Lodderomyces beijingensis: 92207016
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Entry
92207016 CDS
T10315
Symbol
LODBEIA_P18200
Name
(RefSeq) uncharacterized protein
KO
K12856
pre-mRNA-processing factor 8
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92207016 (LODBEIA_P18200)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbg03041
]
92207016 (LODBEIA_P18200)
Spliceosome [BR:
lbg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
92207016 (LODBEIA_P18200)
Complex C
U5 SnRNP specific factors
92207016 (LODBEIA_P18200)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
U5_2-snRNA_bdg
PRO8NT
RRM_4
PROCT
JAB
NOP2_rpt
Motif
Other DBs
NCBI-GeneID:
92207016
NCBI-ProteinID:
XP_066828758
LinkDB
All DBs
Position
2:1611786..1619129
Genome browser
AA seq
2447 aa
AA seq
DB search
MGKKILPPPPPSSLKSHQKRAPEKEHSNSLPLPPPPPPPSSSSSRLPPPPGPPPPRTKAF
PSQPPPPPPPRRTPTTKRIPDAPTSNGKKPRTVARPPEGIAVNGLGRDATSALVLSSKNE
LEIRKRKWTQLQKQRFKAAAAAVGGFSGAPSVQTRPIEMPPQHLRKIISDHADMASQKVT
KDKRSHLGSLKYLPHALFKLLENIPQPWEPSKEVKVLYHKTGAITFVDEIPRVIEPVYTA
QWAATWTAMRREKRDRKHFKRMRFPPLDDEERFLGWLENFDDVDLPAAVRSNDIEEKTEP
GAEPEAEKSVEGWFYDDKPLLDKESHVNGSSYRKWSLDPLTMKTLLDVSQPILNGSGSHF
RLNELISAKSLSISIPGGPKFEPLNRNKLGDAQLEDFTDFDSLDKIILRGEIKPESKVDY
PHVFNSFVNAVEVGNLHAEPSFRFRQSHGQNESVSNFGFNPTYAPVVKRGAATQKPDFFS
KEVAVVPFLQNEGLAKFTGLEQKTLNAALGLLDAPFPFNRRTGRTKRAEDVALTKSWYVS
STTRSSPLKTRISSQKLLKNQVLNQLRKNRKSESASKKTAKGGIIKGLKSTKYFHSTRID
WLEAGIQVCQQGFEMLNLLIHKRGLTYLHLDYNFNLKPTKTLTTKERKKSRFGNAFHLIR
ELLRAIKMIVDSHVQYRLGNVDAYQLADGIYYVLNHLGQLTGIYRYKYKVMHQIRQCKDF
KHIVYHRFNKLIGKGPGCGFWQPAWKVWIFFLRGTIPLLERWLGNLIARQFEGRRYNDTA
KTITKQRVDSYYDLELRAQVMHDILEVIPEGMKQSKSKVILQHLSEAWRCWKANIPWHVP
GLPEPIRKIIERYIKAKAEGWISVAHYNRERIRKGTHVEKTVVKKNLGRLTRLWVKNEQS
RQQDFGKNGSYVSPDEAVKIFQNTISWLESRNFSPIPFPPISYKHDTKLLLLALENLKSS
YNANAKLNSAQREELALIEQAYDNPHECLARVKKHMLTQRIFKEAGLEMMDFYSHLSPVY
SIDPLEKITDAYLDQYLWYEADKRRLFPNWIKPADDEIAPLTVYKWCQGVNNLKDVWSTS
HGECNVMFETSLTEFSEKVDFTLMSRLLRLIMDPNIADYLTSKNNINIRYKDMNYVNQYG
LIRGLSFSSFLYQYYGLVVDLLILGLERASQLAGPVQAPNNFLQFQDADVQTASPLRLYS
RNLNKIHILFRFTHEEAESLIHDFLDVDAAHEELAGYNNHRCWPKDSRMRLIRHDVNLGK
AVFWEVSSRIPSSLAAISWSSTFASVYSRDNINLLFQMNGFEVRILPKAHLSETSQTQEN
VWDLVDNRTQERTARAYLQVSQEAIDHFRNRIRQILMSSGSSAFTKVAAKWNTALISLVT
YFREAAVATPALLDVLVKCETKIQNRIKMGLNSKMPSRFPPAVFYTPIELGGLGMLSASH
VLIPASDLKWSKQTDSGITHFRAGMTHDDDKMIPTVFRYVTTWENEFLDSQRVWAEYSIK
REEAMAQNRRLTFEDMEGNWDRGIPRISTLFQKDRHTLAYDKGHRVRRVFRHFGNGRFNP
FAWTNGHHDGKLWNLNAYRADVIQALGGIETILEHTLFKGTGFDSWEGLFWEKASGFEDS
LKFKKLTNAQRTGLSQIPNRRFTLWWSPTINRANVYVGFLVQLDLTGIFLHGKIPTLKIS
LIQIFRAHLWQKIHESVVQDLCQVFDKEQEVLSIDLVEKQAIHPRKSYRMNSSTADIVFT
STYRWNASKPTLLNDKDDAMILSTKTFWIDVQLRYGDYDSHDISRYARSKYLDYTTDGTS
SYPSPTGIVIAIDLAYNMYDAYGNWFPGLKALVRNALKEIMKANPALYVLRERIRKGLQL
YHAKPSESFLNSNNYAELFNNDVQLFIDDTNVYRVTVHKTLEGNLATKPINGCVFILNPR
TGQLYLKVIHTSVWAGQKRLSQLAKWKAAEEVTALIKSLPKEEQPKQLIVARKGMMDPLE
VHMLDFPNISIRPSELHLPFAAIMKIDKLSEVVLRATEPQMCLFNFYDDWLERISPYTAF
SRIILILRALNVDSISATQILWQQGDDAEAPAHHIWPTLTDDQWVDREARLRDLILEEYS
AKYNIDVQSLTQSEIRDLILGQDIRAANFRRQQLSNVDKKAPQVENKDLAAIKSSTTNIH
GEKITTVTTTNYEQTTFSSRNEWKNRALATTSLLSRANKISVSSNDLIEDDDYTFIVPKN
ILQKLVQVSDSRIQVGGFIYGKSPEGHPEVKEIRCIAVVPQLGSSNSIQFPRQKPVSHDG
YLENQGLELLGWIHTSARESESMSSNDLTMQAQMLDKYDPRFVCITASINAGSVTLAGFE
TTQEGFDWGKENQDMLSASPEGFRSDFSTKSQLILSDKIVGTYMTPEDDIWNYFFMGAIF
NRNDLYSMKVDIPLPFYDVVHRPIHFTNFSNLIAEREEEAVQEDVFG
NT seq
7344 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaaaatactaccgcctccgcccccttcatctttgaagagccatcaaaagagg
gcgccggagaaggagcactcgaactcactcccattaccaccgcctccacctccaccatca
tcatcatcatcacgattaccaccaccaccaggaccaccaccaccaagaacaaaagctttt
ccctctcagcctccgcctccgcctccgcctcgtcgaacgcctaccaccaaacgcattcca
gatgccccgacctcaaatgggaaaaaaccgcgtacggttgcgcgaccgccagagggaata
gctgtcaatgggctcggaagggatgcgacaagtgcacttgttctttccagtaagaatgag
ctcgagatccgcaaacggaaatggacccagctccagaaacaaaggttcaaagcagcagca
gcagcagtgggggggttctcgggcgcgccctcggtgcaaacgagacccatcgaaatgcct
ccgcagcacttgcggaagatcatcagtgaccacgccgacatggctctgcaaaaggtgaca
aaagacaagcgatctcatttgggctcgctaaagtacttgccgcacgcgttgttcaagttg
ttggaaaacattccacagccctgggaaccgtcaaaggaggtgaaagtgttgtaccacaag
accggtgcaataacttttgtcgatgagataccgcgggtcatcgagcctgtgtacaccgca
caatgggcagccacttggacagccatgcgcagggaaaagcgagataggaagcatttcaag
agaatgaggttcccgccgctagacgacgaggaacggttcttggggtggctcgagaacttt
gacgacgtggacttgcctgctgcagtccgctcgaatgatatcgaagaaaaaactgaacca
ggagcagaaccagaagcagaaaaatctgttgagggctggttttacgacgacaagcctttg
ctcgataaagagagccacgtcaatggatcgtcgtatagaaaatggctgctcgacccactc
accatgaagaccttgctagatgtgtcgcaaccgatcttgaacggctcgggactgcatttt
cgtctcaatgaactcatttctgccaagagtctcagcatatcgataccgggcggacctaaa
tttgagcccctcaacaggaacaaactaggcgatgcccagctcgaagacttcaccgacttt
gactcgttggacaaaatcatcctcagaggcgaaataaaacccgagtccaaagtcgactac
cctcatgtcttcaactcatttgtcaatgcagtcgaggtgggaaatttgcacgctgaacca
agcttcagattcagacagtcacacggccagaacgagtcggtatccaatttcgggtttaat
ccaacgtatgcccccgtggtcaaaagaggagcagcaacgcagaagcccgattttttcagc
aaagaggtggccgttgtgccatttttgcaaaacgagggacttgcaaaatttacgggtttg
gagcagaagacgttgaatgctgctctaggtttactagacgcgccctttccgttcaatcgt
cgtactggaagaacaaaacgagcagaggatgtcgcattgacaaagtcgtggtatgtatct
ctgaccactagatcgagccctttaaagacacgaatatcgtctcaaaagttgttgaagaac
caggtgctcaatcaattgcgtaaaaatcgaaagctggaactggcactgaaaaagactgcc
aaaggcgggatcatcaaggggttaaagtctacaaagtacttccacctgacgcgtattgac
tggttggaagccggtatccaggtctgtcaacaaggtttcgaaatgttgaatttgttgatc
cacaagcgggggttgacgtatctacacttggactacaacttcaacttgaagccaaccaaa
acgttgactacaaaagaacgcaaaaagtcgaggttcggaaatgcattccatttgattcga
gaattgctcagggccattaaaatgattgttgactcgcatgtgcaataccgcttggggaat
gtcgacgcataccaattggcggatgggatatactacgtcttgaaccacttgggacaatta
acgggtatctacagatacaagtacaaagtgatgcaccaaatacgacagtgtaaggacttc
aaacacattgtctatcacaggttcaacaagctcatcggcaaaggacccggttgcggcttt
tggcaaccggcctggaaggtgtggattttcttcttgcgaggaacgattcctctcttggaa
cgatggctcggaaatttgatagccagacagttcgaagggcggcggtataatgatacggcc
aagactataaccaagcaacgagtggactcttactacgacttggagctcagagctcaagtg
atgcacgacattttggaagtcatcccggaagggatgaagcaaagcaaatcaaaggtgatt
cttcagcatttgagcgaggcctggagatgctggaaggcaaacattccgtggcacgttcct
ggactaccggagcccataaggaagatcatcgagcgatatattaaggcaaaggccgagggc
tggatctcggttgctcattacaacagagaaaggatacggaaggggactcatgttgaaaag
acagtggtgaagaaaaacttgggcagattgacgcggttatgggtcaaaaacgagcagtcg
agacagcaagactttggaaagaatggctcatacgtgtctcccgatgaggcggtcaagatt
ttccaaaacactataagctggttggagagccgaaactttagtcccatacctttcccccca
atttcttacaagcacgacaccaagcttttgttgcttgcgttggagaacttgaaatcctcc
tacaatgcaaatgcaaaactcaactctgcgcagcgagaagagctagccttgatcgaacag
gcttacgataacccgcatgagtgcttggctcgagtcaagaagcacatgttgacccagcgg
attttcaaagaagcagggctagagatgatggacttttacagccacttgtcgcctgtgtat
tcaatcgatcctttggaaaaaatcactgatgcctatctcgaccagtatctctggtacgaa
gccgataagagacgccttttccccaactggatcaagcccgctgacgacgaaattgccccc
ttgactgtttacaagtggtgccagggagtaaacaatttgaaggacgtgtggctgacctcg
catggcgagtgtaacgtgatgttcgaaacgagtctaacggagttttcggaaaaagtggac
tttacactcatgagcaggttgctccggttgattatggatccaaacattgccgactattta
acgtcaaagaataatatcaacataaggtacaaggacatgaactacgtgaaccaatacggt
ctcattcgaggcttgctgttttcctcgtttctttaccagtactacggcttggtggtcgac
ttgctcattctaggtttggaaagagcctcgcaactagcgggccccgtgcaggctccaaac
aattttttgcagtttcaagatgcggatgtgcagacagcgtcgcctttgcgtttgtattca
agaaacttgaacaagattcacattttgtttcgattcacgcatgaagaggcagagtccttg
attcacgactttttggatgtagatgccgcccacgaggagctcgctggttacaataatcac
cggtgctggccaaaagattccagaatgaggttgattcggcacgacgtaaacttgggcaag
gctgtgttctgggaggtgagctctcgcattccgtcgtctttggctgccatcagctggagc
agcacatttgcctcggtgtattcgagagataacataaatctattgttccagatgaatggg
tttgaagtgcgcattctacctaaagcacacttactggaaaccagccaaacacaggagaat
gtttgggacttggtcgataatcgcacccaggagagaacagccagggcctatttgcaggtc
tcccaggaagcaattgaccatttcagaaaccggatacggcagattttgatgtcttccggt
tcaagtgcattcaccaaggtggcagcaaagtggaacacggccctcatttcgttggtgacc
tatttcagagaagcagccgtggcaacgccggctctcttggacgttttggtcaaatgtgaa
actaaaatccagaataggatcaagatgggtctcaattccaaaatgccatcacggttccca
ccagcggttttttatacaccgattgagctcggtggactagggatgctaagcgcttcgcat
gtcttgataccggcatccgatttgaaatggtccaaacagactgactccggtatcacccat
ttcagagctgggatgacccatgatgacgacaaaatgattcctaccgtgtttcggtacgtt
acaacgtgggagaatgagtttcttgactcgcaaagggtctgggcagaatattcaatcaag
agggaagaagccatggcccagaaccgtcgactcacatttgaagacatggagggaaactgg
gaccgaggtataccgagaatcagtacattgttccagaaagatagacacactttggcgtat
gacaagggacatagggtgcgcagagtatttaggcatttcgggaacgggcgctttaatccg
tttgcgtggaccaatggacaccacgatggtaaattgtggaacttgaatgcgtaccgagca
gacgtaatccaggcgcttggcggcattgaaaccattttggagcacactttgttcaaaggc
acggggttcgactcttgggaaggcttgttctgggagaaggcgtcaggattcgaggactcg
ttgaagtttaaaaagttgacaaacgcgcaacgaacaggtttgagccagattccgaatcgt
cggttcacactatggtggtcccccaccatcaaccgagccaacgtctacgttggcttcttg
gttcagctagacttgacgggaatttttttgcacggcaagatcccgacactcaagatttcg
cttatccagatattcagggcgcatctttggcagaagatccacgagagcgtggtgcaggac
ttgtgccaggtgtttgataaggagcaggaggttttgctgattgacttggttgaaaaacag
gccatacacccgcgcaagtcgtacagaatgaattcatctacagctgatatcgtcttcact
agtacctacaggtggaacgcatcgaagcccacacttctcaatgacaaggacgacgctatg
atcttatccaccaagacattctggatcgacgtgcagttgcgatatggcgactacgactcg
cacgatatatctcgatacgcgaggtcaaagtacttggactacaccaccgacggcacaagc
tcgtatccttcaccgacggggattgtcattgccatcgacttggcgtacaacatgtacgac
gcgtatggcaactggtttcctgggctcaaggccctcgtgagaaatgctttgaaggaaatt
atgaaagcaaacccggccctatacgtgctacgcgaacggatccggaaaggtctacaattg
taccatgccaagccgctggaatcgttcttaaactccaacaactatgcggagttgttcaac
aacgacgtgcagttgttcattgatgacacaaatgtctaccgtgtcaccgtgcacaagacc
ctcgagggcaacttggccaccaagcctatcaacgggtgtgttttcattctcaatcctaga
accggccagttgtacttgaaggttatccacacctcggtctgggcggggcagaagcggttg
agccagcttgccaaatggaaagctgctgaagaggtgactgcccttatcaagtcgttgccc
aaagaagagcagcctaaacagttgattgtcgctcgaaaaggtatgatggatccattggag
gtgcacatgctagactttcccaacatttcaatcaggccctcggagttgcatttgccgttt
gcggccatcatgaagattgataagttaagcgaagtggtgttgagagccaccgagccgcag
atgtgtcttttcaacttttacgacgactggctcgagcgcatctcaccgtacactgcgttc
tcgcggattatcttgatactccgggcgcttaatgttgattcaatcagcgcgactcaaatc
ctttggcagcagggtgatgacgccgaggcaccggcgcatcacatatggcccacgttgacg
gacgaccagtgggttgaccgcgaagctcgattgagagatttgattcttgaagagtactct
gcaaagtataatatcgacgtacaatcattgacccagtcggaaatcagagacttgattcta
ggacaagacattagagctgctaatttcaggcgacaacagctcctgaatgtcgataaaaag
gcgcctcaagtggagaacaaggacttggctgccattaaatcgtcaacaacaaacatccac
ggcgagaagattacgactgtcaccacgaccaattacgagcaaaccacgttctcgtcgaga
aacgagtggaaaaatcgagcgcttgcaaccacgagcttgctcagtcgcgcaaacaagatc
tctgtcctgtccaacgatctaatcgaggacgacgactacaccttcattgtgcccaaaaac
attttgcagaaattggtgcaggtttcggatctgaggatccaggttggcggatttatatac
ggcaagtctcccgagggccacccggaagtgaaagagattaggtgcattgcagtggttccg
cagttgggaagctcgaactcgattcaattcccccggcaaaagccggtgagccatgatggg
tacttggagaaccaagggttggagctactaggctggatccacaccctggcgcgcgaatct
gagagcatgagctctaacgacttgacaatgcaagcgcagatgttggacaaatacgaccct
agatttgtgtgcattaccgcttcaattaacgccggctcagttactttagccgggtttgag
actacgcaagaaggcttcgactggggaaaagagaaccaggacatgctatcagcctcgccc
gaagggttccgttccgatttctcgacaaagagccagctcatcttgtctgataaaatcgtg
ggtacttacatgactccggaagacgacatttggaactactttttcatgggagcaatattc
aaccgcaatgatctctactcgatgaaggtcgacattccacttcccttttacgatgttgtg
caccgccccatccatttcaccaatttctcgaatttgattgcagaaagagaagaagaagcc
gtccaagaagatgtatttggatga
DBGET
integrated database retrieval system
