Lodderomyces beijingensis: 92209021
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Entry
92209021 CDS
T10315
Symbol
LODBEIA_P38250
Name
(RefSeq) translation elongation factor EF-1 alpha
KO
K03231
elongation factor 1-alpha
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
92209021 (LODBEIA_P38250)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbg03019
]
92209021 (LODBEIA_P38250)
03016 Transfer RNA biogenesis [BR:
lbg03016
]
92209021 (LODBEIA_P38250)
03012 Translation factors [BR:
lbg03012
]
92209021 (LODBEIA_P38250)
04131 Membrane trafficking [BR:
lbg04131
]
92209021 (LODBEIA_P38250)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lbg04147
]
92209021 (LODBEIA_P38250)
Messenger RNA biogenesis [BR:
lbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
92209021 (LODBEIA_P38250)
Transfer RNA biogenesis [BR:
lbg03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
92209021 (LODBEIA_P38250)
Translation factors [BR:
lbg03012
]
Eukaryotic type
Elongation factors
92209021 (LODBEIA_P38250)
Membrane trafficking [BR:
lbg04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
92209021 (LODBEIA_P38250)
Exosome [BR:
lbg04147
]
Exosomal proteins
Proteins found in most exosomes
92209021 (LODBEIA_P38250)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
92209021
NCBI-ProteinID:
XP_066830763
LinkDB
All DBs
Position
4:1880998..1882377
Genome browser
AA seq
459 aa
AA seq
DB search
MGKEKTHVNVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVL
DKLKAERERGITIDIALWKFETPKYHVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGT
GEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDSVKWDKNRFEEIIKETSNFVKKVG
YNPKSVPFVPISGWNGDNMIEPSANCPWYKGWEKETKAGKSTGKTLLEAIDAIEPPQRPT
DKPLRLPLQDVYKIGGIGTVPVGRVETGIIKAGMVVTFAPAGVTTEVKSVEMHHEQLVEG
VPGDNVGFNVKNVSVKEIRRGNVCGDSKNDPPKGCDSFNAQVIVLNHPGQISAGYSPVLD
CHTAHIACKFDTLIEKIDRRTGKKLEDEPKFIKSGDAAIVKMVPTKPMCVEAFTDYPPLG
RFAVRDMRQTVAVGVIKSVEKSDKAGKITKAGAKAAAKK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagaaaagactcacgttaacgtcgttgtcattggtcacgtcgattctggtaaa
tcgaccaccaccggtcacttgatctacaagtgtggtggtatcgacaagagaaccattgaa
aagttcgaaaaggaagctgctgaattgggtaaaggttccttcaaatacgcttgggttttg
gacaagttgaaggccgagagagaaagaggtatcaccatcgatatcgctttgtggaagttc
gagactccaaaataccacgttaccgttattgatgctccaggtcacagagatttcatcaag
aatatgattactggtacttcccaagctgactgtgctattttgatcattgctggtggtacc
ggtgagtttgaagctggtatctccaaggatggtcaaaccagagaacacgctttgttggct
tacaccttgggtgtcaagcagttgattgttgccgtcaacaagatggactctgtcaagtgg
gacaagaacagatttgaggaaattatcaaggagacctcgaacttcgtcaagaaggttggt
tacaacccaaagagtgtgccatttgttccaatctctggttggaacggtgacaatatgatt
gagccatccgccaactgtccatggtacaagggttgggaaaaggaaaccaaggctggtaag
tccaccggtaagactttgttggaggccattgacgccattgagccaccacagagaccaacc
gacaagccattgagattgccattgcaagatgtctacaagattggtggtatcggaactgtg
ccagttggtagagttgaaaccggtatcatcaaggctggtatggttgtcacttttgcccca
gctggtgtcaccactgaagtcaagtccgtcgaaatgcaccacgaacaattggttgaaggt
gtcccaggtgacaatgttggtttcaacgtgaagaatgtttccgttaaggaaatcagaaga
ggtaacgtttgtggtgactccaagaacgacccaccaaagggttgcgactccttcaatgct
caagtcattgtcttgaaccacccaggtcaaatctctgctggttactctccagtcttggac
tgtcacactgctcacattgcttgtaaattcgacaccttgattgaaaagattgacagaaga
accggtaagaagttggaagacgagccaaaattcatcaagtctggtgacgctgctatcgtc
aagatggtcccaaccaagccaatgtgtgttgaggccttcaccgactacccaccattggga
agattcgctgttagagacatgagacaaaccgttgctgttggtgtcatcaagtctgttgag
aaatccgacaaggctggtaagatcaccaaggccggtgctaaagctgctgctaagaagtaa
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integrated database retrieval system
