Lodderomyces beijingensis: 92208402
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Entry
92208402 CDS
T10315
Symbol
LODBEIA_P32060
Name
(RefSeq) uncharacterized protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92208402 (LODBEIA_P32060)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbg03041
]
92208402 (LODBEIA_P32060)
Enzymes [BR:
lbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
92208402 (LODBEIA_P32060)
Spliceosome [BR:
lbg03041
]
Complex A
U2 snRNP components
U2 related factors
92208402 (LODBEIA_P32060)
Complex B
92208402 (LODBEIA_P32060)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
AAA_22
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
92208402
NCBI-ProteinID:
XP_066830144
LinkDB
All DBs
Position
4:complement(293050..295788)
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AA seq
912 aa
AA seq
DB search
MSSGSQFGRVTNNPRDNDEKQRLRREKLAALREKKQQQEQKQKEQQQQQPEQKQENGNLA
GKSKTAEESLRLKDLEEKQRQRQQRLEEWKKSRSKKEEGSVAGDGKRQKAGIALAKKPLS
SKPKVALSKKRVSDFDVETEVVRKKAPKLLQQSNLGEAANNVLHKEPSNHDELDDYMNSI
FRANDVDGTDNNDATVQVADKRPGADGDSHPEPNNDNNDPDYNNEDNYDDDDEEEEEEEE
DTDRLLMLKLTKLQNTGKQLQEVDHKSIDYQPFTKNFYQVPFDIKDMSHREIDMLRMELD
NVRVRGKETPAPFTRWSQLLLPNNIMSVVNERLEFKKPSPIQSQAIPVILSGRDLIGVAK
TGSGKTLAYVLPMMRHVQDQTSPNPGDGPIALILAPTRELALQIEQEVSKFATANSELRV
CCCYGGSSIETQISELKRGVHVVVATPGRLIDLLAANGGRVLTLRRTTFLVLDEADRMFD
MGFEPQIRKICSQIRPDRQTVLISATFPKKLEMLAKKVLENPVEVVVGGIGVVASGITQE
VVLCNDNRDEIRDKNKEAEPELDIRSVKLNTLKSILSRHELNGNNKLLIFVEKQIDADTL
VLNLLKNKIPCVAIHGGKNQMDRAHAIKEFSDRESGVDILVATSIAARGLDVKNLSLVIN
FDPPGHLEDYVHRVGRTGRAGAMGRAITFVTKSQEKEISILVKALKMSSNPVDPSLQEIA
DRFAKKIESGEERKGFGFGGKGLDKLQKVRDNNMQMQRKMFGGAKEEVENKNSREATNEP
DEAISSMVLPTFEIFEGNSPETSGPDTCKFFCRITINDMPQKVRWSIVQGETLASIVDST
KTSITTRGQFYSPQSAEQPTSEKPKLYLLVEGLTRKSVENAIALIKDKMLQSVESMSLED
SNRSAATGRYKV
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaggatcacaatttggtagagttactaacaatccaagagacaatgacgaaaaa
caacgtctaaggagggaaaagttggctgccttgagagaaaagaagcagcagcaagaacaa
aagcagaaagagcaacagcaacagcaaccggagcaaaagcaggagaacggtaatctagct
ggcaaaagtaaaaccgccgaagagagtttgcgattgaaggacttggaagaaaagcagaga
caacgccagcaaagacttgaagaatggaagaagagcagatcaaagaaggaggaaggttcc
gttgctggtgatggcaaaagacaaaaagctggaatagctcttgctaagaagccgctcctg
agtaaaccaaaagttgccttgagcaagaaaagagtgtcggattttgatgttgaaacagag
gttgtaagaaagaaagcacccaaacttttgcagcagctgaatcttggcgaagcagcaaac
aatgtcttgcacaaggaaccatcaaaccatgacgagcttgacgactacatgaattcaata
tttagggcaaatgatgtagatggaacggataacaacgacgctaccgtacaagttgccgac
aaaagaccaggtgctgatggcgatagccatccggaaccgaacaacgataacaatgatccc
gattataacaacgaggataactacgacgatgatgatgaggaggaggaggaggaggaggaa
gacacagatcgacttttaatgttgaaattgacaaagttgcaaaatactggtaaacaacta
caagaagtggaccataaactgatagactaccaaccatttaccaagaatttttatcaagtt
ccgtttgacatcaaagatatgagtcacagagagattgacatgctacgaatggaattggac
aatgttcgtgttagaggcaaggaaacgcctgcgccgtttactcgttggtcccagttactc
ttgcccaacaacatcatgtcagttgtcaatgagcgactagaattcaaaaagccgtctcca
attcagagtcaagccattcccgttatactctctggacgagatttaatcggtgttgccaag
acaggatcgggcaagacattggcctatgtgcttcccatgatgcgtcacgtacaagatcaa
actctgccgaaccctggagatggtccaattgccttaatattggctccaaccagagaacta
gcgttgcaaattgaacaggaagtgctgaagtttgctacggcaaacctggagttgagagtt
tgttgttgttatggtggctcgagcatagaaactcaaattagcgaacttaagcgaggagtc
cacgttgtcgtggcaacaccgggcaggctaatagacttgttggctgccaatggaggacga
gtattgacattgcgccgaacaacttttttggtgttggatgaagccgaccggatgtttgat
atggggtttgagccccagattcgcaagatttgttcccaaattaggccggaccggcaaacg
gttttgatatcggctacttttccaaagaaactagagatgcttgcgaaaaaagtacttgag
aatcccgttgaagttgttgtgggtggaattggcgtcgttgccagtggaattactcaagaa
gttgtcctttgcaatgacaatagagatgaaattagagataaaaataaagaggcagagcca
gaattagacattcggagtgtcaaattaaacacgctcaaactgattttgtcccggcatgaa
ctcaatggcaacaacaaattgttgatctttgtagaaaaacaaatcgatgctgatactttg
gtgttgaatcttttaaagaacaagatcccctgtgtggccatacatggcggtaaaaatcaa
atggatagagcacatgcaatcaaggagttttcagatagagaaagcggtgtcgatatcttg
gtagctacttcgatcgctgcacgaggcctagatgtcaagaatttaagcttggttatcaat
ttcgatcctccgggccatttggaagattatgtacatcgagtcggtaggaccggcagagct
ggcgctatggggagagccattacctttgtgaccaagtctcaagaaaaggaaatcagcatt
ttggtaaaagctctcaaaatgagtctgaatccagttgacccgtccttgcaagaaattgct
gatcgttttgctaaaaaaatcgaatctggagaagaacgcaaaggttttggatttggtggt
aaagggttggataaactacaaaaggtccgcgataataacatgcaaatgcaacgtaaaatg
tttggtggagccaaagaagaggttgaaaataaaaactcgcgagaagccacgaatgaaccg
gatgaagctattctgtcaatggtgttgcccacatttgagatatttgaaggaaactcgccc
gagacttcagggcccgatacttgtaagtttttctgccgaatcacaatcaacgatatgcct
cagaaagtccgatggagcattgttcagggagaaacattggcctcgattgtggactcaaca
aagacgtctataactaccagaggccagttttactcgccccaatctgcagagcaaccaaca
agcgaaaagcccaagttgtatttgttggtggaaggactcactagaaagtcggttgaaaat
gccattgctttgattaaggacaagatgcttcaaagtgtggagctgatgagtttagaagat
tcaaatcgctctgctgcaaccggtcgctacaaagtgtag
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