Lodderomyces beijingensis: 92208474
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Entry
92208474 CDS
T10315
Symbol
LODBEIA_P32780
Name
(RefSeq) uncharacterized protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03013
Nucleocytoplasmic transport
lbg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
92208474 (LODBEIA_P32780)
03015 mRNA surveillance pathway
92208474 (LODBEIA_P32780)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbg03019
]
92208474 (LODBEIA_P32780)
Enzymes [BR:
lbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
92208474 (LODBEIA_P32780)
Messenger RNA biogenesis [BR:
lbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
92208474 (LODBEIA_P32780)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_22
Motif
Other DBs
NCBI-GeneID:
92208474
NCBI-ProteinID:
XP_066830216
UniProt:
A0ABP0ZLN9
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All DBs
Position
4:complement(461639..463231)
Genome browser
AA seq
530 aa
AA seq
DB search
MTTEKKIDADASELLASLSVTSPKTNDQKADPSNLLSGLSLKEEDKAKAGGGDKKPSIEQ
PKTNETGDLKKEGDKFEADKESASKDGDDGDDGKNKVDKPKVVDQEDEPESNLIDNRYEV
EVKLADIQADPNSPLYSVKSFEELGLKPELLKGLYAMKFNKPSKIQEKALPLLISNPARN
MIGQSQSGTGKTAAFSLTMLSRVDENIKAPQCICLAPTRELARQTMEVVETMGKFSKITF
QSVVPDSVARHAAVTAQVLVGTPGSVMDLIRRGAISTAKVKVFVLDEADNMLEAQGLGDT
CLRVKQKLPRDCQLVLFSATFPVDVRKYAERFVPNANSLALKQEELNVAGIKQLYMDCNS
QQHKFEVLCELYGLLTIGSSIIFVEQKQTADNLYIRMKEEGHTVSILHGGLDTQNRDRLI
DDFREGRSKVLITTNVLARGIDIASVSMVVNYDLPTTKEGRPDPSTYLHRIGRTGRFGRV
GVSVSLVASTKDLQILNYIKDYFGGIEMTRVPTDDWDEVEKIVKSVIKKK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaccacggagaagaagattgacgcagatgcatctgagcttcttgctagtctttcagtg
acgtcgccgaaaacgaatgaccaaaaagccgatccatctaatttactctcggggctctct
ttgaaagaagaggataaggccaaggctggtggaggagacaagaagccctcgattgagcaa
cccaagactaatgaaactggcgatttgaagaaggagggagataaattcgaggcggacaaa
gaatccgcgtcgaaagatggagatgatggcgatgatgggaaaaacaaagttgataaacca
aaagtggtggatcaggaggatgagccggaatcaaaccttatcgacaacagatacgaagtc
gaggtcaaattagccgacatccaggccgacccaaactcgcctttatattccgtcaaatcg
tttgaagaattgggcttgaagcccgagctattgaaaggtctctacgccatgaaattcaac
aagccatccaagattcaagaaaaagctttaccgttgctcatctcgaacccggctcgaaat
atgattggtcagtcgcaatcgggcaccggtaagacggctgcgttttcattaacgatgcta
tctcgcgtcgatgaaaacataaaggctccccaatgtatatgtttggcgcccacgcgggaa
ttagcgagacaaacgatggaagttgtggaaaccatgggcaagttttccaagattacgttt
cagtcagtggttcccgactcagtagcgagacatgcggctgtcacggcgcaggttctcgtt
ggtaccccgggtagtgtcatggatttgattagacgcggagccatcagcactgccaaagtc
aaggtctttgtcttggatgaagctgataatatgttggaagcacaggggttgggtgacacg
tgtcttagggtcaagcagaaactaccaagagattgtcaattggtgttgtttagtgccacg
ttccccgtagatgtgagaaagtacgccgagagatttgtgcctaatgccaattcgttggct
cttaaacaagaagagttgaacgtggctgggattaaacaattatacatggactgcaattcc
cagcagcacaagtttgaagtgttgtgcgaattgtacgggctcttgactattggctcatcg
attatctttgttgagcagaaacagactgcggataatttgtacattagaatgaaagaagaa
ggccacaccgtctcgattctacatggtggattagacactcagaacagagatcgcttaatc
gatgattttagagaaggcagatcaaaagtgttgatcactaccaacgtgttggctcgaggt
atcgatatcgcctcggtttccatggtggtcaattacgatttgccaactacgaaagaagga
cgtcctgacccgtcgacgtatttgcatagaattggaagaactggaagattcggcagagtt
ggagtctcggtgtcgctagttgctagcaccaaggaccttcaaatcttaaactatatcaag
gactattttggcggtatcgagatgactcgtgtgcccacggatgattgggatgaagttgaa
aaaatcgtgaaactggtgattaaaaagaaatag
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