Lodderomyces beijingensis: 92210067
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Entry
92210067 CDS
T10315
Symbol
LODBEIA_P48710
Name
(RefSeq) uncharacterized protein
KO
K11600
exosome complex component RRP41
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
92210067 (LODBEIA_P48710)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbg03019
]
92210067 (LODBEIA_P48710)
Messenger RNA biogenesis [BR:
lbg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
92210067 (LODBEIA_P48710)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
92210067 (LODBEIA_P48710)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
INTS7_C
Motif
Other DBs
NCBI-GeneID:
92210067
NCBI-ProteinID:
XP_066831809
LinkDB
All DBs
Position
6:complement(328135..328869)
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AA seq
244 aa
AA seq
DB search
MSRMELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKIICTVTGPVEPG
SRAQTNQEKAKVEVNLTIANFSTFERKKRSKSEKRLVELRTTLERTFEQSILLHLYPRTS
IIVNVQVLNQDGGMLAAITNAITLALLDAGIAMYDYVSSISCGLHDQSPLLDLNNLEESD
MSCLTIGVIGKSEKLALLMLEDKMPLDNLEKILSIAIAGSHRIKDLMDMEVRRHGNSRAA
KLLK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgaatggagttatactcgcccgaagggctaaggatagacgggcgaagatggaac
gagctacgccggtttgaatgccgaataaacacccatcccaactcgtcagatggctcatcc
tacgttgagcaaggcaacaccaagatcatatgcacggtgactggtccagttgagccgggc
agcagagcacagacgaaccaagagaaagccaaggtagaggtgaatctcaccattgccaat
ttttccacttttgagagaaaaaaacggtcaaagagcgaaaagaggctcgtggagttgcga
accacgcttgagcggacgtttgagcagctgatcttgctccatttgtaccctaggaccagt
attattgtcaatgtgcaagtgttgaaccaggatggaggcatgcttgctgcgataaccaac
gcgatcacgttggcgttgttggacgcgggtattgccatgtacgactacgtgagcagcatc
agctgtggattacatgaccagtcgcccttgttggacttgaacaatttggaggagctggac
atgagctgcttgaccattggcgtcattggcaaaagcgagaagttggccttgttgatgctt
gaagataagatgcccttggacaatttggagaagatcttgagcattgccattgccggaagc
caccgaatcaaggacttgatggacatggaggtgcggagacacggaaactcgagagctgca
aaattactcaagtga
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