Lodderomyces beijingensis: 92205910
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Entry
92205910 CDS
T10315
Symbol
LODBEIA_P07140
Name
(RefSeq) uncharacterized protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
92205910 (LODBEIA_P07140)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbg03019
]
92205910 (LODBEIA_P07140)
Messenger RNA biogenesis [BR:
lbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
92205910 (LODBEIA_P07140)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
92205910 (LODBEIA_P07140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
92205910
NCBI-ProteinID:
XP_066827652
LinkDB
All DBs
Position
1:1757303..1759441
Genome browser
AA seq
712 aa
AA seq
DB search
MSARKLQHEYERLNKKISEGLAAFEEIKDKIHQTQIASQKEKFENDLKKELKKLQRCRDQ
LKLWLADSSVKLDKNNLQENRTKIEQAMDDFKELERNSKIKQFSNEGLEMQQKKAQLSSK
FGDPEKVQEACDYISGIIQQLNDQNDELDREMESLSQQSKKKGSHSVSSSIEEVKYKIDR
NNTHIERLESVVEDLESDKLDPAKIDNIKDDLDYYVEMNQDEDYVEYDEFYDQLEVADDE
DEDVEIEGSLAQMAAESFEEEERKRLELQQLGQQQSEQTRATQTASSSSASATNSALTQQ
APHHKPFAISNESHVQPLSSMANNNNTIGNVNTTTTTTTNNNNANNNTNNSTASSSTAQA
PTRKAKGMNVAPAPAPPPIISGNSYSNVIKAAQAASSSSNNNNNINNNITSTSNNANNNV
IPTAASSGVANTGDSKRGTPLVNNNVPLATALATASTAVSTPAKLPPPGLSHVSNAASKS
QSVSPITSQAKVYDEEPLNKMISNVSQSSVQTNIESSAMFGVALSKLGNIASSRLNDPLP
IQSISSMLEQSLLNCPDSFDAEKPRQYIPQNVHPSMIDYPQEPMFELNSLHFMQKFDDDL
LFYCFYYGEDDGMNNFAKWNAAKELNKRGWMFNTELSQWVSRAKIFSSIKSRSTSIVPNL
GAEAQEYNNGSVNSTNNITNTNGPEESENGEVFNQYFDEKTWLIRNSFSKKV
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgcggaagttgcaacatgagtatgagaggctaaacaaaaaaatcagtgaaggt
ttggcagcctttgaagagattaaggacaagattcatcagacccagatagcgtcccagaag
gaaaagtttgaaaacgacttgaagaaggaattgaagaaattgcagagatgtagagaccaa
ttaaagttgtggttggccgatagcagcgtcaagctagataagaataacctccaagagaac
cggaccaagatcgaacaggcgatggacgatttcaaagagctagaacgaaattcaaagatc
aagcagttttcgaacgaagggttggagatgcagcagaagaaagcgcagcttctgtccaag
tttggagatcccgaaaaagttcaagaagcgtgtgattatatatctggcatcattcagcag
ttgaacgaccagaacgacgaattggaccgagaaatggaatctctatcgcagcagctgaaa
aaaaagggcagccattcggtgctgtcctcgatagaagaagtcaagtacaagattgatcga
aataacacccacattgagcggttagagtcggtggtggaggatttagagagtgataaattg
gatccagcgaaaatcgacaacatcaaggatgatcttgactattacgttgaaatgaaccaa
gacgaagattacgtggagtacgatgagttttacgaccaattggaagtggcagatgacgaa
gacgaagatgttgagattgaaggaagtttggcacaaatggcagcagaatcttttgaagaa
gaagagagaaagaggttggaattgcagcagttgggccagcagcagagcgagcagacaaga
gctacacaaacggcatcttcttcatctgcctcggctacaaactctgcgctcactcagcag
gcaccgcaccacaagccttttgcaatttcaaatgagtctcatgttcaacccctttcaagc
atggcaaataataacaacaccattggtaatgtcaacaccactaccaccaccaccaccaac
aacaacaacgccaacaacaacaccaacaacagcaccgccagcagcagcaccgcacaggca
ccgactaggaaagcaaaaggaatgaatgttgcacctgcgcctgcaccaccaccaatcata
agcggcaactcgtactcaaatgttatcaaggctgctcaggctgccagctcgtcgagcaac
aacaacaacaatatcaacaacaacatcacaagcaccagcaacaatgccaacaacaacgtc
attccgacggcggcaagttcaggcgttgcaaataccggcgacagcaaaagaggaacaccc
cttgttaataataatgtaccattagcaaccgcattagcgacagcatcgacagcagtgtca
acaccagctaaattgccacctccaggcttgagccatgtatcgaatgccgcttcaaagtct
cagtctgtttctccaataacaagccaggctaaagtctacgacgaagagcctttgaacaag
atgatttcgaacgtgtcacaactgtcggttcaaacaaatattgagtcctcggcaatgttt
ggagttgcattgctgaaattgggcaatatagcgagtagcaggttgaacgatccacttcct
atacaatctataagcagcatgctcgaacagtcactactcaactgtcccgattcgtttgat
gctgagaaaccaagacaatacattcctcaaaatgtccacccttctatgattgattaccca
caggagccaatgtttgaattgaacagtttgcattttatgcaaaagttcgacgatgattta
ttattctattgcttctactacggagaagacgacggaatgaataatttcgccaaatggaat
gcagccaaggagttgaacaagagaggatggatgttcaacaccgaacttagtcaatgggtc
ctgagggctaaaattttcagttccatcaagagcagatcaacgtcgattgtcccaaacttg
ggagctgaggcacaagaatataacaacggctcggtcaactcaaccaacaatatcaccaat
acaaacggtcccgaggaatcagaaaacggtgaagttttcaaccagtattttgacgaaaaa
acgtggcttattagaaattcattcctgaagaaagtatga
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