KEGG   Lodderomyces beijingensis: 92207677
Entry
92207677          CDS       T10315                                 
Symbol
LODBEIA_P24810
Name
(RefSeq) uncharacterized protein
  KO
K10752  histone-binding protein RBBP4
Organism
lbg  Lodderomyces beijingensis
Pathway
lbg03082  ATP-dependent chromatin remodeling
lbg03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:lbg00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    92207677 (LODBEIA_P24810)
   03083 Polycomb repressive complex
    92207677 (LODBEIA_P24810)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lbg03036]
    92207677 (LODBEIA_P24810)
Chromosome and associated proteins [BR:lbg03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     92207677 (LODBEIA_P24810)
  Histone modification proteins
   HAT complexes
    HATB complex
     92207677 (LODBEIA_P24810)
   HDAC complexes
    Sin3A-HDAC complex
     92207677 (LODBEIA_P24810)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     92207677 (LODBEIA_P24810)
    PRC2.2
     92207677 (LODBEIA_P24810)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     92207677 (LODBEIA_P24810)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    92207677 (LODBEIA_P24810)
  Chromatin remodeling factors
   NuRD complex
    92207677 (LODBEIA_P24810)
   NuRF complex
    92207677 (LODBEIA_P24810)
   NuRF complex (fruit fly)
    92207677 (LODBEIA_P24810)
SSDB
Motif
Pfam: WD40_CDC20-Fz CAF1C_H4-bd WD40_Prp19 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_EML_2 WDR55 WD40 WD40_WDHD1_1st WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR11_1st Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_DCAF12 MIOS_WD40 SSP160
Other DBs
NCBI-GeneID: 92207677
NCBI-ProteinID: XP_066829419
LinkDB
Position
3:927873..929240
AA seq 455 aa
MTDMEHSIEIDSGDEEAITTTTTTTTTTTNENSAIDEPTERKYRIWKKNAPFLYDYLSTN
SLLWPSLTVQFFPDVTHHVAANTDAGKSAKIGDSDVISQRLLHGTFTMGQSVVDSISFLQ
VPTFKNLSKFILMDKLDYHHAKEEFELNLPRSAPSLSVKVLQKINQVGDVNKVRYMPQKP
NVIASANNYGDLVIFERTKHKSFQKTLIDDTEVNKVQLRLSNATQPKSEIFAMDWNRNKE
GLLLSGDEAGVVNLYDITRYRKSEESLNQDKSWTNKSGINDLEWFPTHDSLFAFGDESGN
LKIQDTRMQPSSPATLEKQLCLCINSISLNPNFATALATGDSKGGVSIWDIRNLSQSVAD
MKEAHSDSITQLKWHPKYGQIIASSSTDHSVGIHDLSNIEKNVSPTIFQHLGHMLGVNDF
DWSFADDWMIASVADDNSLHIWKPSHHVTSVVHTW
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgaccgacatggaacattctatagagattgactctggagatgaagaagccatcacgacg
acaacgacgactacaacaacaacgacaaatgaaaactccgcgatagatgagcccacggaa
agaaaatacagaatatggaaaaagaacgcgccgtttttatacgattacttgtctacaaac
tcgctactctggccgtcgctaacagttcagttcttccccgatgtaactcaccatgtggcc
gcaaacacagatgccgggaagctggcgaaaattggcgactccgacgtcatcctgcaacgg
ctcttgcatggcactttcaccatgggacaatctgtggttgactcgatatcgttcttgcaa
gtgccaacattcaaaaacttgagcaaattcatcttgatggataaactagattaccaccat
gcaaaggaagaattcgagttgaatcttccgcgttctgcgcctagcctttctgttaaagtg
ttgcaaaagattaaccaagttggagatgtcaataaagtacggtatatgcctcaaaaaccc
aatgtcattgcgagtgccaacaactatggagatttggtgattttcgaaaggacaaagcac
aagagtttccaaaagacgcttatcgacgatactgaggtgaataaagtgcaattgcgcttg
agtaatgctacgcaaccgaaaagcgagatttttgcaatggattggaataggaataaggaa
gggttgcttctttcgggagatgaggcgggggtggtcaacttgtatgatataacgcggtac
aggaaactggaggaatcgcttaatcaggacaaatcatggaccaacaagagcgggataaac
gacctcgagtggtttcctacccatgactcgttatttgcatttggagacgaaagcggcaac
ttaaagatccaggacacgagaatgcagcctagctcaccggcgacattagagaaacaactt
tgcttatgcatcaactcaatctcgttaaatcccaattttgccacggcgttggctactggc
gattcgaaaggtggagtgagtatatgggatattcgaaatctaagccaatccgtggccgat
atgaaagaagcccatctggactcaatcacccagttaaagtggcaccctaaatacggccag
attatcgcatcctcgtcaactgatcacctggtgggcatccatgacctatcgaatatcgaa
aagaatgtttcgccaactatatttcagcatttgggccacatgttgggagtcaatgatttc
gactggtcgtttgctgacgactggatgatagctagtgtggcagacgataactcgctacat
atttggaagccgtcgcatcatgtcacaagcgttgttcatacctggtga

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