Lodderomyces beijingensis: 92209151
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Entry
92209151 CDS
T10315
Symbol
LODBEIA_P39550
Name
(RefSeq) uncharacterized protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92209151 (LODBEIA_P39550)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbg03019
]
92209151 (LODBEIA_P39550)
03041 Spliceosome [BR:
lbg03041
]
92209151 (LODBEIA_P39550)
Messenger RNA biogenesis [BR:
lbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
92209151 (LODBEIA_P39550)
Spliceosome [BR:
lbg03041
]
Complex B
Other components
Prp19-related factors
92209151 (LODBEIA_P39550)
Complex C
92209151 (LODBEIA_P39550)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_M
HAT_PRP39_N
HAT_PRP39_C
Mad3_BUB1_I
TPR_12
Motif
Other DBs
NCBI-GeneID:
92209151
NCBI-ProteinID:
XP_066830893
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All DBs
Position
5:57534..59348
Genome browser
AA seq
604 aa
AA seq
DB search
MISIDDLVEDTDLTYEGELAKNANQVDTWLSYYDSKINESLGSRLFVIRRAIEANREDAR
LWKIYLDLVLEESDDIGPEDQFSAFDEFAKIQNQPWALSLWSRVLGFLIEQHVEHVTYIR
HKFNQCLQNLPVEDHGSIWPLALSFADSIGGKTAVNIYKRFITFVDPRVLRGLEDSEETE
TSLNMLDFISKLNKFGDVDTVLKLYDEITASNAYSKLPASQLAIHLDYLNFMIQNRKSST
SDKKFGEIVSRATKKFPDQSMRLQQLYIKYLLAAENPDKSQIRKLYKQALADCKTVHDFK
DIYNGLAEFEEDEIQQQIIPTDPQSKDSKDLKRALDEYEKLLNDRKLLVNDIQLRKDINN
VDYWFTRFEIHQAQLPLKIKAIAESIKSINPLKIPRGCTHKLSDIWKMYAEIYSSSSDFK
TADFILSKSVQSQYPHPDELAGLYIYWGEMRLSNDYFAEESALELFQEILFKEEAESFHY
LDSQISVQRRITKSIKLWQFYIDLLESFIDDGELGNKQADQVVEAYEQMISLKIASGNTM
MKYASFLEEQQQIEKSLSIYERALVIFKDELIQREIWKVYSTKLPLIDNKERVKDIKERF
NNLD
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgatctctattgatgacttggtggaagataccgacttgacttatgagggagaactagcg
aaaaatgcaaatcaagtagatacatggttatcatactacgactcaaagattaatgagtcg
cttgggtcaagattgttcgtcattagaagagccattgaggccaacagagaggatgcacga
ctatggaagatctacctcgacttggtgctagaggaactggacgatataggccccgaggac
caattttcagcatttgatgagtttgccaaaatacagaaccagccgtgggctttaagcttg
tggtcccgagttttggggtttctaattgagcagcacgtggagcatgtaacctatataaga
cataagttcaaccagtgtttgcaaaatttgccggtggaggatcatggatcgatttggccg
ttggcgttgtcctttgcggattcgattggtgggaaaacagctgtcaatatttacaagagg
tttatcacatttgtcgacccgcgcgttctcaggggacttgaagatagcgaagaaactgaa
acgtcgttgaacatgctcgatttcattagcaagctcaacaagtttggagacgtggacacg
gtcttgaaattatacgacgagatcaccgcgtcaaatgcatactcaaagctaccggcctct
caactcgcaatccacttggactatttgaactttatgattcaaaatcgtaaatcctcaacc
agcgataaaaagtttggcgagattgtgctgcgagcaacgaaaaaattccccgatcagtca
atgagactacaacaactttacatcaagtatttattagcagctgaaaacccggacaagtct
cagatacgaaagctatacaagcaagcactcgccgattgcaaaaccgtgcacgacttcaaa
gacatctacaatggcctcgccgagtttgaagaagatgagatccaacaacaaataattcca
accgacccgcaatcaaaggattcaaaagatttaaaacgtgccctagacgagtacgagaaa
ctactaaacgacagaaagctacttgtaaacgacattcagcttcgcaaagacatcaacaac
gtagactactggttcacgaggtttgaaatccatcaagctcaactcccactcaagatcaag
gccattgcagagtcgattaaatcaatcaacccattgaaaatcccgcgcggatgcacccac
aagctatcagacatttggaagatgtacgccgagatatacagctcctcgtccgatttcaaa
actgccgatttcatattgtccaaatcagtgcaatctcaatatccgcatcctgacgagcta
gccggtttgtacatttattggggtgaaatgagactaagcaatgactattttgccgaagag
ctggcattggaattgtttcaagagattctctttaaagaagaagctgaatctttccattac
ttggattcgcaaattagcgtgcaaagacgcatcaccaagtccatcaaactatggcaattc
tatatcgatttgcttgaatcatttatagatgatggtgagttggggaacaagcaagctgac
caagtagtggaggcgtatgagcaaatgattagcttaaagattgcctcggggaacacgatg
atgaaatacgcactgtttttggaagagcagcagcagattgagaaactgttgagtatatac
gagcgagctttggtgattttcaaagacgagttgatccagagggagatttggaaggtgtac
ctgaccaagttgccgttgattgacaataaagagcgcgttaaggacataaaagagagattc
aataatctagattag
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