Lodderomyces beijingensis: 92208701
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Entry
92208701 CDS
T10315
Symbol
LODBEIA_P35050
Name
(RefSeq) uncharacterized protein
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03420
Nucleotide excision repair
lbg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
92208701 (LODBEIA_P35050)
03460 Fanconi anemia pathway
92208701 (LODBEIA_P35050)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbg03032
]
92208701 (LODBEIA_P35050)
03400 DNA repair and recombination proteins [BR:
lbg03400
]
92208701 (LODBEIA_P35050)
DNA replication proteins [BR:
lbg03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
92208701 (LODBEIA_P35050)
DNA repair and recombination proteins [BR:
lbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
92208701 (LODBEIA_P35050)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
PMC2NT
Motif
Other DBs
NCBI-GeneID:
92208701
NCBI-ProteinID:
XP_066830443
LinkDB
All DBs
Position
4:complement(1090595..1093606)
Genome browser
AA seq
1003 aa
AA seq
DB search
MSLFIEDDDDEVVAESNTDLVLDVDNGDEANREKNGKSSGNARSPPSIPVQYREDDLVPV
YPDREINCALPLKYQQEIVEDMLTKDALLILGRGLGWELLTANLLHALSSPVVELGKSQK
KKSLVFVLNARDDEIVRLKDEFGDLSWLNNGIMGKFVVMAGDSSSSKRKAAYQEGGIISI
STRVLVVDMLSGMVDPNDITGFFVLHAERIRETSNDAFIINLFRDKNDWGFIKAFSDEPE
SFTGFTPLATRLRVLRLENVLLWPRFHVAVTQSFNYHHRKKDTRKFVTEINVKLSYKMSK
IQAALLTCTQACIGELKRHNPSLATEYWDMENVHDPDFAKKVRHSLDSQWHRLTFTTKQL
LSDLATIIDLMNALLTVDSIAFYQTIKNIVDSNIKQQSTGLNRSMSPWLNLDESQTVISY
AKERAIGQQNGEYILEELPKWPQLANLLDDILREKSSNTNDSNSSSNDGPILIMCTSKKV
AHQLRKLLLFMKQESQGDRRRWVDFRPYMISRLHAYLSWKEVNKMVMKLNSELNENPEEN
VNRDAAEITVSKTFSRNGQPVSKRRRTRGASVAARVEQLHSIGNIEDKAQEDEDIKRFVD
DAELGELGESEEFEGLDGADGAEGVEVGDVQPEFVSMDCNTQIIIQVYNDKFSASFLEEL
APSHVIMYQPDLSFIRRVEIFQAINRDSTAKVYFMYYGDSIEEQKHLLRIKKEKEAFTRL
IKEKANLSKHFETSDDNYKFQIKRNSVVNTRIAGGAQFRTESDEMRVVVDVREFGSSLPN
LLYRIGIQVIPCMITVGDYIVSPRICVERKSIPDLISSFKSGRLYNQCEQMFRYYDVPTL
LIEFDENKSFSLEPFSEAKFLKAKNNAVSSMDPKMRQNLQSQILSLLYSFPKLKIIWSSS
PYETAQIFLELKSNQEEPDVGAALDKGVNRGVATQDGGPPVYNDDPIDFIQNIPGINNLN
CHAIIQKVRNIEELVKLSEDEFKAILGNENGRKAHAFLNRKLY
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgtccctattcatcgaagacgatgatgacgaggtagtagcggaatcaaacaccgacctt
gtgctagatgtcgataacggagatgaagcaaaccgcgagaagaatggtaaaagtctgggc
aatgcgaggagccctccctcgattccggtgcagtatcgcgaagacgaccttgttcccgta
taccccgaccgcgagatcaattgcgccttgcctttgaagtaccagcaggagatcgtcgag
gacatgttgaccaaggatgctcttttgattttgggaagaggcttgggctgggaattgctc
acggcaaacttgctacacgcgttgagctcgccagtggtggagttgggaaagtcgcagaaa
aagaaaagcctagtctttgttctcaatgctcgagatgacgagatcgttcggttaaaggat
gagtttggcgaccttagctggttgaacaacggcataatgggcaaatttgtcgtgatggcg
ggggactcgctgtcgtcgaagcggaaagctgcctatcaagaaggcggcataatctcaatc
tcaacgcgggttttggttgtcgatatgctctccggaatggtggatccaaacgatattacg
ggcttctttgtgctccatgctgagaggatccgggaaacttccaacgatgcgtttattatc
aacttattccgcgacaagaatgactgggggttcatcaaggccttttccgatgagcctgaa
ctgtttaccggcttcacgccgttggcaacacggctaagggttttgaggctagaaaatgtg
cttctttggccccggtttcacgttgctgtgacccagtcgtttaattaccaccaccgcaag
aaggacaccaggaagtttgtcacggagataaatgtgaagctctcctacaaaatgagcaaa
atccaagctgcgcttttaacctgcacccaggcctgcattggcgaattaaagcgccacaac
ccatcattggcaaccgaatattgggacatggaaaatgtccacgatcccgactttgcgaaa
aaggttcgccattcgttggactcccagtggcacaggttgacgtttacaacaaaacagttg
ttatcggatcttgcgacgattattgatttgatgaatgcgttgctcactgttgactccata
gcgttttaccagacaatcaagaacatcgtggactcgaatataaagcagcagtcaacagga
ttgaaccgatcaatgagtccatggttgaaccttgacgagtcacagactgtgatcagctac
gccaaggagagagcaattgggcaacagaatggggagtacatcctcgaggagttgccgaaa
tggccacaacttgcaaatcttttagatgacattttgcgcgaaaagagctccaatactaat
gatagtaatagtagtagtaatgatggccccatcttgatcatgtgcaccagcaagaaagtc
gcccaccaattgcgcaagctcttgttgttcatgaagcaggaatcacaaggagaccggcga
cgatgggttgactttaggccatatatgatctccagattgcacgcatacctcagttggaag
gaagtcaacaaaatggtgatgaagctaaactccgagctcaatgagaatcccgaggaaaac
gtaaacagagacgcagcggaaatcacagtttcgaaaaccttttctaggaatggacagccc
gtgagcaagaggaggaggacgcgaggtgcgtcagttgcagctagagtcgagcagttgcat
tcaatcggtaacattgaggacaaggcgcaagaagacgaagacataaagaggtttgtggac
gatgcagaacttggggaactcggggagtctgaggaatttgaaggacttgatggtgctgat
ggtgctgaaggtgttgaagtcggtgacgtacagcctgaatttgtgagtatggactgcaac
acccagatcatcattcaggtctacaatgacaagttcagtgcatcctttttggaagagcta
gcgccatcgcatgtgatcatgtaccagccagatctctcgttcatcagaagagtagagata
ttccaggcaatcaaccgagattctacagcaaaagtgtactttatgtactatggtgactcg
attgaagagcagaagcatctattgagaatcaaaaaggaaaaagaggcgtttacaaggttg
ataaaagaaaaggcaaacttgagcaagcattttgaaacctcggatgacaactacaaattc
cagatcaagcgcaacctggtcgtgaatacaaggatcgccggcggtgcccaatttcgaacc
gagagtgacgagatgcgtgtcgtggtggacgtcagagaatttgggtcctcgttgcccaat
ttgctctaccggattgggatacaggtgatcccttgcatgataaccgtgggcgactacatc
gtttcgcccagaatctgcgtagaaagaaaatctattccagacttgatatccagttttaag
agcgggcggctttacaaccagtgtgagcagatgtttcggtactacgatgtaccgaccttg
ctaattgagtttgatgagaacaagtctttctccctcgagccatttagtgaggccaaattc
ttgaaagcgaaaaacaacgcggtaagctcgatggatccgaaaatgaggcagaatttgcaa
tcacaaatcctttccttgctctactcgttccccaaattgaaaatcatatggtcctcgtct
ccatatgaaaccgctcagatttttttggagctcaagtcgaaccaagaggagcccgatgtg
ggggcggcgttggacaaaggtgtcaaccgtggcgtggctactcaagacggcgggccgcct
gtttacaacgatgacccgatcgactttatccagaacattcctggcataaacaatctcaat
tgccacgctatcatccaaaaagttagaaacatcgaagagttggtcaagttgtcagaggat
gaatttaaagctatattaggaaacgaaaatggccggaaagcacacgcttttttgaacagg
aagttgtattaa
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