Lodderomyces beijingensis: 92206454
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Entry
92206454 CDS
T10315
Symbol
LODBEIA_P12580
Name
(RefSeq) uncharacterized protein
KO
K10752
histone-binding protein RBBP4
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03082
ATP-dependent chromatin remodeling
lbg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
92206454 (LODBEIA_P12580)
03083 Polycomb repressive complex
92206454 (LODBEIA_P12580)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lbg03036
]
92206454 (LODBEIA_P12580)
Chromosome and associated proteins [BR:
lbg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
92206454 (LODBEIA_P12580)
Histone modification proteins
HAT complexes
HATB complex
92206454 (LODBEIA_P12580)
HDAC complexes
Sin3A-HDAC complex
92206454 (LODBEIA_P12580)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
92206454 (LODBEIA_P12580)
PRC2.2
92206454 (LODBEIA_P12580)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
92206454 (LODBEIA_P12580)
Heterochromatin formation proteins
Other heterochromatin formation proteins
92206454 (LODBEIA_P12580)
Chromatin remodeling factors
NuRD complex
92206454 (LODBEIA_P12580)
NuRF complex
92206454 (LODBEIA_P12580)
NuRF complex (fruit fly)
92206454 (LODBEIA_P12580)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
MIOS_WD40
Beta-prop_EML
Beta-prop_RIG_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
WD_LRWD1
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
92206454
NCBI-ProteinID:
XP_066828196
LinkDB
All DBs
Position
2:205497..206684
Genome browser
AA seq
395 aa
AA seq
DB search
MAEEGSKEDETRELSVKEEYQLWRKNCRYMYEFVSETAMTWPSLTIQWLPNHSVEDGLIN
TRLLLGTHTSGNDTNYLKVADTQISQDGSKKAYSRIKIAKKFENNQEICRARYMPQDPNL
VGTINGSGEVDLYKLDSDTNGSISSFQPHSENGYGLAWSPMEKGLLLTAADDKFVCVSDT
NSSGNALIFKSSEQADIVNDAKWHFFDQNLFASVSEDDYTLLYDLRTKEVVSKYLANNAK
GVNSLAFSPFSHNLLAIGASNSNISLLDLRKLNSKGTGGSVHTMMGHTEGITCMEFSPHK
DGILASGSQDRRVILWDLFKIGEEQQQDDAEDGCPELFMMHAGHTAGVTDLSWCPFKPWT
IGSVADDNIVHLWQISKTIINDDEWEDEIDETMLE
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaaggatccaaggaggacgaaacaagagagttgtccgtgaaagaagagtat
cagctatggagaaagaactgcaggtacatgtacgagtttgtcagcgagacggcgatgaca
tggccgtcgctaaccatccagtggcttccgaaccacagtgtggaagacgggttgatcaac
accaggctcttgcttgggacccacacctcgggaaacgataccaattaccttaaagtcgca
gatacgcaaatctcgcaggacgggtccaagaaggcctattctagaataaaaatcgccaaa
aagtttgaaaacaaccaggagatatgtcgagctagatacatgccccaggaccccaatttg
gttggaacaatcaacgggtctggagaggtggacttgtataagctagatagcgatacgaac
ggcagcatctcgagtttccagccacattcggaaaacgggtatgggctagcatggagtccc
atggaaaaggggctcttgctcacggcagccgatgacaaatttgtttgcgttagtgatacc
aacagctcgggcaatgcgctcatatttaagagctcggagcaggcagatatcgtgaacgat
gcaaagtggcatttctttgaccagaacctttttgcatcggtttctgaggacgactacacc
ttgctatatgatttgagaaccaaggaggtggtctccaaatatttggccaacaatgcaaag
ggggtcaactccctagctttttcgcccttttcgcacaacttgttggctattggtgcttca
aactccaacattagtttacttgacttgcgaaagttgaacagcaagggaactggcgggtcg
gtgcatacaatgatgggccacacagagggcatcacatgcatggaattctcgccacacaaa
gatggtatattagcctccggtagtcaagatagacgggtgatcttgtgggatttattcaaa
ataggcgaagagcaacaacaagacgatgcagaagatgggtgtcccgagttgtttatgatg
cacgctggccacacagcaggtgtcacagacttgtcgtggtgtcctttcaaaccgtggaca
attggatctgttgctgatgacaacattgtgcatctctggcaaatcagtaaaacaataatt
aacgatgacgaatgggaagacgaaatcgatgaaactatgcttgaatag
DBGET
integrated database retrieval system