Lodderomyces beijingensis: 92209026
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Entry
92209026 CDS
T10315
Symbol
LODBEIA_P38300
Name
(RefSeq) uncharacterized protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03440
Homologous recombination
lbg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
92209026 (LODBEIA_P38300)
03460 Fanconi anemia pathway
92209026 (LODBEIA_P38300)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbg03032
]
92209026 (LODBEIA_P38300)
03400 DNA repair and recombination proteins [BR:
lbg03400
]
92209026 (LODBEIA_P38300)
Enzymes [BR:
lbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
92209026 (LODBEIA_P38300)
DNA replication proteins [BR:
lbg03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
92209026 (LODBEIA_P38300)
DNA repair and recombination proteins [BR:
lbg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
92209026 (LODBEIA_P38300)
Bloom's syndrome complex (BTR)
92209026 (LODBEIA_P38300)
FA (Fanconi anemia) pathway
92209026 (LODBEIA_P38300)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
92209026
NCBI-ProteinID:
XP_066830768
LinkDB
All DBs
Position
4:complement(1889225..1892791)
Genome browser
AA seq
1188 aa
AA seq
DB search
MLKGNNLAVHLEWFKEAKPNLPPKQLIDAVLREYPSQPLPLTTTRPACNNYHHQNQVTQN
VSIVGDCVVTTMSKDDNRALVAPESRTRTGMGPEMATTTRPNKSQQSATNINSSFSISSY
METPSQPSASRKPKKKSPVQQHEVSKFFQTGPRTQTSLDVIDLTFDFSPPKKRSASEAAS
NSQTKKSKTGINNKKDHERLRQYMELSRLQEGKITLLQEKFVTSESTSISLDQKQEHYAI
LQSRVEALDVQIATLRSLIDSYPANELPSPPEFKRADPNPNPAIPAIPAISAIPHPNTNT
NTNTANYSTTQSNVEVTDDIDESTNEVPVFRPPARPTPIAQARQIVSNTPANEDDNYGNY
DNNSLAEIEDDFGEQTMEGLRTPTQERDLLDDMGSFIDDGSIAEPEDDDDDDDDDDYTAA
AESQYALPIDKDELDDLRLSPDVARKFGINYDDDDEGPPPLSLVHKREPPNGSDVSGSNM
SGSHVSSSNQETSHDAVEDDDDDGGGDDGGGGDDGGGIDHGFVDDIEFSTQLNQEREIDV
IEIESEDDDENTALSDLIVPRFAESNHDSSKTNGAATMNISAGLNAQAATFLHSQSENEA
QASGGRPLPPPTPQPPLLNLDSEDEFSDEDDELMQIINGAKESRSSRVVPPGSELFIDEI
YTTLNRTFKLQSFRPNQLEAIVATILKKDCFVLMPTGGGKSLCYQLPALIKGGKSQGTTV
VISPLISLMHDQVQHLVKMDVKAGMISSRASTEDNKHTVNLFRDGLLDIVYLSPEKANKS
AMIQRIIGKLYDQNKLARVVIDEAHCLSSWGHDFRPDYKGMSFFKEQYPAVPVMALTATA
NEKVRMDIIHNLKLKSPVFLKQSFNRTNLFYEIKWKKKDYVEEIKEYIVRRFPKSTGILF
CHSKQACEDVSDKLNQLGLSTGYYHAGMSTEERFAAQHLWQTGKIKVVCATIAFGMGIDK
ADVRFVIHLFIPRSLEGYYQETGRAGRDGNFSECILYYCYKDARSLQNLIHRDENLTEEG
KENHLAKLRQVVQYCENTTDCRRQQVLHYFNESFSPAECRKNCDNCKNYNHVTVVEKDCT
EYAQDIIKLVKSIQSEKVTVLHCQDVFRGLKHNKITKMGHNNNPYHGKGKTLDKTDAERI
FFYLLSEECLVEYQVMKAGFASNYVRAGKHASKVLNGRKKIKIQFSSA
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaaggtaacaacttagccgttcatcttgaatggtttaaagaagcaaagccaaat
ctacctccgaaacagctaatagacgcggtgttgcgggaatacccatcgcaacctctacct
ttgactacgactaggccggcttgtaacaactaccaccaccagaaccaagtaacgcagaat
gtttcgattgttggagactgcgttgtaactacaatgtcgaaagacgacaatagagcccta
gttgcaccagagtcgcggacgcgaacaggaatggggcccgagatggcaacgacgacgcgt
ccaaacaaaagccagcagtcagccaccaacataaactcatctttcagcatctcctcgtac
atggaaacaccgtcccagccatcagcatcaaggaaaccgaaaaaaaaatctcccgtgcaa
caacacgaggtttcgaagttcttccaaaccggccctcgcacccaaacactgttggatgtg
attgatctcacgtttgactttagtcctccaaagaaacgtctggcgctggaagcagcctcg
aactcgcaaacgaaaaaatcgaaaactggcataaataacaagaaagaccatgaaaggcta
cggcagtacatggagctctccaggcttcaagaaggcaaaatcacactattgcaagaaaag
tttgtcaccagtgagtcgacatccatctcgctagatcagaaacaggagcactatgctatt
ctacagtcgcgggtagaagcactcgacgtccaaatagccacattgcgaagcctaatcgac
tcttatcctgcaaacgagcttccctcgccaccggagtttaaacgggccgaccccaatcct
aaccctgctatccctgcaatccctgcaatctctgcaatccctcaccctaatactaatact
aacactaataccgccaattactcaacaacgcaaagcaatgtcgaagtcaccgacgacatt
gatgagtcaactaacgaagtgcccgtgtttcgaccgccggcacgaccaactccaatagca
caggcacgccagattgtttccaatacaccagcaaatgaagacgacaactacggcaactac
gacaataatctgttggcagagattgaggatgactttggcgagcaaacaatggaggggctc
agaacacctactcaggagcgagatttactcgatgacatggggagcttcatcgacgacggt
tccattgccgaacccgaagatgacgacgatgacgacgacgatgatgattatactgctgct
gctgagctgcagtacgctcttcccattgataaagacgaattggatgatcttagactatcc
cccgatgtggcacgaaaattcggaatcaattatgatgatgatgatgaaggtccccctcca
ctctcactagtgcataagagggaaccaccgaatggttccgatgtgagtggctctaatatg
agtggctctcatgtgtcctcttctaaccaagaaacaagtcacgatgcagtagaagacgac
gacgacgacggcggcggcgacgacggcggcggcggcgacgacggcggcggcattgaccat
ggtttcgttgacgacatcgagttctcgacgcagttgaaccaggagcgtgaaatcgacgtg
attgaaattgaatctgaagacgacgatgaaaacacggcgttgagcgatttgattgtaccg
cgttttgctgaatccaaccacgacagcagcaagaccaatggcgccgcgacaatgaacatt
tcagctggtctcaatgctcaggctgctacgtttctacattcacaactggaaaatgaagct
caagcaagcggcggccgtcctctaccaccaccaacaccacaaccaccactactcaatctt
gactctgaggatgaattcagcgatgaagacgatgagttgatgcaaatcatcaacggtgcc
aaggaactgagaagttctcgagttgttccaccaggctcagaattgtttattgatgaaatc
tacaccactttgaaccgcacgttcaaattgcagtcgtttcggcccaaccagttggaagcc
atcgttgccaccatattgaaaaaagattgctttgtgttgatgccaactggaggtgggaaa
tcgctctgttaccagctacctgcgttgatcaaaggcggcaaaagccaaggcacaaccgtg
gtgatctcgccccttatctccttgatgcacgaccaagtgcagcatcttgtcaaaatggat
gtcaaggccggtatgatcagttccagagccagcactgaggataacaaacacaccgtgaac
cttttccgcgacgggttgctcgatatcgtctacttgtcgccggaaaaggccaacaagtcg
gccatgatccaaaggatcatcggcaagttgtacgatcaaaacaaattggccagagttgtt
attgacgaggcgcactgcttgagttcgtggggccacgatttccgtccagattacaaaggt
atgagtttctttaaagagcaatatccagctgtccccgttatggcattgactgccactgct
aatgaaaaagtgcgtatggatatcattcataatttgaaattgaaatcaccggttttcctc
aaacagagcttcaacagaaccaacttgttttacgagatcaagtggaaaaagaaggactac
gtggaggagattaaagaatatattgtaaggcgcttcccaaaaagcaccggtatcttgttt
tgccacagtaaacaagcgtgtgaagacgtgtcggataaattgaatcagcttggcttatca
acggggtactatcatgcggggatgtcgacggaggagcggtttgcagcacagcatctttgg
caaacgggcaagatcaaagtcgtgtgcgccacgattgcatttggtatggggatcgacaag
gccgacgtgcgatttgtgattcacctattcattccaagaagcttggaaggctactaccag
gaaactgggcgtgctggacgtgatggcaatttctccgaatgcattttatactattgctat
aaagatgccaggtcacttcaaaacttgattcacagggacgaaaatctcacagaagaaggc
aaggagaaccatttggcgaaattgagacaggttgttcaatattgcgaaaacaccaccgat
tgtcggcggcagcaagtgttgcactacttcaacgaatccttcagccccgccgaatgtaga
aagaactgcgacaactgcaaaaactataaccatgtcacggtggtggaaaaggactgcacc
gagtatgcccaggacataatcaaactagtcaagtcgatccaaagcgaaaaagtcaccgtg
ttgcattgccaagacgtcttccgtggcttgaaacataacaagatcaccaagatgggccat
aacaataacccttaccacggcaaagggaaaaccctcgataaaaccgatgctgaacgaatc
tttttctatttattaagcgaagagtgtcttgttgagtaccaggttatgaaggcggggttt
gcttccaattacgttcgagccggtaagcatgcttcgaaagtgctcaatggtcgaaagaag
attaaaatccaatttagctctgcctag
DBGET
integrated database retrieval system
