KEGG   Lodderomyces beijingensis: 92207150
Entry
92207150          CDS       T10315                                 
Symbol
LODBEIA_P19540
Name
(RefSeq) uncharacterized protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
lbg  Lodderomyces beijingensis
Pathway
lbg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lbg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    92207150 (LODBEIA_P19540)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lbg03041]
    92207150 (LODBEIA_P19540)
Spliceosome [BR:lbg03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    92207150 (LODBEIA_P19540)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_TEP1_C NBCH_WD40 PRP4 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_WDR75_2nd Beta-prop_SPT8 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_DCAF4 WDR54 Beta-prop_DCAF12 HMG_CoA_synt_N
Other DBs
NCBI-GeneID: 92207150
NCBI-ProteinID: XP_066828892
LinkDB
Position
2:complement(1995828..1997171)
AA seq 447 aa
MEFGEVPVINDVKVPDEDEKVKEELQKLGQPVFINGEGEAERRQRLLHLRAAEVDESDDE
DDGGDEDEEFYTPGPQELYDVRSRILRDSLGRASARLEWQRRFAKANQEFTTILQKRRDI
NSKLATVDLYGSQVIPDVTRAVSSVKFSPASDLVGCGSWDGSVHVLSSTDLQPVVKLAVS
HSEKVGALNWKPGCKQRVLLSGGNEGTINVWDITPSESSQTSPGIPIVSIKDAHSDRITS
TLYHPVNELAISTSFDQTWKLWDVSRQTELYQQEGHSKGVFTGSIHPDGSLFVSGGLDGI
IYVWDLRSGRALMPLQKHIQGIYGLDWSPNGHQFASASGDCSVKIWDMRKLDRSGDEIAT
IPAHTKLVSDVKFFQGEGEGEDRGTFLITSSYDGSLNIWSADNWIRVNSMQSYNDKIMSC
DVAVIDSSYTMVSGGWDKSIRLWKQNQ
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggagtttggtgaagtgcccgtgatcaatgacgttaaggtgccggatgaagacgaaaaa
gtcaaggaagagcttcaaaagttgggacagccggtgttcatcaatggcgaaggagaagca
gaaagacgacagcgactattgcatttacgagctgcggaagtcgacgagtccgatgatgaa
gatgacggtggagacgaagatgaagagttttatactccgggtccgcaagaactatatgac
gtcagaagtcgcatactccgtgattcgttggggagggcatctgctcgactagaatggcaa
cgacgatttgctaaagccaaccaggagttcactacaatcttgcagaaacgacgagacata
aactcgaaactagccacggttgacttgtatgggtcgcaggttatccccgatgtcacgcgg
gcagtctctagtgtcaaattttcccccgccctggacttggtgggatgtggttcgtgggac
gggtctgttcacgtcttgagcagcaccgacttgcagcccgtggtgaaattggccgtatcg
cactcggagaaagttggagcattgaattggaaacctggctgcaagcaacgtgtcttgtta
tcgggaggcaatgaaggtaccatcaatgtatgggacatcacaccgagcgaaagttcccaa
acctctccaggcatccccatagtgtcaatcaaggacgcccacagcgacagaatcacaagc
acactataccaccccgtaaacgagctcgctatttcaacctcgtttgaccaaacttggaaa
ttatgggacgtatcaagacaaaccgagttatatcaacaagaaggacactccaagggtgta
ttcacgggctcgatccaccccgatggctcacttttcgtttcgggaggtctcgatggtata
atctacgtgtgggacttgagatccggcagagcattgatgccgttgcaaaaacacatccag
ggcatatatggactagactggtcgcccaacgggcatcaatttgcaagtgcctcgggtgac
tgttcagttaaaatctgggatatgaggaaattggaccgttcaggggacgaaatagccacg
ataccagcgcacactaaactcgtcagtgacgtcaagttcttccaaggtgaaggtgaaggt
gaagatagaggtactttcctaattacaagttcctacgatgggtcgctcaacatatggtcg
gctgataattggatcagagtcaactccatgcagagttacaatgacaagatcatgagctgc
gacgtggccgtgatagactccagctacactatggtcagcggaggatgggataaaagtata
cgactctggaaacaaaatcagtga

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