Lodderomyces beijingensis: 92206583
Help
Entry
92206583 CDS
T10315
Symbol
LODBEIA_P13870
Name
(RefSeq) uncharacterized protein
KO
K12855
pre-mRNA-processing factor 6
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92206583 (LODBEIA_P13870)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbg03041
]
92206583 (LODBEIA_P13870)
Spliceosome [BR:
lbg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
92206583 (LODBEIA_P13870)
Complex C
U5 SnRNP specific factors
92206583 (LODBEIA_P13870)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_16
ANAPC3
HAT_Syf1_CNRKL1_C
TPR_MalT
Ribosomal_L22
ATP13
INTS1_R4
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
92206583
NCBI-ProteinID:
XP_066828325
LinkDB
All DBs
Position
2:513545..516307
Genome browser
AA seq
920 aa
AA seq
DB search
MSDRLAFLNQEAPEGYVAGVGRGTVGFSTGVDTIYNSRNGPGTDLDDDDDDDNGATANDN
ESGLLASRKRTADEEEEDRVYEALERKLQSRRKTPKSAISPAVQLQNQTQSLNRNATANE
KRTQFNDLKHELSSLSEDDWLSIPEAGDMTRKNKRQRVLEQQSQRLYAVPDSILAGAGEL
GLLNGNGNATAKEKNDALSAQLDNLFPAGPNHNSHHALADSKDLEQQLVAYSQQDAKFAD
LKKGRLVLASLRKNEPYKSSSWIMSSRLEEEAREFSKARDIISQGCKMIPGDEDVWIENI
RLNRNDNQLAKRINKEALSYCSTSEKLWLKSVDLETETRLKKRNAMRGLEDIPRSVPLWK
ALIDLESDEKMAQKLLVKATALCASEWEFWLGLVNLSSYDEAKQYLNKARKSLEGDLKVW
IAACKLEEREHSDVPDSVLVKLTRKAVAENSGLDAEAWYAAAIEASNEGFKKTCNALVTS
YLNAHPADAETLMRQADDYLKTNHTDIAHRILDHLISTTPEDVAVWEKLLSAIKKSSMGA
ETLFAYYRKAIDLNSQSPTFYLMYASDLLKLSSLEKALEVLNEADAKLNDDTVKIAIIDT
FYQCNKLKEAITYVSKLVSDSPTRNPKFWTKYIHMLRCEQASSSEDIIRVCDKALTNFPN
HWQLYDQKIRLLVEDLNDLNQAREVASHAVKILSSANANANANANAATTKVWIAYSQMEE
KLGVLIKARSILDTAMLTFPRAAELGIAKLQLEQRQRNFTAAKTLANVNIKLYPANAHVW
YQYLSLIPKMSTRKNEFVNALQKTQNSSEMLMFLGVFFWRDGKFAKAQSWFERSRAADGG
NGDAWGWSFNYLKQYGTQEERGRLVEDFAKRMNGVDNNNNNNRLHGRITDAIIEDPKCYG
LTPQETLDRIGSLLFDEKSI
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcgactagcatttttgaatcaggaggcaccagaaggctacgtggcgggtgta
ggccgaggcacagtagggttcagcacaggggtggatacaatctacaactcaagaaatggg
cccggcacagatctcgatgatgacgatgacgatgacaatggggccacagccaatgacaac
gaaagtgggcttctcgcatcgcggaaaaggaccgcagacgaagaggaagaagaccgggtg
tatgaagcactcgagcgaaaactacagtcccgtaggaaaacaccgaaatcagcaatctca
ccagcagtgcaactccaaaatcaaacccaaagtctaaaccggaacgcaactgcgaatgaa
aaaaggacacagttcaatgatctcaagcacgagttgagcagcttgtccgaggacgactgg
ttactgatccctgaagctggtgacatgacgagaaaaaacaagcgacagcgagtgcttgag
caacaactgcaacgactatatgctgttcccgactcgattctagctggtgcgggagaattg
gggttgttgaatggaaatggaaacgccacggcaaaggaaaagaatgatgcattgagtgct
caactagataatcttttccccgctggacccaaccacaacagccaccacgcattggccgac
ctgaaggatctagaacagcaactagtcgcatactcccaacaggatgccaaatttgcagat
ttgaaaaaagggagactagtgcttgcatcactaagaaaaaacgaaccctacaaactgagc
tcatggatcatgtcgtctcgtcttgaagaagaagcgcgagaattcagcaaagcgcgcgat
ataatttcacaaggctgcaaaatgatccccggtgacgaagacgtttggattgaaaatatc
cgactaaacagaaacgacaaccagctcgcgaaacggatcaacaaagaggcgctttcgtac
tgcagcacctcggagaaactatggttgaaatccgtcgatttggaaacggagaccaggctc
aagaagaggaacgctatgcgtggacttgaagatattcccagatccgttcccttgtggaaa
gcactaatcgatttggagtcggatgaaaaaatggcgcaaaagttgctagtcaaggccacg
gcattgtgtgcgagtgaatgggagttttggttaggattggttaatttgtcctcctatgat
gaagcgaagcagtacttgaacaaggcgagaaagtcgctcgagggcgatttgaaagtttgg
attgcggcatgcaagttggaggaaagagagcatctggatgttcctgactcagttcttgtc
aagttgaccaggaaagcagttgcggaaaacagcggtctagatgctgaggcatggtacgcc
gcggctattgaagcttcaaatgagggtttcaaaaagacatgcaacgccttagtgacgagc
tatctaaatgcccatcctgcagatgcagaaacgttgatgagacaagccgacgactacttg
aaaacgaaccatactgatatagcccatcgcattttggatcatctaatcagtacaaccccc
gaagatgtagccgtgtgggagaagcttctaagtgcaatcaagaaatcatcaatgggtgcg
gaaaccttgttcgcttactatcgaaaagcgattgacctcaacctgcaactgccaactttt
tacttgatgtacgcaagcgatcttttgaagctctcgagccttgagaaagcactagaggtt
ctcaacgaagccgacgcgaaactcaacgacgacacggtcaagatcgccatcattgacact
ttttaccaatgcaacaaacttaaggaagcaataacatatgtatctaaactagtaagtgac
tcgccaacgaggaatccgaaattctggaccaagtatattcacatgctacgatgtgaacaa
gcttcatcgctggaggacattatcagagtatgcgacaaagccttgaccaatttcccaaac
cactggcaactttacgatcaaaaaatccgccttcttgtcgaagatttaaacgacctcaat
caagctagagaagttgcctcgcacgccgtgaaaattttatctagcgccaacgctaacgct
aacgctaatgccaacgccgccaccaccaaggtatggattgcatattcacaaatggaagag
aaactaggcgtactaatcaaagcgcgttcaatcctcgatacagcaatgttgacatttcct
cgcgcggcagaactcggtatagccaaattgcaactcgagcaaagacagcgcaacttcacc
gccgccaaaaccttagccaatgtcaacatcaagctctaccccgcgaatgcccacgtgtgg
tatcagtacctttcgctcatccccaagatgtccactcgaaagaacgagtttgtcaatgcg
ttgcaaaagacccagaactcgtcggagatgttgatgtttcttggggtctttttctggcgc
gatggcaagtttgccaaagcccaatcgtggttcgagcgtagtcgcgctgccgatggcgga
aatggcgatgcgtggggatggagtttcaattacttgaaacaatatggcacgcaagaagag
cgaggtagattagtggaagattttgcaaagaggatgaatggggtggacaacaacaacaac
aacaacagattgcatgggagaatcactgatgcaatcatcgaagatccaaaatgttatggt
ttgaccccccaggaaacattggatcggattggctcgcttctatttgatgaaaaaagtata
taa
DBGET
integrated database retrieval system
