Lodderomyces beijingensis: 92209722
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Entry
92209722 CDS
T10315
Symbol
LODBEIA_P45260
Name
(RefSeq) uncharacterized protein
KO
K07466
replication factor A1
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03030
DNA replication
lbg03420
Nucleotide excision repair
lbg03430
Mismatch repair
lbg03440
Homologous recombination
lbg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
92209722 (LODBEIA_P45260)
03420 Nucleotide excision repair
92209722 (LODBEIA_P45260)
03430 Mismatch repair
92209722 (LODBEIA_P45260)
03440 Homologous recombination
92209722 (LODBEIA_P45260)
03460 Fanconi anemia pathway
92209722 (LODBEIA_P45260)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbg03000
]
92209722 (LODBEIA_P45260)
03032 DNA replication proteins [BR:
lbg03032
]
92209722 (LODBEIA_P45260)
03400 DNA repair and recombination proteins [BR:
lbg03400
]
92209722 (LODBEIA_P45260)
Transcription factors [BR:
lbg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
92209722 (LODBEIA_P45260)
DNA replication proteins [BR:
lbg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
92209722 (LODBEIA_P45260)
DNA repair and recombination proteins [BR:
lbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
92209722 (LODBEIA_P45260)
MMR (mismatch excision repair)
92209722 (LODBEIA_P45260)
DSBR (double strand breaks repair)
HR (homologous recombination)
92209722 (LODBEIA_P45260)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
Rep-A_N
DUF223
CDC24_OB3
POT1
BRCA-2_OB1
DUF8448
BRC-2_C
Motif
Other DBs
NCBI-GeneID:
92209722
NCBI-ProteinID:
XP_066831464
UniProt:
A0ABP0ZQ93
LinkDB
All DBs
Position
5:complement(1496403..1498319)
Genome browser
AA seq
638 aa
AA seq
DB search
MTSFQLSKGTLKEIFSKAGFGKPVKQIVVQITNMKAIDTINNQRKYRVLITDGIYSTHGL
IDEKCTPYLENNNCTRYATIQINKYTLLGSTKHFVLIEDFEILNNKGEKTVEKPIGVDDY
FAEHPDEGHFQIAKKQDSMDSGARNESPAPTRATPPVAHSTYSNEMSKYPKPRGAPAGSG
APAPRISPIETLSPYQNNWTIKARVSYKGDLRTWSNAKGEGKVSSINFLDESDEIKASAF
NETAERAHNLLEEGKVYYISKAKVSAARKKFNNLSHPYELQLDKDTEITECFDESDVPKL
SFNFVKLDQIQNLEQNAIVDVMGALKIVNPSFQITAKSTGKAFDRRDITIVDETGFAIDV
GLWNNTALDFNVEEGTVIAFKGCKVSDFNGRTLGLTQSGSLIPNPGTPESYQLKGWYDNI
GVKENNYKSLKNELGSGGLSAQEKIAQRKLIAQAEEENIGANGGDKPEYFTTKASFSYSK
PDNFAYPACNNRLSNSGDSTRPANPCNKKLAQLGDKWSCERCNIEYDEPTWRYILNCAIM
DSSGQIWVTLFDEQAKKLLGMDANQLMQLSQEEAASDKNPVAEVMQKNYFKEFNFRIRAK
QDTFNDQLKIRYQCVGLFDVDFNAECEYLCRELDATLA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgttccagctctccaagggaactttgaaagagattttctccaaagccgggttt
ggtaaacccgttaagcagattgttgttcaaataacaaacatgaaggcaatcgacaccatc
aataaccagaggaagtaccgtgtgctcatcactgatggcatctatagcacacatggcttg
atagacgaaaagtgtacgccttatttggaaaacaacaattgtacaaggtacgccaccatt
caaatcaacaaatacaccttgttgggctcgacaaagcacttcgtgcttattgaagatttt
gaaatcttgaataacaaaggcgagaagacggtggagaagcccattggtgtcgatgactat
tttgctgagcatcctgacgagggacatttccaaattgccaagaaacaagactcgatggat
tccggagctagaaacgaatctcctgctcctacaagagcaacgccaccggttgcacactct
acttattccaacgaaatgtccaaataccccaaacccagaggtgcccctgccggaagtgga
gccccggcaccaagaatctcaccaattgaaaccttgtctccgtatcaaaacaactggacc
atcaaagctcgcgtctcgtacaagggtgatttgagaacttggtcaaatgccaagggtgaa
ggcaaagtgtcgagcataaactttcttgatgagtcggacgaaattaaagcttcggcattt
aatgaaacggcagagagagcccacaatttacttgaagaaggcaaagtttactacatctca
aaggccaaagtttccgcagctagaaagaaattcaacaatttgtcccatccatatgagtta
caacttgataaagacaccgaaatcaccgagtgttttgatgaatccgatgtacccaaatta
agcttcaattttgtcaaattggaccaaattcaaaacttggaacaaaatgccatcgttgat
gttatgggcgctttaaaaatcgtcaatccttccttccaaatcaccgccaagtccacgggt
aaagcattcgatagaagagacatcaccattgtcgacgaaactgggtttgccatcgatgtg
ggtttatggaacaacaccgctttggacttcaatgttgaagaaggtaccgtgattgcattt
aaaggctgcaaagtgtcagacttcaatggaagaaccttgggtttgacgcaatcgggttcc
ttgatccccaacccaggcacaccagagtcgtaccaattgaaaggctggtacgataatata
ggcgtcaaggaaaacaactacaagtccttaaagaatgagttgggatcgggaggattatca
gcccaggaaaagattgcgcaaagaaaattgattgctcaagcagaagaagaaaacattggt
gctaacggaggtgacaagccggaatacttcaccacgaaagcaagcttctcctattcaaag
cctgacaactttgcctatcccgcatgcaataatagactcagtaactcgggagatagcact
agacctgcgaatccatgtaacaagaaattggcccagttaggtgacaagtggtcctgtgaa
cgttgcaatatcgaatacgacgaacccacatggcgttatatcttgaactgtgccatcatg
gactcatcgggtcaaatatgggtcaccttgtttgacgaacaagcaaagaagttattagga
atggatgcaaatcaattgatgcaattgagtcaagaagaagccgctagtgacaagaacccc
gttgctgaagtcatgcagaaaaactatttcaaagagtttaatttcagaattagggccaag
caagatacatttaatgatcagttgaaaatcaggtatcaatgcgtcggcttgtttgatgtt
gattttaatgctgaatgcgaatatctatgccgagaattggatgctactttggcataa
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