Lodderomyces beijingensis: 92207468 Help Entry 92207468          CDS       T10315                                  Symbol LODBEIA_P22720 Name (RefSeq) uncharacterized protein   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism lbg  Lodderomyces beijingensis Pathway lbg03030   DNA replication lbg03410   Base excision repair lbg03420   Nucleotide excision repair lbg03430   Mismatch repair Brite KEGG Orthology (KO) [BR:lbg00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     92207468 (LODBEIA_P22720)    03410 Base excision repair     92207468 (LODBEIA_P22720)    03420 Nucleotide excision repair     92207468 (LODBEIA_P22720)    03430 Mismatch repair     92207468 (LODBEIA_P22720)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:lbg03032]     92207468 (LODBEIA_P22720)    03400 DNA repair and recombination proteins [BR:lbg03400]     92207468 (LODBEIA_P22720) Enzymes [BR:lbg01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      92207468 (LODBEIA_P22720)     6.5.1.6  DNA ligase (ATP or NAD+)      92207468 (LODBEIA_P22720)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      92207468 (LODBEIA_P22720) DNA replication proteins [BR:lbg03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     92207468 (LODBEIA_P22720)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      92207468 (LODBEIA_P22720) DNA repair and recombination proteins [BR:lbg03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      92207468 (LODBEIA_P22720)    NER (nucleotide excision repair)     Other NER factors      92207468 (LODBEIA_P22720)    MMR (mismatch excision repair)     Other MMR factors      92207468 (LODBEIA_P22720) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase TrmB Motif Other DBs NCBI-GeneID:  92207468 NCBI-ProteinID:  XP_066829210 LinkDB All DBs Position 3:395509..397788 Genome browser AA seq 759 aa AA seqDB search MAQQQTLGRFFAGSAAAATSAKSKQASESPTKTQTKRAEVDSSSSTTNTIPSPAVKRQKL ETNEEEEENEEIMSAPAEEETITSDSSQEGVAAETEAGATQASETEAASLINLSEEQQKK SNPNDKSLSSSKIPYSSLTDIFEQLEHESSRLKITAIISQYFLTILQQQHDESKLIKIVY LFINRLGPDYEPDLELGLGETLLIKTISECYGRPTTKIKEDYKKVGDLGLVAQKSRSGQP TMFKPASLDVDTVFENLTKIAKFTGKDSQSKKIGLINKMLTACELKHNEAKFLVRSLEGK LRIGLAEKTVLVGLAQAFVNYENWKAAESAEGGEAKKSNKVDPVAKLAEAEDIIREAFTR IPNYQIIIENAYKYGIFNLLDHCHLTPGIPLKPMLAKPTKSMSEVLDRFQDEKFTCEYKY DGERAQVHLSPDGGVRIYSRNSEDMSQRYPDLISIIKEFSKTQEHTSMILDCEAVAWDRV NNKILPFQVLSTRKRKDVNEKDITVHICLFAFDILFYNNESLITHSLQERRNLMFRHLKP LEGKFQFATFKDATSLEVLQQFLDQSIKDSCEGLMVKMLEGTESFYEPSKRSRNWLKLKK DYLAGVGDSLDLVVIGAYNGRGKRTGTYGGFLLATYNQDTGDLETTCKIGTGFSDEDLTN LYNKLHPTEIPHAKEYFVYDKTNSNAVPDVWFDPSLLFEVLTADLSLSPIYKAAHAEYGK GISLRFPRFIRQRDDKSIEDATSSSEVSEFYQRQPHLQS NT seq 2280 nt NT seq  +upstreamnt  +downstreamnt atggcacagcaacaaacattgggaagattctttgcaggctcagcagcagcagcgacactg gccaaaagcaaacaggcatcggaatcccccacgaagacacaaactaagagagccgaagtt gacagcagtagcagcaccaccaataccatcccatcgccagcggtgaaaaggcaaaagttg gagacaaacgaggaggaggaggaaaatgaggagataatgctggctccagcagaggaagag accataacgtcggattcaagccaagagggagttgcagctgaaactgaagctggagctaca caagcatctgagaccgaagccgcatcccttataaacttgagcgaggaacagcaaaagaaa tcgaaccccaatgacaagtcattgtcgtcatccaagatcccttactcttcgttgaccgac atattcgagcaattggagcacgagtcgtcgcgattgaaaatcacggcaatcatctcgcaa tacttcttgaccatcttgcaacagcaacacgacgagtccaagttgatcaaaatcgtctac cttttcataaatcgattgggacctgattacgaacccgatttggaactaggtcttggagag accttgttgatcaaaaccatcagcgaatgttacggaagacccacaacgaaaatcaaagag gactacaagaaagtgggcgacttgggtttggtggcacaaaagtcgcgatcgggccagccg acgatgttcaagccagctagcttggacgtggacactgtgtttgaaaacttgacaaagatt gccaaattcacgggcaaggactcgcagctgaagaaaatcggattgatcaacaagatgttg actgcttgtgagttgaaacacaacgaagccaagttcctcgtgcgttcgttagagggcaag ttgcggatcgggttagctgaaaagactgtccttgtcgggttggcacaggcatttgtgaat tacgaaaactggaaagccgccgaaagtgctgaaggtggggaagcgaaaaagagtaacaaa gtagacccggtggccaagttagccgaggcagaggatattatccgagaggcgttcacgagg attcccaattaccaaatcatcattgaaaatgcctacaagtacggaatctttaatcttcta gaccattgccatttgactcctggaattcccttgaagcccatgttggccaagcctaccaag tcaatgagcgaggtgttggacagattccaagatgaaaaattcacctgcgaatacaaatat gatggtgaaagggcacaagtgcatctttctcccgatggcggggtgcggatatactcgaga aactccgaagacatgtcgcagaggtacccggacttgatctcgatcatcaaagaatttagc aagacgcaagagcacacctcgatgatattggactgcgaggcagttgcatgggacagagtc aacaacaagatcttgccatttcaagtgttgtcaaccagaaagaggaaagacgtgaatgaa aaggacatcacagtccacatttgtcttttcgcgtttgatattttgttctacaataatgag tcattgatcacacactcgctacaagaaaggaggaacttgatgtttcgccacttgaagccg ttggaggggaaatttcaatttgctactttcaaagatgcaacttctttggaagtattgcag cagtttttggaccaaagcatcaaggactcgtgcgaggggttgatggtcaagatgctagaa ggtactgagtcattctacgagccgtcgaaaagatctagaaactggttaaagttgaagaag gactatttggcaggcgtgggtgattcgttggatcttgtagtgattggcgcatataacggc agaggcaagagaacaggaacctatggcggattcctcttggcaacgtacaatcaggacacg ggagatttagagacaacgtgcaaaatcggcactggtttcagcgacgaggacttgacaaac ttgtacaacaagttgcatcccacagaaataccgcacgccaaagagtactttgtctacgac aagacgaactccaatgccgttccagacgtttggtttgaccctagcttgttgtttgaagtg ttgacggccgatttatcgcttagtccaatctacaaagcggcacacgcagagtatggcaaa ggtatatcgttgagattcccgcgttttattcgccaacgagacgacaagagcatagaggat gcaacgagctcgtccgaggtgagtgaattctaccagcgccaaccgcacttgcaactgtaa

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