Lodderomyces beijingensis: 92207150
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Entry
92207150 CDS
T10315
Symbol
LODBEIA_P19540
Name
(RefSeq) uncharacterized protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92207150 (LODBEIA_P19540)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbg03041
]
92207150 (LODBEIA_P19540)
Spliceosome [BR:
lbg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
92207150 (LODBEIA_P19540)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
NBCH_WD40
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_DCAF4
WDR54
Beta-prop_DCAF12
HMG_CoA_synt_N
Motif
Other DBs
NCBI-GeneID:
92207150
NCBI-ProteinID:
XP_066828892
LinkDB
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Position
2:complement(1995828..1997171)
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AA seq
447 aa
AA seq
DB search
MEFGEVPVINDVKVPDEDEKVKEELQKLGQPVFINGEGEAERRQRLLHLRAAEVDESDDE
DDGGDEDEEFYTPGPQELYDVRSRILRDSLGRASARLEWQRRFAKANQEFTTILQKRRDI
NSKLATVDLYGSQVIPDVTRAVSSVKFSPASDLVGCGSWDGSVHVLSSTDLQPVVKLAVS
HSEKVGALNWKPGCKQRVLLSGGNEGTINVWDITPSESSQTSPGIPIVSIKDAHSDRITS
TLYHPVNELAISTSFDQTWKLWDVSRQTELYQQEGHSKGVFTGSIHPDGSLFVSGGLDGI
IYVWDLRSGRALMPLQKHIQGIYGLDWSPNGHQFASASGDCSVKIWDMRKLDRSGDEIAT
IPAHTKLVSDVKFFQGEGEGEDRGTFLITSSYDGSLNIWSADNWIRVNSMQSYNDKIMSC
DVAVIDSSYTMVSGGWDKSIRLWKQNQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggagtttggtgaagtgcccgtgatcaatgacgttaaggtgccggatgaagacgaaaaa
gtcaaggaagagcttcaaaagttgggacagccggtgttcatcaatggcgaaggagaagca
gaaagacgacagcgactattgcatttacgagctgcggaagtcgacgagtccgatgatgaa
gatgacggtggagacgaagatgaagagttttatactccgggtccgcaagaactatatgac
gtcagaagtcgcatactccgtgattcgttggggagggcatctgctcgactagaatggcaa
cgacgatttgctaaagccaaccaggagttcactacaatcttgcagaaacgacgagacata
aactcgaaactagccacggttgacttgtatgggtcgcaggttatccccgatgtcacgcgg
gcagtctctagtgtcaaattttcccccgccctggacttggtgggatgtggttcgtgggac
gggtctgttcacgtcttgagcagcaccgacttgcagcccgtggtgaaattggccgtatcg
cactcggagaaagttggagcattgaattggaaacctggctgcaagcaacgtgtcttgtta
tcgggaggcaatgaaggtaccatcaatgtatgggacatcacaccgagcgaaagttcccaa
acctctccaggcatccccatagtgtcaatcaaggacgcccacagcgacagaatcacaagc
acactataccaccccgtaaacgagctcgctatttcaacctcgtttgaccaaacttggaaa
ttatgggacgtatcaagacaaaccgagttatatcaacaagaaggacactccaagggtgta
ttcacgggctcgatccaccccgatggctcacttttcgtttcgggaggtctcgatggtata
atctacgtgtgggacttgagatccggcagagcattgatgccgttgcaaaaacacatccag
ggcatatatggactagactggtcgcccaacgggcatcaatttgcaagtgcctcgggtgac
tgttcagttaaaatctgggatatgaggaaattggaccgttcaggggacgaaatagccacg
ataccagcgcacactaaactcgtcagtgacgtcaagttcttccaaggtgaaggtgaaggt
gaagatagaggtactttcctaattacaagttcctacgatgggtcgctcaacatatggtcg
gctgataattggatcagagtcaactccatgcagagttacaatgacaagatcatgagctgc
gacgtggccgtgatagactccagctacactatggtcagcggaggatgggataaaagtata
cgactctggaaacaaaatcagtga
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