Lodderomyces beijingensis: 92206893
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Entry
92206893 CDS
T10315
Symbol
LODBEIA_P16970
Name
(RefSeq) uncharacterized protein
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03030
DNA replication
lbg03410
Base excision repair
lbg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
92206893 (LODBEIA_P16970)
03410 Base excision repair
92206893 (LODBEIA_P16970)
03420 Nucleotide excision repair
92206893 (LODBEIA_P16970)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbg03032
]
92206893 (LODBEIA_P16970)
03400 DNA repair and recombination proteins [BR:
lbg03400
]
92206893 (LODBEIA_P16970)
Enzymes [BR:
lbg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
92206893 (LODBEIA_P16970)
DNA replication proteins [BR:
lbg03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
92206893 (LODBEIA_P16970)
DNA repair and recombination proteins [BR:
lbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
92206893 (LODBEIA_P16970)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf-DPOE
zf_DPOE_2
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
92206893
NCBI-ProteinID:
XP_066828635
LinkDB
All DBs
Position
2:complement(1280760..1287410)
Genome browser
AA seq
2216 aa
AA seq
DB search
MPSTSRGGFKGSTTARYVKSENRNGKFKTSEFRNRQHAPVDPHVANNPMLNDSIQRKELV
SRIDHMDSLMGFDRLEHGENDGNKPRKGWLINMHATTIPSQSYLTGYSGVDYYFLDKEGG
SFKATLQYDPYFFVDILSNEFESEIEEWLRKFLESCHVKSFGSVIKEDLSLPNHLLGLKK
SLIKLTFHNINDLLAARRMLVPIVKENQLNKESRDVYTMANDVDASDPSKLISDIKEYDV
PYHVRVSIDKNVRVGKWYNVYAKHSKVELVEDKTLIAFADPVVLAFDIETTKAPLKFPDA
KIDQIMMISYMIDGEGYLITNREIISEDIQDFEYTPKPEYPGLFTIFNEQDEKHVLLRFF
EHIRDVRPTVIATFNGDFFDWPFVENRARFHDLDMFDEIGFAKDNEDEYKSKYCVHMDCF
RWVKRDSYLPQGSQGLKAVTKAKLGYNPTELDPELMCPYAYEKPQLLSEYSVSDAVATYY
LYYKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLSVQAYQGNILLPNKYTDPIERFY
DGHLLESETYVGGHVESLEAGVFRSDIPTHFRVDPTAIDELLGNLHNSIKFCIEVENNKK
MKDVDNFDEVYNEIKTALLDLRDRPVRTEKPLIYHVDVASMYPNIMTSNRLQPDSMISEE
DCAACDFNRPGKNCDRRLPWSWRGEYYPAEMNEYNMIKRTLQNEVFPGQKPWLPERTFDE
LTYAEQASAIKKRISAYSTKVYHRVKQSKVVTREAIICQRENPFYVDTVRSFRDRRYEFK
GLAKVWKSKVNKIDQSNTIARDEANKMVVLYDSLQLAHKVILNSFYGYVMRKGSRWYSME
MAGVTCLTGATIIQMARALVERIGRPLELDTDGIWCILPKSFPENFQLKCKDGKKILLEY
PCSMLNYLVHKDFTNDQYQDLVDPDTFKYKTRSDNSIFFEVDGPYKAMILPTSKEEGKGL
KKRYAVFNEDGSLAELKGFELKRRGELQLIKNFQSDIFKLFLEGDSLESCYQAVATVANN
WLDVLDTKGGMLEDEDLIELICENRSMSKSLAEYGDQKSTSITTARRLGEFLGEDMVKDA
GLATKYIISAKPLGAPVTERAIPVSIFSSEKKEFYMKKWLKDPSLSKFSPRDVIDWEYYY
ERLASVVQKIITIPAALQNVKNPVPRVAHPDWLKKKVEQKANSKQQTSISTFFGSGTTDQ
VKIKDIEDFGEIDGEAAAAAKAKIQSVKSRKRKVGKAQLALDTEAEERNQAVLNGPCPLM
TENYHGFLNYQKAKWMNQSCERDRRKRLFGSQAQSAQRSTVGGMFRKQAENLAGTKWEIL
EYKPDPLKPGDLKVYVSASDKIHTFNFHVPKKVYASFKAPLTSRQTIPGCEIESSNAILP
NGHDSINLYKLTMPQPVFQEQMSNVESVLQSSSILGIYESQISAVERAVIDLGNSVKFDD
TKVGALGKGLKNGFNTKELLKVESENYLKRFDMDIVYLLHIVTSSYEYYAIFKSWDNHCV
MFVLKPTLNAQELPANFHKIYSELYQEKKDRLDRVRRILEYPSEMSSEISYYHDKLKLFQ
KLNRAIGKLHESRSNKSLFAIQSPYADKVLNGLSSTSDFPTVKMASSELSLPAVGWQNLI
SKRVVNHYFALGSWIQNLIALAKYGGVPLCNLQIQNVGYLIDIEYARRLTENNIVLWWSP
NLLPDHGGFENDRAINPENLEFPVINNPEIYETACLEVEIGTLTINTILTSSLINEAEGT
DLADDSVQYDDNNNNGATSFAVDTFSTPALVILRAMVKDWWDDALANNSNADSVMNALIA
WVQKRDSYLYDPSLHYHVHNLSCKALMQLVNEFKRMGSQVIFATRTKLILETSKISVENS
YAYGQYILKAARSKPLFNFLDLNIVKYWDLLIWMDEFNYGGRSCLEITSEEQQSLVVENV
WQLKQYLPIVFREEFDDWLLIFLDALFQHKQTHLMGIGNTQSATQTPTPRVTQIMHILNG
QKKLQTKEINEEDLNEGVVEHFRKPLLKRVEKLYRRQIEAILNPEFKMEYEFPTLPGSHL
SMRNPALQLVKFICAVFQLTKRRNIEMRVLRKELLQVFDVKEFSKQAIFTNPSTSLIIPH
VICDYCNQIRDLDVCREDVDNVWSCTSCRKPYNKIALEEEIIAQFTQLFADFYNQDLKCD
KCSTIRKRNLDLFCNCSGNWVETITYEEVDKRVSIFQNVANFYNLQLLKGWIEEVL
NT seq
6651 nt
NT seq
+upstream
nt +downstream
nt
atgccatctacatccagaggtggcttcaaaggctcaaccactgccaggtatgtcaaaagt
gaaaatcgcaatggtaaattcaaaacttccgagtttaggaaccggcaacacgcgccggtt
gacccccatgtagcaaataaccccatgctcaatgactcgatacaaagaaaagagttggtg
tcccggatagaccacatggactcgttgatggggtttgaccggttggagcacggagaaaat
gacggaaataaaccacgcaaagggtggttgattaatatgcatgccacaacgataccgagc
cagagctaccttactggatactcaggggtggactactactttctcgataaagaaggagga
agcttcaaagctactttgcagtatgatccgtacttttttgttgacatcttgagcaatgag
ttcgaatctgaaattgaagaatggttgcggaaatttttggagagctgccacgtaaagagc
tttggcagcgtcatcaaggaagacttgtccttgcccaaccatttgctaggcttgaaaaag
agtctcatcaagttgaccttccacaatatcaatgatctcctagctgcgagacgaatgctt
gtccccatagtcaaggaaaaccagctaaataaagagtcaagagatgtgtacaccatggct
aacgatgtcgatgctagcgacccctcgaaattgatctccgacatcaaggaatacgatgtc
ccctaccatgttcgagtctcgatagacaaaaatgtcagggtgggcaaatggtacaatgtc
tatgccaagcattccaaagtggaacttgttgaggacaagacgttgattgcatttgccgat
cccgtggtgctagcgtttgatatcgaaaccaccaaggcacctttgaaattccccgatgcc
aagatcgatcaaatcatgatgatatcgtacatgattgacggggaaggatatctcatcacc
aatagagaaatcatctcggaagatatccaagatttcgagtatactccaaagccagagtac
cctggtttattcaccattttcaacgaacaggacgaaaaacacgttttgttgagatttttt
gagcacattcgtgatgtacgacctacagtcattgccactttcaatggtgatttctttgat
tggccctttgttgaaaaccgagcgagatttcacgatctcgacatgtttgatgagattgga
ttcgccaaggacaatgaagacgaatacaagtccaaatactgcgtccatatggactgtttc
cgatgggtcaagcgtgattcgtaccttccacagggttcacagggtctaaaagcggtgacc
aaggccaagttggggtacaaccctacagagttggacccggagttaatgtgcccttatgcc
tacgaaaagcctcagcttctttccgagtactcggtttccgatgcagtggcgacatattat
ttatactacaagtacgttcatccattcatcttttcattgtgtaccatcattcccttgaac
ccagacgaagtgctccgcaaaggtacaggtactctttgtgagatgttgctttcggttcaa
gcttaccaaggcaacatcttgctaccgaacaagtataccgaccccattgagaggttttat
gatggtcatttgttggaatcggaaacatacgtcggtggacatgttgagtcgctagaagcc
ggcgtgtttagaagtgacatcccgacgcatttcagagttgacccaacagcaatcgacgag
cttctaggtaacctccacaactcgatcaaattctgcatagaggtggaaaataacaaaaag
atgaaagacgtggacaactttgatgaggtctacaacgaaatcaaaacagctttgctagac
ttgcgggaccgcccagtgagaactgagaaaccgttgatttaccatgtggatgtcgcgtcg
atgtaccctaacatcatgacgtcgaatcggttacagccagactcgatgatatccgaagaa
gactgcgctgcttgcgatttcaatcggccaggtaaaaactgtgacaggagattaccgtgg
tcatggcgaggcgagtattacccagcggagatgaacgagtacaatatgatcaaaaggacg
ttgcagaatgaagtgtttcccggacaaaaaccatggttacccgaaaggacatttgatgag
ctcacatatgctgagcaggcctcagctatcaaaaagagaattagtgcatattcgacaaaa
gtctaccatcgggtcaagcaaagtaaagttgttacacgagaagccatcatttgccaaaga
gagaaccccttttatgtcgatactgtgcgaagctttagggaccgaaggtacgaatttaaa
ggtttggccaaggtctggaaaagcaaagtaaacaagattgaccagtccaataccattgcg
agagatgaagcaaacaagatggttgtcttgtatgactctttgcagttggcacacaaggtc
atcttgaactccttctacggttatgtcatgagaaaaggatcaagatggtactcgatggaa
atggctggtgtaacgtgtctcactggtgcaaccattatccagatggcaagagcactagtt
gaacggattggaagacccttggagttggacacagatggtatctggtgcatcttgcccaaa
agctttcccgagaattttcaactcaaatgcaaagatggtaaaaagattcttttggagtac
ccgtgctccatgttgaactatttggttcacaaggatttcaccaatgaccagtaccaggat
ttggttgatcccgacactttcaagtacaagacaaggtcagacaactccatctttttcgaa
gttgatgggccgtacaaagcgatgattttgcccacttcaaaagaggaaggcaaggggttg
aagaaaagatacgccgtctttaatgaggatggatcgcttgcggaattgaaagggtttgag
ttaaagagaagaggtgagttgcaattgatcaagaatttccaatcggacattttcaaattg
tttttggaaggagacagcttggaatcatgctatcaagcggtggctacagtggccaataac
tggttggatgtgctcgacaccaaaggaggaatgttggaggacgaagacttgattgagctt
atttgtgaaaatagaagcatgtcgaagagcttggccgaatacggggatcaaaaatccacc
tccatcacaacggcgaggagactaggcgagtttttgggcgaggacatggtcaaagatgcc
gggttggcaacaaaatacattataagtgccaagcctctaggtgcgccagttaccgaaaga
gccatccccgtttccatcttttcgtcagaaaagaaggaattttacatgaagaaatggtta
aaggatccatcgttgtcgaaattcagtccgagggacgttatcgattgggaatattactat
gagagattggcctcggttgttcaaaagattataaccattcccgctgcgttgcaaaatgtc
aagaaccctgttccaagagttgcccacccggattggttaaagaaaaaagtggagcaaaag
gccaactctaagcaacaaacttccatctctacgtttttcggttccgggacaacagaccaa
gtcaagattaaggatattgaagattttggagaaatcgatggcgaggcagcagcagcagca
aaggcgaaaatccagagcgtgaaatcacgcaagaggaaagtaggcaaggcccagttggct
ttagacacagaagcagaagaaaggaatcaagcggtattgaatgggccgtgtcctttgatg
acggaaaattatcatggctttttgaattatcaaaaggcaaaatggatgaaccagtcttgt
gaacgggacaggaggaaaagactatttggaagccaagcgcaaagtgcgcaacgatcaacg
gtgggtggcatgtttagaaagcaagctgagaatcttgcaggtaccaaatgggagatattg
gagtataagccggacccattgaagcccggtgatttgaaagtttacgtttctgcctcggac
aagatccacacctttaattttcatgtccccaaaaaagtgtatgcttctttcaaggccccg
ctcacttcaagacagactatccctggttgtgaaattgaatcctcaaatgccatcttgccc
aatggacacgatagtattaacttgtacaagttgacaatgcctcaaccagtttttcaagag
caaatgtccaacgtggaaagtgtattgcagagctctagtatattgggaatctacgagagc
cagatctcggcagtcgagagagcagtgattgatttgggcaattctgtcaaattcgatgac
accaaagtcggtgcgttgggcaaaggattgaagaatgggttcaacacaaaggagttgctc
aaggtggaatctgaaaattacttgaagagatttgatatggacattgtctatttactccac
attgtcactagcagctacgagtattatgctattttcaaatcatgggacaatcactgcgtc
atgtttgtgttgaagcccactttgaatgcacaggagttgcctgctaactttcacaagata
tactccgagctatatcaagagaagaaggacagattggatagagtgagaaggattctcgag
tatcctctggaaatgtcgagcgaaatctcgtactaccatgacaagcttaaattgtttcaa
aaattgaaccgtgcaattgggaagttgcacgagagcagaagcaacaagtccctatttgca
atccagtccccttacgctgacaaagttcttaatgggttgagttccacactggactttccc
accgtgaaaatggcaagcagtgagctctcattgcctgcggtgggttggcaaaatctaatc
tcgaaaagagtagtcaatcactactttgctttgggctcttggatccaaaacttgatagct
ttggccaaatatggtggcgttccgttatgtaatttgcaaattcaaaacgttggatatttg
atcgatatcgagtatgcaagaagattgacggaaaacaacattgttttatggtggtccccc
aacttgttacctgatcatggcgggtttgaaaatgatcgcgctataaaccctgagaacttg
gagtttcccgtcatcaacaaccccgagatttacgaaaccgcgtgcttggaggttgagatt
ggcacgcttaccatcaacaccatcttgacgagctcgttgatcaatgaagccgagggaact
gatttagctgacgactcggtgcaatacgacgacaacaacaacaatggcgcaacttcgttt
gccgttgatactttttcaaccccggctctagtaatattgcgagccatggtgaaagattgg
tgggatgatgcattggcaaacaactccaatgctgactcagtgatgaacgcgttgattgca
tgggtgcagaagagggactcgtatctctatgacccatcgttgcattaccacgtccataat
ttgagttgcaaggcgttgatgcagttggtgaatgagttcaagagaatgggatcgcaagtg
atatttgcgactcggacaaaattgattcttgaaacatccaaaatatcagtggaaaactct
tatgcatacggtcaatacatcttgaaagcagcaaggtccaagccgcttttcaattttctc
gacttgaacattgtcaagtactgggacttgttaatctggatggacgaattcaactatggt
ggacgaagctgtcttgaaatcaccagcgaggaacaacagagtctagtcgttgaaaatgtc
tggcaattgaagcaatacttgcctattgtgttccgagaagagtttgatgattggctcttg
atatttttggacgccttgtttcaacacaagcagacgcatttgatgggaattggcaacacg
caatctgcaactcagactccaacgccgagggtcactcagattatgcacattctcaacggg
caaaagaaattgcagaccaaggaaatcaatgaagaggacttgaacgagggcgttgttgag
catttcagaaaaccattgctcaagagagttgaaaaattatatcgtcgtcaaattgaggca
atcttgaaccccgagttcaagatggaatacgagttccccacgctccctggctcgcacctt
tcaatgcgcaaccctgcgcttcagcttgtcaagtttatttgcgccgttttccaactcaca
aagagaagaaacattgaaatgagggtcttgcgcaaggagttgttgcaagtgtttgacgtg
aaggagtttagcaagcaggccatctttacaaacccgagcacatcgctcatcatcccgcat
gtcatttgcgactattgcaatcaaattcgcgatctcgatgtgtgtcgagaagatgtcgac
aatgtgtggagctgcacgtcgtgccgcaaaccatataataagattgcacttgaagaggaa
atcattgcccagttcacgcaacttttcgccgatttctataatcaggatttaaaatgcgac
aagtgctcaactattaggaaacgcaacttggacttgttttgcaattgttctggtaactgg
gttgaaactattacttacgaagaagttgataaacgtgtactgatttttcagaatgttgcc
aatttttacaatttgcagcttctcaagggttggattgaggaagtcttatag
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integrated database retrieval system
