KEGG   Lodderomyces beijingensis: 92209772
Entry
92209772          CDS       T10315                                 
Symbol
LODBEIA_P45760
Name
(RefSeq) uncharacterized protein
  KO
K10756  replication factor C subunit 3/5
Organism
lbg  Lodderomyces beijingensis
Pathway
lbg03030  DNA replication
lbg03410  Base excision repair
lbg03420  Nucleotide excision repair
lbg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lbg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    92209772 (LODBEIA_P45760)
   03410 Base excision repair
    92209772 (LODBEIA_P45760)
   03420 Nucleotide excision repair
    92209772 (LODBEIA_P45760)
   03430 Mismatch repair
    92209772 (LODBEIA_P45760)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lbg03032]
    92209772 (LODBEIA_P45760)
   03036 Chromosome and associated proteins [BR:lbg03036]
    92209772 (LODBEIA_P45760)
   03400 DNA repair and recombination proteins [BR:lbg03400]
    92209772 (LODBEIA_P45760)
DNA replication proteins [BR:lbg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    92209772 (LODBEIA_P45760)
  DNA Replication Termination Factors
   ELG1-RFC complex
    92209772 (LODBEIA_P45760)
Chromosome and associated proteins [BR:lbg03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    92209772 (LODBEIA_P45760)
DNA repair and recombination proteins [BR:lbg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     92209772 (LODBEIA_P45760)
  Check point factors
   HRAD17(Rad24)-RFC complex
    92209772 (LODBEIA_P45760)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA Rad17 AAA_22 nSTAND6 Sigma54_activ_2 Mg_chelatase AAA_24 RKP_N FUSC
Other DBs
NCBI-GeneID: 92209772
NCBI-ProteinID: XP_066831514
LinkDB
Position
5:complement(1600283..1601371)
AA seq 362 aa
MSLWVDKYRPKTLSTLSYHDNITQNLRALSKSGDFPHLLVYGPSGAGKKTRIYATLEEIF
GPSVEKLKIDVKNFTTASNRKLEFNVLSSPHHLEITPSDMGNNDRVVIQDLLKDVASTEQ
VDFGNQSSRKHRFKVVVINEADSLSRDAQAALRRTMEKYSSNIRLILVCNSISNIIAPIK
SRTLLVRIPAPSVEDISRILSHVAEHENIKFSSSDEHAVAQFYKQVATTSERNLRRSLLA
FETISMQNETINVKHIHSVIVLDWETIIKNMAKSISTQRNVPNLARLRTTSYELLSHCIP
ARTILKKLVMELVSMFMTRGDLVKEIVQIGSVFDERLSLGTKSIFHLEGFVAKTMVAIDA
QS
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgtctctctgggtggacaaataccgtccaaagacgctctcaacactatcataccatgac
aatataactcaaaacctcagggcgctctcgaaatcaggcgatttcccccatttgcttgtc
tatggaccaagtggagcaggtaaaaagacgagaatctacgccacgctagaagagatattc
ggtccgtcagtggaaaagctcaagattgatgtcaaaaacttcaccactgcgctgaataga
aaattggagttcaatgttttgagctcgcctcaccatttggaaatcactccttccgacatg
ggaaataacgatcgggtcgtgattcaggatttgttgaaagatgtcgcctcgacggaacaa
gtcgatttcggcaaccagagctcaaggaagcaccggttcaaagttgtcgtcatcaatgag
gctgattcgttgagtagagacgctcaggctgcgttgaggagaaccatggagaagtactct
tccaatatccggttgattcttgtgtgcaactcgatttcaaacatcatcgcgcccatcaaa
tcgaggactttgcttgtgaggataccggccccgtcagttgaagacatcagcaggatcttg
agccatgttgctgagcatgaaaacattaagttttcatcgagtgacgaacacgccgtggcg
caattttacaagcaagttgccaccacgagcgagaggaacttgaggaggtctttgcttgcg
tttgagacaatttccatgcagaatgaaaccataaatgttaagcacatccactcggttatt
gtccttgactgggaaaccatcatcaagaatatggccaagtcgatatcaacgcagcggaac
gtgcccaatttggcgaggttgagaaccacgagctatgaattgttgtcgcactgtatacca
gctaggaccattttgaagaaacttgtgatggagttggtcagtatgttcatgacaagaggt
gatctcgtgaaggagattgtgcaaattggctctgtgtttgacgagaggttgagtttgggg
acaaagagcatattccatctagaggggtttgtggccaagactatggttgcgatcgacgcc
caaagctga

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