Lodderomyces beijingensis: 92208176
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Entry
92208176 CDS
T10315
Symbol
LODBEIA_P29800
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03020
RNA polymerase
lbg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
92208176 (LODBEIA_P29800)
09124 Replication and repair
03420 Nucleotide excision repair
92208176 (LODBEIA_P29800)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbg03021
]
92208176 (LODBEIA_P29800)
03400 DNA repair and recombination proteins [BR:
lbg03400
]
92208176 (LODBEIA_P29800)
Enzymes [BR:
lbg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
92208176 (LODBEIA_P29800)
Transcription machinery [BR:
lbg03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
92208176 (LODBEIA_P29800)
DNA repair and recombination proteins [BR:
lbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
92208176 (LODBEIA_P29800)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_3
MRNIP
Motif
Other DBs
NCBI-GeneID:
92208176
NCBI-ProteinID:
XP_066829918
LinkDB
All DBs
Position
3:2069525..2073256
Genome browser
AA seq
1243 aa
AA seq
DB search
MSQDQSMADPYMYDEDDSQKITPEDCWTVISSFFQEKGLVSQQLESFNEFIESTIQELVW
EDAHLILDQPAQHTSEDDHFNKRYEIAFGKIYISKPSQTEGDGTTHPMFPQEARLRNLTY
SSPLYVDMTKKVFESDDNNRIDNELEWREVKPEKEQRDKDKEDDSKSHTYLGKVPIMLRS
QFCMLKDLGDHEMFELKECPYDMGGYFVINGSEKVLIAQERSAANIVQVFKKAAPSPISH
VAEIRSAIEKGSRLISSMQIKLYGREEKGTSARTIKATLPYIKEDIPIVIVFRALGVVPD
GDILEHICYEENDWQMLEMLKPCVEEGFVIQEREVALDFIGRRGVLGIRREKRIQYARDI
LQKELLPNITQEEGFETRKAFFLGYMVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLAN
LFRILFKKLTKDIYNYMQRCVENDKEFNLTLAVKSQTITDGLRYSLATGNWGEQKRAMSS
RAGVSQVLNRYTYSSTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGL
VKNLSLMTCISVGTPSDPIISFLRDWGLEPLEDYVPSNSPEATRVFVNGVWVGVHREPAS
LVDYMRDLRRNGDISPEVSIIRDIREKEFKIFTDAGRVFRPLFIVDDKPDSETKGDLKLT
KEHVNQLLETSYEGYDEEEEGPGYKWSSLVREGIVEYVDAEEEETIMIAMTPEDLEASKS
SLSETQQQELQMEDQEIDPAKRIKPTSSSNTHTFTHCEIHPSMILGVAASIIPFPDHNQS
PRNTYQSAMGKQAMGVFLTNYSVRMDTMANILYYPQKPLATTRAMEHLKFRELPAGQNAI
VAIACYSGYNQEDSMIMNQSSIDRGLFRSLFFRSYMDLEKRQGMKALETFEKPSRSDTLR
LKHGTYEKLDDDGLIAPGIRVSGEDIIIGKTTPIPPDTEELGQRTQYHTKRDASTPLRST
ESGIVDQVLLTTNGDGAKFVKVRMRTTKVPQIGDKFASRHGQKGTIGVTYRHEDMPFTSQ
GIVPDLIINPHAIPSRMTVAHLIECLLSKVSSLSGLEGDASPFTDVTAEAISKLLRTHGY
QSRGFEVMFNGHTGKKLMAQVFFGPTYYQRLRHMVDDKIHARARGPVQVLTRQPVEGRSR
DGGLRFGEMERDCMIAHGAAGFLKERLMEASDAFRVHVCGVCGLMSVIANLKKNQFECRS
CKNKTNIYQIHIPYAAKLLFQELMAMNITPRLYTESSGVSVRT
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagatcaaagcatggcggatccatacatgtacgatgaagacgactcgcagaaa
atcacaccagaggattgctggacagttatatcgtcatttttccaagaaaaagggttggtg
tcgcaacagttggaatcattcaatgaattcatcgagtccacgatccaggagttggtctgg
gaggatgcgcatttgatcctagatcaacctgcacagcacacgtccgaagatgaccatttc
aacaagagatacgaaattgcatttggcaagatttacatctcgaaaccgagccagacggaa
ggagacggtaccacacaccccatgttcccgcaggaggcaaggcttcgtaatctcacatac
tcgtcgcccttatatgtcgacatgacaaagaaagtgtttgaatcggacgacaacaaccga
atagacaatgagctagagtggcgcgaagtgaagccggaaaaggagcagagggacaaggac
aaggaggacgactccaaatcccacacctatctcggtaaagtgcccattatgttgagatcg
cagttttgtatgttgaaagacttgggtgaccacgagatgtttgagttgaaagagtgtccc
tatgacatgggtggatactttgtcattaacgggtcagaaaaagtgttgattgcacaagag
agaagtgctgcaaatatcgtacaagtgtttaagaaagcagcaccttcacccatttcgcat
gtggcggagattagatccgccatcgaaaagggttcaagattgatttcgtctatgcagata
aagttgtatgggcgtgaagaaaagggaacctcggcaagaacaatcaaagcaactttgcca
tatatcaaggaggatattccaattgttattgtctttcgagcattgggagttgttcccgat
ggtgatattttggagcatatttgttacgaagaaaatgattggcaaatgttggagatgttg
aaaccgtgtgtcgaagaaggtttcgttatccaggaacgtgaagttgcgttggatttcatt
ggaagacgaggggtcttgggtatcagaagagagaagcgtattcagtacgcgagagatatc
ttgcaaaaggagttactacccaacattactcaggaggaaggttttgaaaccagaaaggct
tttttcctcgggtacatggtcaatagattattactttgtgcgttggagagaaaggaacca
gacgatagagaccactttggtaaaaaaagattagatttggctggtccgttgttggcaaac
ttgttccgaatcttgtttaaaaaattgaccaaggacatttacaactatatgcaaagatgt
gttgaaaacgacaaggagttcaatcttacattggcggtaaagtcgcagaccatcaccgat
gggttgagatactctcttgcgactggtaactggggtgagcaaaagagagctatgagctct
agagccggtgtttctcaagtgttgaaccggtatacttattcttcaacattgtcgcatttg
agacgaacaaacacccctattggtagagatggtaagattgccaagcctagacagttgcat
aatacccactggggattggtttgtcccgcagagactcccgagggtcaggcatgtgggttg
gtgaagaatttatccttgatgacgtgcatttctgtcggtacaccttcggatcccatcatt
tcattcttgcgcgattggggtctagagcccttggaggactatgtgccttccaactcgccc
gaggcaaccagggtgtttgtcaatggtgtctgggttggtgtgcatagagagcctgcttct
ttggttgattacatgcgtgatcttcgaagaaatggcgacatctcgcccgaggtttcgatc
atccgagacattagagaaaaggagtttaaaatctttacggatgcaggaagagtctttaga
ccattgtttatcgttgacgacaaaccggattcagaaaccaagggtgacttgaaactcaca
aaggagcatgttaaccaattattggaaacttcatacgaaggttatgacgaggaagaagaa
ggccctggttacaaatggtcctcgttggttagagaaggaattgtggaatacgttgatgcc
gaggaagaggaaacaattatgattgcaatgacacctgaagatttggaagcgtccaagagt
agcttaagtgagactcaacagcaggaattgcaaatggaggatcaggaaattgaccccgcc
aaaagaatcaagcccaccagcagtagcaacacgcacacttttactcattgcgagatccat
ccttcaatgattcttggagtggcagcctccattatcccattcccagaccacaaccaatct
ccacgtaacacttatcaatctgcaatgggtaagcaagccatgggagtgtttttgaccaac
tattcagtgcgaatggacaccatggcgaacatcttgtactacccgcagaaacctcttgcc
acgacgagagcgatggagcatttgaaattccgtgaacttccagctggccaaaatgcaatt
gttgccattgcctgttattctggttataatcaggaagattctatgattatgaaccaatct
tctattgatagaggtttgttcagatccttattctttagatcctacatggacttggaaaag
aggcaaggaatgaaggctttggaaacgtttgaaaagccatcgaggtcagacactttgaga
ttgaagcacggaacatacgagaaattggacgacgacgggttgattgcgcccggtatcagg
gtgagtggagaagacatcatcattggtaaaacgactcctatccccccagataccgaggaa
ttggggcagagaacacaataccataccaagagggacgcttcgacgccgttgagaagtaca
gagtcgggaattgttgatcaagttttgttgaccaccaacggtgatggagccaaatttgtt
aaagtcaggatgagaactacaaaagtgccccagattggagacaagtttgcttctagacac
ggtcagaaaggtaccattggtgtcacctataggcatgaggacatgccattcacgtcacaa
ggtattgtgcccgacttgattattaatccgcatgctattccatcgcgtatgacagtggcg
catttgatcgagtgtctattatccaaagtttcttccttgtcgggactcgaaggtgacgcg
tcccccttcaccgatgttacagccgaggcaatttcgaaattattgagaacccacggatac
caatcgagagggtttgaggtgatgttcaatggtcacaccggtaagaaattgatggcacaa
gtgtttttcggccccacatactaccaaagattgaggcacatggtggacgacaagatccac
gcaagagcaagaggaccggtgcaagtgttgaccaggcaaccagtcgaaggtagatcaaga
gatggaggtttgcgtttcggagagatggagcgtgattgcatgattgctcacggtgccgct
ggtttccttaaagagagattgatggaggcatcggatgcctttagagtgcacgtttgtggg
gtgtgtggattaatgtctgtcattgccaacttgaagaagaaccagttcgagtgccggtct
tgtaaaaacaagacaaacatttatcaaatccacataccttacgcagccaaacttttgttc
caagagttgatggccatgaatatcaccccaagattgtacacggaaagctccggagtgagt
gtccgtacctga
DBGET
integrated database retrieval system
