KEGG   Lodderomyces beijingensis: 92206454
Entry
92206454          CDS       T10315                                 
Symbol
LODBEIA_P12580
Name
(RefSeq) uncharacterized protein
  KO
K10752  histone-binding protein RBBP4
Organism
lbg  Lodderomyces beijingensis
Pathway
lbg03082  ATP-dependent chromatin remodeling
lbg03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:lbg00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    92206454 (LODBEIA_P12580)
   03083 Polycomb repressive complex
    92206454 (LODBEIA_P12580)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lbg03036]
    92206454 (LODBEIA_P12580)
Chromosome and associated proteins [BR:lbg03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     92206454 (LODBEIA_P12580)
  Histone modification proteins
   HAT complexes
    HATB complex
     92206454 (LODBEIA_P12580)
   HDAC complexes
    Sin3A-HDAC complex
     92206454 (LODBEIA_P12580)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     92206454 (LODBEIA_P12580)
    PRC2.2
     92206454 (LODBEIA_P12580)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     92206454 (LODBEIA_P12580)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    92206454 (LODBEIA_P12580)
  Chromatin remodeling factors
   NuRD complex
    92206454 (LODBEIA_P12580)
   NuRF complex
    92206454 (LODBEIA_P12580)
   NuRF complex (fruit fly)
    92206454 (LODBEIA_P12580)
SSDB
Motif
Pfam: CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_EIPR1 Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd EIF3I WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st ANAPC4_WD40 MIOS_WD40 Beta-prop_EML Beta-prop_RIG_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_SPT8 WD_LRWD1 WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP NBCH_WD40
Other DBs
NCBI-GeneID: 92206454
NCBI-ProteinID: XP_066828196
LinkDB
Position
2:205497..206684
AA seq 395 aa
MAEEGSKEDETRELSVKEEYQLWRKNCRYMYEFVSETAMTWPSLTIQWLPNHSVEDGLIN
TRLLLGTHTSGNDTNYLKVADTQISQDGSKKAYSRIKIAKKFENNQEICRARYMPQDPNL
VGTINGSGEVDLYKLDSDTNGSISSFQPHSENGYGLAWSPMEKGLLLTAADDKFVCVSDT
NSSGNALIFKSSEQADIVNDAKWHFFDQNLFASVSEDDYTLLYDLRTKEVVSKYLANNAK
GVNSLAFSPFSHNLLAIGASNSNISLLDLRKLNSKGTGGSVHTMMGHTEGITCMEFSPHK
DGILASGSQDRRVILWDLFKIGEEQQQDDAEDGCPELFMMHAGHTAGVTDLSWCPFKPWT
IGSVADDNIVHLWQISKTIINDDEWEDEIDETMLE
NT seq 1188 nt   +upstreamnt  +downstreamnt
atggcagaagaaggatccaaggaggacgaaacaagagagttgtccgtgaaagaagagtat
cagctatggagaaagaactgcaggtacatgtacgagtttgtcagcgagacggcgatgaca
tggccgtcgctaaccatccagtggcttccgaaccacagtgtggaagacgggttgatcaac
accaggctcttgcttgggacccacacctcgggaaacgataccaattaccttaaagtcgca
gatacgcaaatctcgcaggacgggtccaagaaggcctattctagaataaaaatcgccaaa
aagtttgaaaacaaccaggagatatgtcgagctagatacatgccccaggaccccaatttg
gttggaacaatcaacgggtctggagaggtggacttgtataagctagatagcgatacgaac
ggcagcatctcgagtttccagccacattcggaaaacgggtatgggctagcatggagtccc
atggaaaaggggctcttgctcacggcagccgatgacaaatttgtttgcgttagtgatacc
aacagctcgggcaatgcgctcatatttaagagctcggagcaggcagatatcgtgaacgat
gcaaagtggcatttctttgaccagaacctttttgcatcggtttctgaggacgactacacc
ttgctatatgatttgagaaccaaggaggtggtctccaaatatttggccaacaatgcaaag
ggggtcaactccctagctttttcgcccttttcgcacaacttgttggctattggtgcttca
aactccaacattagtttacttgacttgcgaaagttgaacagcaagggaactggcgggtcg
gtgcatacaatgatgggccacacagagggcatcacatgcatggaattctcgccacacaaa
gatggtatattagcctccggtagtcaagatagacgggtgatcttgtgggatttattcaaa
ataggcgaagagcaacaacaagacgatgcagaagatgggtgtcccgagttgtttatgatg
cacgctggccacacagcaggtgtcacagacttgtcgtggtgtcctttcaaaccgtggaca
attggatctgttgctgatgacaacattgtgcatctctggcaaatcagtaaaacaataatt
aacgatgacgaatgggaagacgaaatcgatgaaactatgcttgaatag

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