLSNQQKQQQQQQQQQQQQQQQQQQQQHLQMQAG
QLQTPAPKHNKLNVDNPNSDHWQNQEQLYQLSRSNKVPHSYARQYASNSRKLKNPYTDPK
SIGLVEATKAIVANAEEEEQKRSSSSSSDTPTTNSALLHNKKISQDLDDDSMEEQRMRLK
TQGRQLWCQLDLSGQGLVHLSPKLFHYDFLESLYLNNNKLTTVPRAISKLRSLRILDLSN
NRISELPSELGLCFNLRFLYLFDNNIKSLPSSFGNLIELLTLGIEGNPMDLSTANLLAER
GTKDLIATIRDSQTTRKPPAPRPWLQVEDDGEVVDSQEAYTQESNNQANTFTILSYNTLC
QHYATPKMYKFTPSWALQWDYRRAALEKEILHYSTDIICMQEMETKTYMDFWYHLLTQNG
YKGLFFNKTRSKTMSEKDSLKVDGCATFYKVDKFTLVHKQNFEYNSVCMGSDKYKKTKDL
FNRFMNKDNIALISYLQHKETGEKICFVNTHLHWDPAFNDVKTLQIGILLEELQHIIKKY
QHASSLDEVKNSSLVICGDFNSVKESAVYQLFSTGASKNHDDMAGRDYGKHTESGFHHPF
KLKSAYETLGELPFTNLTPAFTDNIDYIWYSTSTLQVKGLLGKVDQEYADECIGFPDAHF
PSDHVPILAKFQIKKSLAGGGGSN
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgcagggacagcccaaatcgaatttgcaagcgcagcaaatactcttgcagcagcttcat
ctgggacagcagcagtcacatcttcagctgcaacaacctcagcaaccgcaaaatgcaggg
aacggactagctgccggctttcaaccaaacgacgcctttaacgacaatcttggtcagaac
gtgtttcaaaatagctttctgcggaacctgaactccttgcaacaacaacaacagcaacag
cagcagcaacagcaacaacaacaacaacagcagcagttccttccacaatttcaacaaaat
caatctgctcaaagtggcggaaacccacaagtaattggcggcggtattctgcaatcgcag
cagccgtaccaaccgaacccccaattgcagagacacgtcgcaggccttcagcaaccattc
ttcaatcaaccacaatcggtacttctgaatcaacaaaaacaacagcagcagcaacaacaa
caacaacaacaacaacaacaacagcagcagcagcagcaacaccttcaaatgcaagcaggg
cagttacaaacgccggcgcccaagcacaacaaattgaatgtagataatccaaacagcgac
cactggcaaaaccaagaacaattataccaactatctaggtcaaataaagtcccgcactcg
tatgcaagacagtacgcttcaaattcgagaaaattgaaaaacccatatacagacccaaag
tcgataggtttagtagaggcgaccaaggccatcgtggctaatgcagaagaagaggagcag
aagaggagcagcctgtctagtagtgacacgccaactacaaactcggcgttgctccacaac
aagaaaatctcgcaagaccttgatgacgactcgatggaagagcagcggatgagattgaaa
acacagggcagacagttgtggtgccagttggacttgagtggacaagggttggtgcaccta
tcgccaaagctatttcattacgactttctagaatcattatatttaaacaacaacaaattg
accactgttccgcgggcgatcagcaagttgaggagtttgagaatacttgatctatccaac
aatagaatcagcgagcttccttctgagcttggcttgtgtttcaatttgcgattcttgtac
ttgtttgacaacaacatcaagtctttgcccagctcctttggcaacttgattgagcttttg
acgttgggaatagagggaaacccaatggacttgagtacagcaaacttgctagcggaaagg
ggaaccaaagaccttatagccacaatcagagacctgcaaacaacgaggaaaccgccggca
ccgagaccatggttgcaagtggaggatgatggagaagtggttgattctcaagaagcgtac
actcaggagagcaacaatcaagccaacacattcacaatactttcgtacaacaccttgtgt
cagcattatgcaacgccaaaaatgtacaaatttactccctcgtgggctttgcagtgggac
tatcggagagctgcattggaaaaggaaattttgcattattccaccgatatcatctgtatg
caagaaatggaaaccaagacctacatggatttttggtaccacttgttgacgcagaatggt
tacaaagggttgtttttcaacaagacgagatcaaaaacgatgagcgagaaggactcgttg
aaagttgatggatgtgccactttttacaaagtcgacaagtttaccttggtgcataaacaa
aactttgaatacaatagtgtgtgcatggggtccgacaagtacaagaagaccaaggacttg
ttcaatcggtttatgaacaaggacaacattgcgttgatatcgtatttgcagcataaggaa
acgggcgaaaagatttgctttgtcaatacgcatttgcactgggacccggcgtttaacgat
gtcaagacgttgcaaattgggatacttttagaagagctccagcatataatcaagaaatac
cagcatgcgtcgtcattggatgaagtgaaaaactcgtcgcttgttatttgcggggatttc
aactccgtgaaagagtcagccgtgtaccagcttttctcaactggggcctcaaagaaccac
gacgatatggctggccgtgactatggtaagcacacggaatccggtttccatcatccattc
aagctaaagtcggcctatgaaactcttggcgagttgccatttacgaatttgacccctgca
ttcactgataacattgactatatatggtatctgacctcgacgttgcaagtgaaggggttg
ttgggtaaagttgatcaagaatacgccgatgagtgtattgggttccccgatgctcatttc
ccgagtgatcatgttccaatcttggccaagttccaaatcaagaaatcacttgctggtggt
ggtggtagcaattga
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integrated database retrieval system
