Lodderomyces beijingensis: 92207353
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Entry
92207353 CDS
T10315
Symbol
LODBEIA_P21570
Name
(RefSeq) uncharacterized protein
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
lbg Lodderomyces beijingensis
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbg03041
]
92207353 (LODBEIA_P21570)
03009 Ribosome biogenesis [BR:
lbg03009
]
92207353 (LODBEIA_P21570)
Enzymes [BR:
lbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
92207353 (LODBEIA_P21570)
Spliceosome [BR:
lbg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
92207353 (LODBEIA_P21570)
Ribosome biogenesis [BR:
lbg03009
]
Eukaryotic type
Pre-60S particles
Helicases
92207353 (LODBEIA_P21570)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Uso1_p115_head
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
92207353
NCBI-ProteinID:
XP_066829095
UniProt:
A0ABP0ZIE3
LinkDB
All DBs
Position
3:73167..75074
Genome browser
AA seq
635 aa
AA seq
DB search
MAKEDDLILTIDSDVEVENDAAESSDEEEIVTQGKDDEAGNEGKRDMNPDFHFSMGDGFD
EIQDWEVEEPSNDIDLNAIIKKKRRDQIESESQGESEGEGDDDDDEEEEDCKSHTKDEEE
GDDKDEEDNQEDIDNFYEAQETTSSTTTKSFQDLQLSRPILKCLQTMGFTQPTPVQASTI
PIALLGKDIVAGAQTGSGKTAAYLIPIIERLLFKNSTSTKAIILAPTRELAIQVFDVGRK
LGQYVQNLNFGMAVGGLSLKQQEQQLKTRPDIVIATPGRLIDHIRNSPSFSVEDVQVLVI
DEADRMLEEGFQEELTEILQLIPKYKRQTLLFSATMNTKIQDLVQLSLNKPVKVMIDPPK
TVASKLKQQFVRIRKREELKPALLYLLLKKLEGRVVVFVRTKVEAHKLRIILGLLGLTVA
ELHGALTQEQRLANVKAFKQSVNVLICTDLAARGLDIKIEYVINYDMPKTYEIYLHRVGR
TARAGRKGTSITFVGESNQERSIVKSAITNGQSVARKVDWNEVEAVNDKIKNSEGAIDEV
LQEEKQAREIMHAEMQLNKAENLMKYEKDIKARPKRTWFKSEVMEQLTKHGKKVNSKKRK
VNEERKENKGERSYKKTKADRTAKASNKKSSKKKR
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggaagacgatctcatacttacaatagacagcgatgttgaagttgaaaatgat
gctgccgaatcctcagacgaagaagaaattgtaactcagggaaaggacgatgaagcaggt
aacgaaggtaaaagagacatgaaccccgatttccatttctccatgggggatggcttcgat
gaaatccaagattgggaagtcgaagaaccatcgaatgacatagacttgaacgcaattatt
aagaagaaaagaagggaccagattgagtctgaatctcaaggtgaatctgaaggtgaaggc
gatgacgatgatgacgaagaagaagaagattgcaaaagccacacgaaagatgaggaagag
ggagacgacaaagacgaagaagacaaccaggaggacattgataacttctacgaagcacaa
gaaaccacctcgtctacaactacaaaatcattccaagacctccagctctcgcgaccaatc
ctcaaatgcttacaaacaatgggattcacccagccaacacccgtacaagcatcgactatc
cccatcgccttgctaggtaaggacatcgtggcaggggctcaaacaggtagtggtaaaacc
gcagcatacttgatccccataatcgagcgtctacttttcaaaaactccacctcgacaaaa
gccatcatcttggcacccacgagagaattggccatccaggtgtttgacgtgggtaggaaa
ttaggccagtatgttcaaaatctcaatttcggtatggcggtcggtgggttgagtcttaaa
caacaggaacagcagttgaaaacacggcccgatatcgtcattgccacaccaggtagatta
atcgaccatatcagaaacagtcccagcttcagtgtcgaagatgtacaagtcttggtgatt
gatgaagccgacaggatgctcgaggaagggttccaagaagaactcaccgaaatccttcaa
ctaatccccaaatacaagcgtcaaactttgctattttccgccactatgaacaccaagatc
caagacctcgtgcagttgtccttaaacaaaccagtcaaggtgatgattgacccaccaaag
acggtagcgtcgaaattaaagcagcaatttgtccgaatccgtaaacgtgaagagctcaag
cctgccttattatacctccttctcaagaaactcgaaggacgagtagtggttttcgtgcgc
acaaaagtcgaagcccacaagcttcgtatcatcttggggttgttgggcctaacagtggcc
gagctccatggtgcactcacacaggagcagcgtctagccaacgtcaaggcattcaaacag
ctggtcaacgtgttgatatgtaccgatttggccgctagaggtttagatatcaagattgag
tacgtgataaactacgatatgcccaagacctacgagatctacttgcatcgtgtcggtaga
accgcgagagccggccgtaaaggtacatcgattacatttgtcggtgaaagcaaccaagag
cgaagtatagtgaaactggcgatcaccaatggccagtccgtggcgcggaaagttgattgg
aatgaagttgaagcggtgaatgacaagatcaagaacagcgaaggagcaattgacgaagtg
ttgcaagaggagaaacaagctcgcgagattatgcacgcggagatgcaattgaacaaggcg
gaaaacttgatgaaatacgaaaaggacatcaaggctcgaccaaagagaacctggttcaag
agtgaagtcatggaacagttgacgaaacatggtaaaaaggttaattcaaagaaaagaaag
gttaatgaagagagaaaggagaacaagggggagagatcgtataaaaagactaaagctgat
cgaactgctaaagcgtccaacaagaaatcgctgaaaaagaagagatag
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