Lodderomyces beijingensis: 92209435
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Entry
92209435 CDS
T10315
Symbol
LODBEIA_P42390
Name
(RefSeq) uncharacterized protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
92209435 (LODBEIA_P42390)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbg03400
]
92209435 (LODBEIA_P42390)
Enzymes [BR:
lbg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
92209435 (LODBEIA_P42390)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
92209435 (LODBEIA_P42390)
DNA repair and recombination proteins [BR:
lbg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
92209435 (LODBEIA_P42390)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
Motif
Other DBs
NCBI-GeneID:
92209435
NCBI-ProteinID:
XP_066831177
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All DBs
Position
5:join(831177..831194,831276..832601)
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AA seq
447 aa
AA seq
DB search
MPEVSEVAHVCALLRRQTLGFRVVGASVPVDSLLWPSIKAASNAEDEAERIKTQLVGSSV
ISTGRHGKYFWLRLKPKDVDRTNVLLMHFGMTGMIKIRNVKSHLIFMENGGDKKLVEQEK
MAANLQEEVAEPDTSWPPRFTKFELELLKDGVKLEVAFVDARRLGRARLVQDDKAQTDEG
LLKLPPLNALGPDYSKAQHVAKTTKTPSSEAAAFEFGDPDPDHHGRPRLGVEAFSKLVLS
RKKAIKTLLLDQALFAGVGNWVGDEVIFHAKLHPEEVISSKISHEEGDSIHPVIQNLYNS
LIYVCEESVKVEGAVRKFPKHWLMRHRWGKARKRQGPSKTEEGHVLDHITVGGRTSCFAP
EVQKFLKVGKPKPVAVKTETETTSKRKRLLSSHDDEDSKSQPCKPKKPTSSKRQKVDQAS
VSNGKDGEHKTVKTRTSARIKAMSRQQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgccagaggtatccgaggtggctcatgtttgcgcgttgttgagaaggcaaaccctcggt
ttccgagttgttggggcctcagttccggttgactccttgctatggccgtcgataaaggca
gcttcgaacgctgaagatgaagcagaaagaatcaaaacgcaattggtaggctcaagcgtc
atttctactggtcggcatggcaagtatttttggttgagattgaaacccaaagatgttgac
cgtacaaacgtgttgctcatgcactttggcatgacgggaatgatcaagatccgaaatgta
aagtctcacttgatctttatggagaacggcggggacaaaaaattggttgaacaagagaaa
atggcggctaatttgcaagaggaagtagcagagccagatacgagttggccgccgaggttc
acaaagtttgagttggaattgctcaaggacggcgtcaagttggaagttgcctttgtagat
gcaagacgactcggtagagcacgtcttgtacaggatgacaaagctcaaaccgacgagggg
ctcttgaagctaccgcccttgaacgctctaggtccggattatagtaaagcacagcatgtc
gcaaaaaccacaaaaacaccatcatctgaggctgctgcgtttgagtttggcgatcccgat
ccagaccatcatggacgacccaggctaggggtagaggcgtttagcaaacttgtgctatcg
aggaaaaaagcaatcaagaccttgctccttgatcaagcgctatttgcaggagtggggaac
tgggtaggagacgaggttatatttcacgcaaagttgcaccccgaggaagtgatctcgctg
aaaataagccacgaagaaggagacctgatacatcccgtcatccaaaacttgtacaactcc
ttgatttacgtctgtgaggagtcggtaaaagtggaaggtgcggttagaaagtttccgaaa
cattggctcatgcggcatcgatggggcaaggctagaaagaggcaaggtccgtcgaaaaca
gaagaggggcacgtcttggatcacattaccgtcggcggtcgaacgagctgctttgcgcca
gaggtgcaaaagtttctaaaagtggggaaaccgaagcctgttgctgtaaagacagagaca
gagaccacactgaagaggaagcggcttttactgtcacacgatgacgaagattccaaaagt
caaccatgtaaaccaaagaaaccaacttcctcaaaacgccaaaaagttgatcaagcctca
gtcagcaatggcaaagacggggagcataaaacagtgaaaactagaactagtgctaggata
aaagccatgagtagacaacagtag
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