Lodderomyces beijingensis: 92209807
Help
Entry
92209807 CDS
T10315
Symbol
LODBEIA_P46110
Name
(RefSeq) uncharacterized protein
KO
K14327
regulator of nonsense transcripts 2
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03013
Nucleocytoplasmic transport
lbg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
92209807 (LODBEIA_P46110)
03015 mRNA surveillance pathway
92209807 (LODBEIA_P46110)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbg03019
]
92209807 (LODBEIA_P46110)
Messenger RNA biogenesis [BR:
lbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
92209807 (LODBEIA_P46110)
mRNA cycle factors
P-body specific factors
92209807 (LODBEIA_P46110)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
92209807
NCBI-ProteinID:
XP_066831549
LinkDB
All DBs
Position
5:complement(1684506..1687754)
Genome browser
AA seq
1082 aa
AA seq
DB search
MTLELDGWRRHLLELNLQAWENEFSFPVATKLDSSLKKNTAFIKKIKTSLNPDQLENILA
DIKTVSLEKYLSEVIASLVDGLTRVSRNDDIVASVEIVSALHRRFGASFTGDMMNHVLLL
TLNEEVDDDEKASNQVVSRQKNLLRLVGEFYLTGIVRTGSDLLEFVDARLIKLYALDKRR
NEPLWTLLLKYLLNFNLDSGRTLGMVQSFLRRFRHVIMGSDDLLSSEVKHVSKQIFIIYT
EAILGVALNLKKEVHKIEKRNRKASIRTGRIQESDELDFKVVQETFDNFKVALKYLSPIV
GVEVPETLYDDDFGDQDENTVEVVKQKPAVEDDANGVWEDAKEKAFYTVIPSLAELMDNY
DNNKDKNQDKNQDKNQDRNQDRNQDTDQNQSKDQEEDSASVSSGERIQDFLDRLEDVRSN
DLEQLVVEFNNLNLNNKATRNRIMKFFIETSTLNNLKYYTRFLKIDESKLSDLIEDLITY
LDNGFRSQLHRNKLNVKNILFFVELIKFKMIPVHIIFHKIRSLTVNITSTNNIEILSVFY
ENVGRFLLNEPEYKDYTREMIELLREKSKQSNITVNDKLAINNLLITVEPPAAKIQREIK
VLSPKSQFIQTIIRSELTAKSLPLVAQLLKKAIHDIDKEGFQTLLDCFARPDLLNYDNIG
ALAKLLQVFAEKQRRVIILTVDTVIENIIRGLEMNDFRMNRARMSQVKYVAEMYNNKIVN
FKLVNDILYRILCFGHPQNQPLPDNWEVDIDYPNNYFRIQLCCLLLLSLESIYIATDVSK
KKSPNRANEVKKRNEMNRNLLGVFVTFLQYYIYCKEHPFPVEVKFKLDDMFAKYKSVPTV
VRYQSVQDIMKRLAESIQTKEDAESFLDNDAENGEEAFDDMSSTGSSSGEEDDDEDLDDE
EEEDEEDDEEDSEDSEEGEDDNDDDDAEDEEAAEEGSDEEDDDADDSESEDTEERASAEV
LSEAERLRLEADRKFQSDLDREFQRIMIESYGSTVQNSQDLRFKQRLPAPGQFYKDDGRL
NSISANGSKVSFGLLTKNGKGNNVRQLNLPTDNRFAESVLREQENRRKDRERIINLASQM
ES
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgacattggaattagatggttggcgaagacacttgttggaattaaatttgcaggcatgg
gagaatgagttttcgtttcccgttgcaaccaagttggactcttcgttgaaaaagaataca
gcgtttatcaaaaagatcaaaacaagcttgaacccggaccagttggagaatatcctagct
gatatcaaaacggtttcgttggaaaagtatttatcggaagtgattgcttccttggtggat
ggattgacacgagtttcgagaaacgatgacattgttgcctcggttgaaatcgtgtccgct
ttgcaccggagatttggcgctagtttcaccggcgacatgatgaatcatgttctcttgctc
accttgaacgaagaagtcgacgacgacgaaaaggcatccaatcaagttgtttctcggcaa
aagaaccttttgaggctagtgggagagttttacttgacgggaattgtacgaacaggaagc
gacttgttggagtttgttgacgctagactcatcaagttgtatgccttggacaagagacgc
aacgagccgctttggactttgcttctcaagtatttactcaatttcaaccttgacctgggc
agaaccctcggcatggtgcaatcctttttgagaagattccgccacgttatcatgggaagt
gacgatttattgagctcggaagtcaagcacgtgtcgaagcaaattttcatcatttacacg
gaagccatcctcggtgtagcgttaaatttgaaaaaagaagtacacaagattgaaaagagg
aacagaaaagcgtcgattaggaccggtaggattcaggaaagcgacgagctagactttaaa
gttgttcaagagacttttgacaacttcaaggttgcgttaaagtacttgtcgcccattgtt
ggcgttgaagttccggagacattgtacgatgacgatttcggagaccaagatgaaaacaca
gtggaggttgttaagcaaaagccagcggtggaggatgacgcaaatggagtctgggaagat
gccaaagaaaaggcattctacaccgtgattcccctgttggcagaattgatggacaattat
gataataataaagataaaaatcaagataaaaatcaagataaaaatcaagatagaaatcaa
gatagaaatcaagatacagatcaaaatcaaagtaaagatcaagaagaggattctgcttcg
gtgtcttctggagaaagaattcaagactttttggacaggttggaagatgtcaggtcgaat
gacttggagcaacttgtggtggagttcaacaacctcaatctcaacaacaaggcgacaaga
aacagaatcatgaagtttttcatcgagacttcgacattaaacaacttgaaatattacaca
agatttcttaaaattgacgagctgaaattgtccgacttgattgaggatttaatcacatat
ttagacaatggattcaggtcacagctccaccggaacaagctcaatgtcaagaatattcta
ttctttgtcgagttgatcaagtttaaaatgatccccgtgcacatcattttccacaagata
cgttcacttacggtgaacataacctcaaccaacaatatcgagattttatcggtcttttat
gaaaatgtcggtagattccttttaaacgagcccgaatacaaagattacactcgagaaatg
attgagcttctccgagaaaaactgaagcaatcaaacatcaccgttaatgacaagttggca
atcaacaatttactcatcacggtggagcccccagcggcaaagattcaacgcgagattaaa
gttctttcgccaaaactgcaatttatacagacaattatccgatcagagttgaccgccaag
ctgcttcctcttgttgctcaacttttgaaaaaggcaatacatgacattgacaaggaaggt
ttccagacattgctcgattgctttgctcgccccgacttactcaactacgacaacattggc
gccttggccaagctcttgcaagtattcgccgagaagcagagaagagtgattattctcaca
gtcgacaccgttattgagaacataatccgtggtcttgaaatgaatgatttccgaatgaac
agagcaaggatgtcccaggtcaagtacgtggctgagatgtataacaataagattgtgaat
ttcaagcttgtcaatgacattttatatcgtattctatgctttggccacccgcaaaatcaa
cctttaccagataattgggaagtggatattgattaccctaataactactttaggatccag
ttgtgttgcttgttgctactttccttggagtctatctatatcgccaccgacgtgtctaaa
aagaaatctccaaacagagccaacgaggttaaaaagaggaacgagatgaatagaaatctc
cttggagtatttgtcacgttcttgcaatactacatctactgcaaagagcatcctttccca
gttgaagtcaagttcaagttggacgatatgtttgccaagtacaaaagtgtgccaactgta
gtccgctaccagtctgtacaagatataatgaagaggctagctgagctgattcagactaaa
gaggacgcggagtcctttttggacaacgatgcagagaatggagaagaggcctttgacgac
atgtcctcgacgggaagcagctcaggagaagaagacgacgacgaagatcttgatgatgag
gaggaggaggatgaagaagatgatgaggaggatctggaggatctggaggaaggtgaagat
gacaacgacgacgacgatgcggaggatgaggaggcggcggaggagggcctggacgaagaa
gacgacgatgccgacgatagtgaaagtgaagacactgaagaacgtgcctccgcggaagtc
ctctcggaagcggagaggctcaggctcgaggcagatcgcaaattccagagcgatttggac
agggaattccagcgaatcatgattgagtcgtatggaagcacagttcaaaacagccaggat
ctaaggttcaaacagcggctaccagcgccaggacaattttacaaagacgatggccggctc
aactccatttccgccaatggtagcaaagtctcgtttgggttgttgaccaaaaatggcaag
ggcaacaatgtaagacaattgaatttgcccaccgataatagatttgcggaatcggtgttg
agagagcaagagaataggagaaaagatcgagaaagaatcataaacttggcttcacagatg
gaaagctaa
DBGET
integrated database retrieval system
