Lodderomyces beijingensis: 92208392
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Entry
92208392 CDS
T10315
Symbol
LODBEIA_P31960
Name
(RefSeq) uncharacterized protein
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
lbg Lodderomyces beijingensis
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lbg03012
]
92208392 (LODBEIA_P31960)
Enzymes [BR:
lbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
92208392 (LODBEIA_P31960)
Translation factors [BR:
lbg03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
92208392 (LODBEIA_P31960)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSRM_DHX29
Helicase_C
DEAD
ResIII
RWD
OB_NTP_bind
UBA_DHX29
HA2_C
AAA_22
AAA_19
AAA_29
ATPase
HA2_N
nSTAND3
PhoH
UBA_7
T2SSE
NPHP3_N
AAA_7
UBA
Cas3-like_C_2
AAA_16
DND1_DSRM
ABC_tran
Motif
Other DBs
NCBI-GeneID:
92208392
NCBI-ProteinID:
XP_066830134
LinkDB
All DBs
Position
4:272461..276414
Genome browser
AA seq
1317 aa
AA seq
DB search
MAKKEKVKNEVKDSKSKTKTVEPSETADPKKPTRGLAIGENFGWTGKLPVTLLNEHCQKQ
KWNKCDYSMMKRAGGLLCVITLSWENPKTKEVINVKFVPSYKPRPTTNEARHMAATFVLH
RINFIKNMKMLLPVIFRDYWTELESERLVSLKENKKLHDIKYNVNPFLVHLEQQESKRKQ
EKEREDRINQESKIQRKAVSLGQRNAVAEKKTLSSLHSIPKKVWESAPLLDIPAEIRADI
ELSVREYLTWDKKTDDVAPNVEEIKKLVALGFRESHAQEAFQYTWTFTGALEWLIFHLPE
DDLPSSFSKSEKESEVSLRVAKPLKTELAMKRLRHSGFSNDVILKIYEDNDEDYFQTSIE
LTKLLGSGGEASPVEDSQELWDQELEAISMSKTDVTIEDTNVVTIGLDVDGIAENKVSVR
LFKSQNYPNEVPGIQLVVSENYKIANYVKLSILKSLISELTVSECMIYSIIEWLELHMMS
KIEDPGSLCMYEQNEEQISRNFSQVEQSRKQRQQNVELIKKSYVDRSDALKKLQKQREAL
PAWKKQESIVSLIAASQITLITGETGSGKSTQVVQFILDHLNKEGDFSTTILCTQPRRIS
AMGLASRISETRGDKVGQETGYMIRGESKVNSQTRITFLTTGILLRMLQQSFKNKDDSDK
IFAKVGYIFIDEVHERSVDSDFLLIILRDVLKKFKKLKIVLMSATIEREKFDKFFGTTIN
NAHIEGRTFPIEDFYLDDILQSLDYKMEVGGELIKPRSDSAFFKKGTINYDLLVKLVTKA
DRDLTLSENNGSILVFLPGVGEINRAMREVSAVLPNAIVLPLHSSLSPRDQNSVFKSYPG
KKRKIVLATNIAETSITISDCVVVIDTGRSKTMFFDADLNTTKLVEEWCSQAEIKQRRGR
SGRVTSGTCYHLYTKETAQSMLKQPIPEIKRVRLENLYLIVKSMGVENVENFLASGLDSP
DASAMVSAKKLLEDVGALSEDRLTNLGRYLSFLPMDPHTGKLLILGCIFGCLDFCVTLAA
INAVGSIFANTMENRSQIKSVLTKYSEASGDLVGEANVFLAYRNNPSKSFMREHCLSFTA
VNDVQSTIIQFHQLLDEMGFVGNKEPKPKLNQTLVRAIVTGSFYPNIVRVQYPNQKYFKS
ASGSIAVDPDAKEIKLWIKNENESQEQHNFPSTRVFLHPSSSLFLSKTAYEDDGGEANGG
NSAMAYTELTPYVPKSESAFKSAFLTYKSSHMTSKLYIRGVTPADSVATLLFGGNFEYDA
GGVVLDGWIPIRTWCKNGVLIKQVRKLLDKYIDEKLSSVESTTHGTILNVIEKVINI
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaaggaaaaagtaaagaatgaagtcaaggatagcaagtcaaagacaaaaacg
gtagagccaagtgaaacggcagatccaaagaagccaactcgagggttggcaattggggaa
aactttggctggactggtaaacttcccgtgactttgctcaatgagcactgccaaaagcag
aaatggaacaagtgcgattacagcatgatgaagcgagcaggaggacttctctgtgtgatt
acattgtcttgggagaaccccaaaaccaaagaggtcataaatgttaaatttgtgccgagt
tacaagccgaggcccaccacgaacgaggcaaggcacatggctgctacttttgtccttcat
cgaatcaactttatcaaaaacatgaaaatgttgttgcccgtgatatttcgcgactactgg
acagagttggaaagcgaaaggcttgtgctgctaaaggaaaacaagaaattgcacgatatc
aagtacaatgtgaacccgtttttggtccatctcgagcaacaggaaagcaaaaggaagcaa
gaaaaagagcgagaggacaggatcaaccaagaatcgaaaattcaaaggaaagccgttagt
ttgggacaaagaaacgctgttgccgagaagaaaaccctttcttctttgcactcgatcccc
aaaaaagtgtgggaatcagctcctttgttggatatacctgccgagataagagcagatatt
gaactctctgtgcgagaatatttgacttgggataaaaaaactgatgacgttgccccaaat
gtagaggagattaagaaattagttgcattgggatttagggaaagccatgcccaggaggca
tttcagtacacgtggacatttacaggagccctcgagtggttgatattccacttgccggaa
gatgaccttccttcgtcattttccaaaagcgaaaaggagtcagaggtcagcttgagagtt
gcaaagcctttgaaaacggaattggcaatgaagagactaaggcactcgggtttttcaaac
gacgtgattctcaaaatctacgaggataacgatgaggattactttcaaaccagcatagag
ctcaccaagttattgggctctgggggcgaagcatctcccgtagaagatagccaggaacta
tgggatcaagagctcgaggctataagcatgtccaaaacggacgtcacgattgaggacacc
aatgttgtcaccataggattggatgtcgacggaatagccgagaacaaagttagcgtacgt
ttattcaagtcccaaaactatccaaacgaagtgccaggcattcaattggtggtgagcgaa
aattacaagattgccaattatgttaaattgtcgattttgaaaagcctcatttccgaattg
actgttagcgaatgcatgatttactctatcatcgagtggctagaacttcacatgatgagc
aagatagaggaccctgggtccttgtgtatgtatgagcaaaacgaggagcagatttcgagg
aattttctgcaagttgagcagtctagaaaacagcggcagcagaatgtcgagttgattaaa
aaactgtatgtggatcggtcggacgcgttgaagaagttgcaaaaacagagagaggcattg
cctgcatggaaaaagcaggagtcgatagtgagtttgattgctgcaagtcaaatcacgtta
atcaccggtgaaaccggttccggtaagtccacccaagtggttcagtttatcttggaccac
ctaaacaaggaaggcgacttctccaccaccatattgtgcacgcagccgcgtcgtatttcg
gcaatgggtcttgccagcagaatctccgagacaagaggcgacaaagtcggacaagaaaca
ggatacatgattcgaggagagagcaaagtcaactcccaaaccagaatcacgtttttgacc
acggggatccttcttcggatgctccagcagtcttttaagaacaaagacgactcggacaag
atatttgcaaaagttggttacatatttattgacgaagtccacgaaagatcggtggatagc
gatttcctccttatcatcttgagggacgtgttgaagaaatttaaaaagttgaaaatagtg
ttgatgtcagcaacgattgaaagagaaaaatttgacaagttctttggcactacaatcaac
aatgcccacattgaggggagaacattccccatcgaggatttctacttggatgatattttg
caatccttggattacaagatggaagttggaggagagctcatcaaaccgcgctccgactcg
gctttctttaaaaagggaaccatcaattacgacttgcttgtcaagctcgtaacgaaagcg
gacagggatctaacattgagcgagaataatggctcgattctagtgtttttgccaggtgtg
ggtgaaatcaaccgcgctatgagggaagtcagcgcagtgcttccaaatgcaatagtgttg
cctcttcattcttcattgtcgccgcgggaccaaaacagcgtctttaaatcataccctgga
aaaaaacggaaaattgttttggcaacaaacattgctgaaacttcgattacgatttccgac
tgtgtcgtggtgattgataccggtagatcgaaaaccatgttttttgatgcggatctcaac
acaacaaaactagtcgaagaatggtgctcccaggccgagataaagcagcgtcgcgggcgt
tcgggccgtgtaactagcggaacctgctaccatttgtacaccaaagagacggctcagagt
atgctcaaacagcccatccccgagatcaagagggtcaggcttgagaatttgtatcttatt
gtcaaatccatgggcgtggaaaatgttgaaaattttttggcaagtgggttggattctcca
gacgcttcggcaatggtgtctgcgaagaagcttttagaagatgttggagctctcagtgag
gaccggttgacgaatctcggtcggtacttgtcatttttgcccatggatccgcatacgggg
aagcttttaattttgggctgtatatttggatgccttgacttttgcgtcactttggcagca
atcaatgccgtgggtagtatctttgccaacacgatggagaacagactgcaaatcaagctg
gtcttgaccaaatattccgaggccagtggcgatcttgttggagaagcgaatgttttcttg
gcttaccgcaacaacccgagtaagctgtttatgagagagcattgcttgtccttcacggct
gtaaatgatgtccaatcgactattatccagtttcatcaactactcgatgaaatgggcttt
gtcgggaacaaggaaccgaaaccgaaacttaaccaaactttggttcgtgcgattgtcacg
ggatctttttacccaaacatcgtcagggtccagtatccgaaccaaaaatatttcaaatca
gcgctgggttccattgccgtggatccagatgccaaagaaatcaagttgtggatcaaaaat
gaaaatgagagccaagagcagcataattttccttcaaccagggtgtttcttcatccttcc
tcatccttgtttctcagcaagaccgcttatgaggacgatggaggagaagctaatggtggt
aatagtgctatggcgtacactgaactaaccccatatgtgccaaaatccgagtctgcattc
aagtcggcatttttgacctacaagtcgtcgcacatgacgtcaaagctctacattcgcggg
gtgacacctgccgattcagtggcaaccttgttatttggaggcaactttgaatacgatgcc
ggtggcgtggttctagacgggtggattccaatcagaacatggtgcaaaaacggagtcttg
ataaagcaagtccgcaaattgttggacaaatatatagacgagaagctctcaagcgtggag
agcactacgcatgggacgatcttgaacgttatagagaaagtcatcaatatatga
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integrated database retrieval system
