Lodderomyces beijingensis: 92207422
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Entry
92207422 CDS
T10315
Symbol
LODBEIA_P22260
Name
(RefSeq) uncharacterized protein
KO
K14328
regulator of nonsense transcripts 3
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03013
Nucleocytoplasmic transport
lbg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
92207422 (LODBEIA_P22260)
03015 mRNA surveillance pathway
92207422 (LODBEIA_P22260)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbg03019
]
92207422 (LODBEIA_P22260)
Messenger RNA biogenesis [BR:
lbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
92207422 (LODBEIA_P22260)
mRNA cycle factors
P-body specific factors
92207422 (LODBEIA_P22260)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
92207422
NCBI-ProteinID:
XP_066829164
UniProt:
A0ABP0ZKU4
LinkDB
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Position
3:complement(250116..251288)
Genome browser
AA seq
390 aa
AA seq
DB search
MASVTPSRNPPLKPPQSRGSSSRRAPLASGAGKPGSNKTSLLDAGSRSNKLTIRLLPPSL
GEREFLAQLAQIYPYHATKIMQFYYVQGSYPSKPFEVPVYSRAYVAFKNVTDMEAFANFV
KGKSFADDRDSTVPMVERSLFHKMVDLRSQSFSEDAGDKGKNDPKWSLSEDEIFKKFLSF
LNNETPEFNLVKAKKQVRKRKEKAPAAEAKNKKAKGNEPKAKEAKKEENETNGKKKEKKE
KKEKENAKGNKSGKRRSRKPHEPTKPSEGEPGSETKEATANKKKRPKKEAKQSGKTETTD
ADISNNNNNNNASTEKSTPTKRTRTKKRPPKKNKPAGSSEGNSKPPAPSEGPVPIESQRP
KQAPAAPIKPIKILTSKNDKSTNTNTADTG
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagtgacaccgagcagaaacccacctttgaaaccgccgcaatcgcgcggctcg
tcttcgcggagagccccgcttgcctccggtgcaggcaagcccggaagcaacaagacgagc
ttgttggatgctggatctcgaagcaacaaactcaccatcagattgttgcctccgtcgctt
ggagaacgcgaatttttagcccagttggctcaaatctacccttaccatgctaccaagatc
atgcaattctattatgtccaaggctcgtatccgctgaagccttttgaagtgcccgtgtac
agcagagcttatgttgcgttcaaaaacgtcaccgatatggaggcgtttgccaattttgtc
aagggcaagtcgtttgctgatgacagagattctacagttcccatggtggaaaggtctctt
ttccacaagatggtggacttgagaagccagctgtttctggaagacgccggagacaagggc
aagaacgatcccaagtggagtttgagtgaggatgagattttcaaaaagtttttgagcttt
ttgaataatgagactcctgagtttaaccttgtcaaggcgaagaagcaagtgcgaaaacgc
aaggagaaagctcccgctgctgaggcaaagaacaagaaggcaaaaggtaatgaacctaaa
gctaaagaagcaaagaaggaagaaaatgaaacgaatggaaagaagaaggagaagaaggag
aagaaggagaaggagaacgccaagggcaacaagagcggtaaacgccgctcaagaaagccc
catgaaccaaccaagccctccgaaggagaaccgggatcagaaaccaaagaggcaaccgcc
aacaaaaagaaaagaccaaagaaggaagccaaacagagtggtaaaaccgaaacaactgat
gcagatatcagtaataataataataataataatgctagtacggagaaatctacccctacg
aagcgcacacgaacaaagaagcggcctccaaagaagaacaaaccagctggttcatccgag
ggcaacagcaagccccccgcgccgagtgaggggccggtgccaatcgagtcgcaaagaccc
aagcaagcacccgcggcaccaatcaagcccatcaagatattaacgtccaagaacgacaaa
agcacaaacacaaacacagcagacactggataa
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