Lodderomyces beijingensis: 92206225
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Entry
92206225 CDS
T10315
Symbol
LODBEIA_P10290
Name
(RefSeq) uncharacterized protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
lbg Lodderomyces beijingensis
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lbg01009
]
92206225 (LODBEIA_P10290)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbg03019
]
92206225 (LODBEIA_P10290)
04131 Membrane trafficking [BR:
lbg04131
]
92206225 (LODBEIA_P10290)
03036 Chromosome and associated proteins [BR:
lbg03036
]
92206225 (LODBEIA_P10290)
Enzymes [BR:
lbg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
92206225 (LODBEIA_P10290)
Protein phosphatases and associated proteins [BR:
lbg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
92206225 (LODBEIA_P10290)
Messenger RNA biogenesis [BR:
lbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
92206225 (LODBEIA_P10290)
Membrane trafficking [BR:
lbg04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
92206225 (LODBEIA_P10290)
Chromosome and associated proteins [BR:
lbg03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
92206225 (LODBEIA_P10290)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2-like
IMUP
CENP-R
Motif
Other DBs
NCBI-GeneID:
92206225
NCBI-ProteinID:
XP_066827967
LinkDB
All DBs
Position
1:complement(2506832..2509420)
Genome browser
AA seq
862 aa
AA seq
DB search
MSQPESEKKLDEAAVAELQQDSRVQEEVKTNCQATHEESQRRGAGVLVKEEERQVDGGVD
DAEIEVEKDISPDKLTREPDGPATACQPPTKKIKLEEETPKLKEKPAEEEQNNGSTAHGA
TRPKVISQARPIVVQPTKPQLSYVPLKTGLVYDVRMRYHAKIFTSYFEYTDPHPEDPRRI
YRIYKRLVEAGLVLDYSLSGIDELGPYIQKLPIREASTEEILEVHSEQHLEHIKSTEAMS
KDELLRETSVGDSIYFNNDSYLAAKLSCGGTIEACKAVVEGKVKNSLAAVRPPGHHAEPN
SPGGFCLFSNVAVAAKNILKSYPESVRRIVIVDWDIHHGNGTQKAFYNDPRVLYISVHRY
ENGKFYPGTKHANAEQVGEGPGRGYNVNIPWLNAGMHDGDYVYAFNRVVIPVILEFDPDL
IIVSSGFDAADGDVIGGCHVSPAGYGYMTHMLKGIAKGKLAVILEGGYNLDSISESALAV
AKVLIGEPPENTISKQPQPDAIEIIDEVIKIQSKYWKCLSHGVTKTTFDEIYDLPDLDKN
RYKLTNIADPIRAFQNNEAFTKREFINIPIMNHGKGDHKNSSFSCDLPDQYEDLIIASPD
IYECSTIIITVHDPPDLWGCINPVNGVIESNSSIVLEQPLFQIMDKVAKEKDADNNDRVG
YIDVNIPSYQLPIPGLSTSEESTYNPTIFAQEILLYIWDNYIAYFHQLKKIIFVGFGEAY
QSIVHLFSKRPSSEIKRLVKFTVAYVNRTQLKPLVPVMDESMVDWFYSNSTIFTSCYNPC
WNTSSSSSSSSSSSSSSNGSHHHNGTSNGDANGSDELRKPRRKFGRVLKAGVDGLFDVIN
DKFDEGVDNILDSIEDYSSSDE
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagccagaactggaaaaaaagttagacgaagctgctgtcgcagaattgcagcaa
gattcccgcgtgcaggaagaggtcaagacaaattgccaggcaactcacgaggaaagccag
aggcggggtgcaggggttttggtcaaggaagaggagcgtcaggttgatggtggggttgat
gacgctgagatcgaggtggagaaggatatcctgcctgataagttgactcgagagccagac
ggtcccgcgaccgcgtgccagcctcctacaaaaaagattaagcttgaagaggagacaccc
aagttgaaggaaaagccggcggaggaggagcaaaacaatggctctactgcgcatggtgct
acgaggcccaaagtcatcctgcaagcacgtcccatagtggtccagccaacgaaaccccag
ctatcgtacgtgcccttaaagacgggcttggtctacgatgtccgcatgcgataccacgct
aaaatcttcacctcgtatttcgaatacacagacccccacccggaagatcctcgtcgtatc
taccggatttacaaaagattggtggaagctggcttggtgttggactattcactttctggc
atcgacgagttggggccatatatccaaaaattacccattcgagaagcgtccactgaagag
attctcgaagtgcactcagagcagcacttggaacacataaagtcgaccgaagcaatgtcc
aaggatgaactactccgagaaacctctgttggtgattccatctacttcaacaacgactct
tacttggcagccaagttgtcgtgtggtggcaccatcgaagcctgtaaagcagtggttgag
ggcaaagtgaaaaactcactcgcggccgtgagacccccaggccatcacgccgagccaaat
tcccccggtggcttttgcttattcagtaacgtggctgtagccgccaaaaatatcttaaaa
tcttatcccgaatcagtgaggaggattgtcattgttgactgggacattcaccatggcaat
ggtacccaaaaggcattttacaatgaccctcgagtgctctacatttcggttcatcgttat
gaaaatgggaaattctacccgggtacaaagcatgcaaacgccgagcaggtgggcgaaggt
ccaggtagagggtacaacgtcaatataccgtggctaaacgccggcatgcacgacggagac
tatgtttacgcgttcaaccgggtggtgataccggtaatcttggaatttgaccccgacctc
atcatcgtcagctcggggtttgatgccgccgacggtgatgttatcggtggctgtcatgtt
agtcccgctggatatggctacatgacacatatgctcaaagggatcgcaaagggcaaactt
gctgtgattctagaaggtggatacaatctcgactccatcagtgaaagtgctttggctgta
gcaaaagtcctcattggagaaccaccagagaataccatttcaaagcaaccacagccggac
gcaattgaaatcattgacgaagtcatcaagatccaatcgaaatactggaaatgcctcagc
cacggcgtcaccaagacgacatttgacgagatatacgatctcccggatctagataagaac
agatacaaactcacaaacatagcggacccgatccgtgccttccagaataacgaagccttc
accaaaagggagtttatcaacataccaatcatgaaccacggcaagggagaccacaaaaac
tccagtttctcgtgtgatttacccgaccagtacgaggacttgatcattgcaagccccgac
atctacgaatgctcaaccataatcatcacggtgcatgaccctcccgatttatgggggtgc
atcaaccccgtcaatggcgtgattgaaagcaattccagcatagtgctagaacagccactt
ttccaaatcatggataaagtagccaaggagaaagacgcagacaacaatgaccgagtcggt
tacattgatgtaaatataccgtcttaccaactccccatcccgggcctttccacctccgag
gaatcaacatacaaccccacgatttttgcccaggaaattctcttgtacatttgggacaac
tacatcgcctacttccaccagctcaaaaagatcatctttgtcggctttggagaagcgtac
cagagtatagtgcatctattcagcaagcgtccttcttccgagatcaagcggttggtcaaa
ttcacagtggcgtacgtgaaccgcacccaattgaaaccgttggtccccgtaatggatgaa
agcatggttgactggttctacctgaactcgaccatcttcaccagctgctacaatccgtgc
tggaacacctcatcatcttcatcttcatcttcatcgtcttcttcgtcttcaaatggatct
catcatcacaatggcacgtcgaatggcgacgcaaacggttcggatgagttgaggaaaccg
agaaggaagtttggccgcgtgttgaaagcgggcgtcgatggccttttcgatgtcatcaat
gacaagttcgatgaaggcgtggataatatcttggatagcatcgaggactactccagctct
gacgagtag
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