Lodderomyces beijingensis: 92206073
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Entry
92206073 CDS
T10315
Symbol
LODBEIA_P08770
Name
(RefSeq) uncharacterized protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92206073 (LODBEIA_P08770)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbg03041
]
92206073 (LODBEIA_P08770)
03009 Ribosome biogenesis [BR:
lbg03009
]
92206073 (LODBEIA_P08770)
Enzymes [BR:
lbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
92206073 (LODBEIA_P08770)
Spliceosome [BR:
lbg03041
]
Complex A
U1 snRNP components
U1 related factors
92206073 (LODBEIA_P08770)
Complex B
92206073 (LODBEIA_P08770)
Ribosome biogenesis [BR:
lbg03009
]
Eukaryotic type
Pre-60S particles
Helicases
92206073 (LODBEIA_P08770)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
92206073
NCBI-ProteinID:
XP_066827815
LinkDB
All DBs
Position
1:join(2137005..2138298,2139094..2139443)
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AA seq
547 aa
AA seq
DB search
MEMSYGGGYGNQGGYGGGGQGGGYGGGGYGGGRGGGYGGSGGGYGGRGGGYGGGGRRDKF
DNMRSELVAPQWDLETLPKFEKNFYIEHPNVAARSDAEIDAFRRENEMSINGHDIPHPIT
SFDEAGFPDYVLNEVKNQGFPKPTGIQCQGWPMALSGRDMVGIASTGSGKTLSYCLPGIV
HINAQPLLQRGDGPIVLVLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQVRDL
ANGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQ
TLMWSATWPKEVQALARDYLVDPIQVTIGSLELAASHTITQIVQVVTDFQKRDLLVKQLE
GALNDQNSKVLVFASTKRTCDEVTSYLRSDGWPALAIHGDKEQHERDWVLKEFRTGGHSI
MVATDVAARGIDVKGITHVVNFDMPGNIEDYVHRIGRTGRGGATGTAISFFTEKDKKLGG
DLCKIMREAKQTVPPELLQYDRRGFGGHIRYGAGRGGRGGRGGRGGYGRRGGYSSGSNTA
PLGNRRF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgtcttacggcggaggatacggtaatcaaggaggatacggtggcggtggccaa
ggaggtggctacggcggtggtggatatggtggtggaagaggtggtggctacggcggtagt
ggtggaggatacggagggagaggtggaggctacggtggtggcggaagaagagacaaattt
gacaacatgagactggaactagttgcacctcaatgggatttagaaactttgccaaagttt
gaaaaaaatttctatatcgagcatcccaacgtggctgcaaggtctgatgccgaaattgac
gccttcagaagggaaaatgaaatgagtataaatggccatgacatcccccatcccatcacc
tcctttgatgaggctgggttccccgattacgtcttgaacgaagtgaaaaatcaaggtttc
ccaaagccaacaggtattcaatgtcagggttggccaatggctttgagtggtagggatatg
gttggtatcgcctccactggttccggcaaaaccttgtcctactgtttaccaggtattgtc
cacatcaatgcccagcctttgttgcaaagaggcgatggtcccattgtcttggtgttggcc
ccaacaagagaattggctgttcaaattcaaactgaatgtagcaagtttggtaagtcatcc
agaatcagaaacacgtgtgtttacggtggtgccccaaaaggccctcaagttcgagacttg
gccaacggtgttgaaatctgtattgctaccccaggcagattaattgatatgttggaggct
ggcaagaccaatttaaagagagtcacttatttggttttggatgaggccgacagaatgttg
gatatggggtttgagcctcaaattagaaaaattgtcgatcaaatcagaccagatcgtcag
actttgatgtggtctgcaacttggccaaaagaagtgcaagctttagctagagattacttg
gttgatcctattcaagttacaattggttcattagagttggctgcttctcacaccatcacc
caaattgttcaagttgtcactgatttccaaaagagagacttgttggttaaacagttggaa
ggtgccttgaatgatcaaaattccaaagttttggtttttgcctcaacaaagagaacttgt
gatgaagtcaccagttatttgaggtcagatggctggccagcattagccattcacggtgac
aaagagcagcacgaaagagattgggtattgaaggaatttagaaccggaggacattcaatc
atggttgcaaccgatgttgcagcaagaggtattgatgtcaaaggtataacacatgtggtt
aatttcgatatgccaggaaacattgaagactacgttcatcgtattggtagaacaggtaga
ggtggtgcaacgggtactgccatttcgtttttcactgaaaaggacaagaaactaggcggc
gacttgtgcaagattatgagagaggccaaacagactgttccacctgaattactacaatat
gatagaagagggttcgggggacatatcagatatggtgctggtagaggcggccgcggtggc
agaggaggtagaggcgggtatggcagaagaggcggttattccagtggaagcaacactgca
ccattgggcaaccgccgcttctga
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