Lodderomyces beijingensis: 92206869
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Entry
92206869 CDS
T10315
Symbol
LODBEIA_P16730
Name
(RefSeq) uncharacterized protein
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
lbg Lodderomyces beijingensis
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbg03009
]
92206869 (LODBEIA_P16730)
Enzymes [BR:
lbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
92206869 (LODBEIA_P16730)
Ribosome biogenesis [BR:
lbg03009
]
Eukaryotic type
90S particles
Helicases
92206869 (LODBEIA_P16730)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Helicase_C_2
LSDAT_prok
AAA_22
Motif
Other DBs
NCBI-GeneID:
92206869
NCBI-ProteinID:
XP_066828611
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All DBs
Position
2:1221966..1223333
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AA seq
455 aa
AA seq
DB search
MSSTAFQDLGVAKWLSDSLEAMQIRKPTSIQSACIPEILKGRDCIGGAKTGSGKTIAFAS
PMLTQWSEDPFGIFGLVLTPTRELALQIAEQFVALGSQMNIKVCVVVGGEDIVKQALELQ
KRPHFVIATPGRLADHILNSGEETVAGLKRVRYLVLDEADRLLSNSFGSDLERCFSILPA
SDKRQTLLFTATVTDAVKALREKPRSGDKSPVFMHQVESVDKVAIPKTLSTLYVFVPSYV
KEAYLNSILQLAKYKESTAVVFVNRTMTAEVLRRALRKLDFKVASLHSEMPQTERTNSLH
RFKAGAARILIATDVASRGLDIPTVELVVNFDIPADPDDFIHRVGRTARAGRKGDAVSII
GEKDIDRIQSIEERINKKMELLEDVNDDKVIKDSLQLMTTAKREAMMEMDKEGFGERRKT
NKRKRAEDPLPGTDPKVKHKKPSSKSKKEKQVISK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctacggcatttcaagatctcggagtcgcaaaatggctcagcgactcactcgaa
gccatgcaaatacgcaaaccaacgtctattcagtcagcatgcatcccagaaatactcaag
ggacgagattgcatcgggggagccaaaacgggttcgggaaagacgatagcgtttgcctct
cccatgttgacgcagtggtccgaagatccatttggaatatttggacttgtccttacgcca
acgcgggaactcgcgttgcaaatcgccgagcaatttgtcgctttggggtcgcagatgaac
atcaaagtgtgcgtcgttgtcggcggcgaagatatagtcaaacaggcgttggagttacag
aaacggccgcatttcgtgattgccaccccgggcaggttggctgaccatattttgaatagc
ggggaggagacagttgccgggttgaagagagtacggtatttggtgctcgatgaagcggat
cggttattgagcaatagttttggaagcgacttggagcgctgcttctcgatactacctgct
agcgacaagagacaaactttgctattcacggcaaccgtgactgacgcagtcaaggcattg
agggaaaagccgcgctcgggtgataaactgcctgttttcatgcatcaagttgaatcggtg
gataaagtcgctataccaaagaccttgtccacgctctacgtgtttgtgccgtcatatgtc
aaagaggcgtacttgaactcgattttgcagcttgcaaaatacaaagagtcgaccgcggtg
gtgtttgtcaaccggaccatgaccgctgaagtgttgcgaagagcgttgcgtaaattggat
ttcaaagtagcttcgcttcattcggagatgccgcaaactgaacggacaaactcgttgcac
cggttcaaagctggagctgcgagaattctaattgctacggatgtagcatcgagaggattg
gatatacccacggtggaactagtggtgaatttcgatatccctgccgatccagacgatttc
atccatagagtcggtagaactgccagagctggaagaaaaggtgatgctgttagtattatt
ggggagaaggacattgacagaatacagagcatcgaggagagaatcaacaaaaagatggaa
ttgttggaggatgtcaacgatgacaaggtgatcaaggactcgttgcagctaatgacgacg
gcaaagagagaagccatgatggagatggataaggagggctttggagaacgacggaagaca
aacaagagaaaacgcgcagaagatcctttgcctggtacagatcccaaggtcaagcataag
aaaccatcctcaaagctgaaaaaggagaaacaagtgatttctaaataa
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