Lodderomyces beijingensis: 92210294
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Entry
92210294 CDS
T10315
Symbol
LODBEIA_P50980
Name
(RefSeq) uncharacterized protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
92210294 (LODBEIA_P50980)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbg03019
]
92210294 (LODBEIA_P50980)
Messenger RNA biogenesis [BR:
lbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
92210294 (LODBEIA_P50980)
mRNA degradation factors
5'-3' decay
Decapping complex
92210294 (LODBEIA_P50980)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
92210294
NCBI-ProteinID:
XP_066832036
UniProt:
A0ABP0ZRV9
LinkDB
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Position
6:complement(898333..900780)
Genome browser
AA seq
815 aa
AA seq
DB search
MSFFGFDPTRPPPGAGNEEVYDFENTYQGLGEPEEDDAFNSETFGASTSEIRKDFKFSDE
SAASDSSLKTTVTANQPTSLSYAQAVSSGPANDDEFMQELWGTSNAPSKPAPLEKEEGGG
APEKKILSLEEIEAQLTAIDQSQQQFPPQQHGSFPPHGYGLPGMMPSHHLNPHAPPPPPP
QFNGYVMGGYMLNQFGYPGMLPQQIAHMPPPVAQAPQFQQPTEQNQPPQVQQGDNSQPSV
AEKEKQAASSQPVRIQKVDLSQFPVLGSKEAIQQHQHQQQQQHEYLEQHQQQQPQQQNHH
HQQQQQQQQQQQQQQQQQQQQYQRQQQLHSGQVHPHQRLQDLTPEEREKALKRQEKVSRI
MRYSGIMVPKDKDFVTRFQLSQIVTEDPYNEDFYAQVYKVIHPKTVNGIQTAPEEQNNSI
AQAYLDHSGHRLGGRYKRADVALQRMQQQVQKAVAVAKDRPKPKQYTKEGALGKISFASG
KKPRQQLEIISKAAEREKKEDRSEKKEDIRKYSKKDILATLENIITELMNAESESRTQAE
VDTAKLWEATKVLEQTSTSGDEESEVNPFIQCLNYNKMLKILVRFFKFLNREQILTIAAL
VMSNLENLSVIKNGSYTTYPDKKVPASILKLVDAYSLTFSKVLMNAVLDFKFNEIVGLLV
ILIEHNNVSFVSTTKIGLTILTTLLSRAELIIGEGQISATDLSEWSSCYDELFTALESRI
AAIFPPNPVEVDDGSSRENYIWQFLATLSLGGKLSHQRIIVDELRDEIFGVMNRAKAIDN
SDLANLYKKQNLLNNLNMYLVVMGLVADENEIKEI
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttttggatttgatcccaccaggccgccgccaggcgcaggaaacgaggaagtt
tacgattttgaaaacacgtatcaaggattaggtgaaccggaagaggatgacgcattcaat
tcagagacgtttggcgccagtaccagcgagattaggaaagattttaagttttcggacgaa
tcagcagctagtgatagcagtttaaaaaccaccgtcactgcaaaccagccgacttcgctt
agttatgcccaagctgtgctgagcgggcccgcgaatgatgacgaattcatgcaagagttg
tggggaacgtcgaatgctccaagcaagccggctccgcttgagaaggaggaggggggagga
gcgccggagaagaagattttgtcgttggaggaaatcgaggcccagcttactgctattgac
caatctcagcagcagtttcctccacagcaacatggcctgttccctcctcacggttacgga
ctccccgggatgatgccttctcaccatctcaatccacatgcaccgccgccaccaccacct
caatttaatggttatgtcatgggtgggtacatgctcaatcaatttggctatcccggaatg
ttgccccagcagattgcccacatgccgcctcccgtggctcaagctcctcagtttcagcaa
cctactgagcaaaatcaaccaccacaagttcaacaaggtgacaatctgcaaccatcggtg
gctgaaaaggaaaaacaagctgcttcatcacaacccgtgaggattcaaaaagtcgacttg
tcccaattcccagtgctcggatcgaaagaagccatccagcagcaccagcaccagcaacag
cagcagcatgagtacttggagcaacaccaacaacagcaaccacaacaacaaaatcaccat
catcagcaacaacaacaacaacaacaacagcaacaacagcaacagcaacagcaacagcaa
caatatcaacgtcaacagcagcttcattctggccaggttcacccccaccagcgtctacaa
gacctaacaccggaggaacgggaaaaggcattaaagagacaagagaaggtctcaagaatc
atgcgatactcgggaataatggtcccaaaggacaaggattttgtgaccagattccaattg
tcgcaaattgtcactgaggacccttataatgaagatttctacgctcaagtttacaaagtc
atccaccccaaaacggtgaatgggatccagaccgctccagaagagcagaacaactccatt
gctcaggcatacttggaccacagtggacacagattaggcgggcgttacaagagagccgac
gttgccttgcagagaatgcagcagcaagtgcagaaagcagtggcggttgccaaggacaga
cctaagcctaagcaatacaccaaggaaggagctttgggtaagatttcgtttgctagcggc
aagaagcccagacagcaattggagattatcagcaaagccgccgagagggaaaagaaggag
gatcggagtgaaaagaaggaggatatccgcaagtactccaaaaaggacattttggccacg
ttggagaatatcattaccgaattgatgaatgccgagagcgaatcgagaacccaggctgag
gtcgacaccgccaagctttgggaagcaacaaaagtgttggagcagacctcgacctcgggc
gacgaggagagcgaagtcaacccatttatccaatgcttaaactacaacaagatgttgaag
atcttggttcgtttcttcaagtttctcaaccgggagcaaatattgacgattgccgctttg
gtgatgtcgaacttggagaatttgtccgtcatcaagaacgggtcatatacaacttacccc
gataagaaagtacctgcctcgatcctcaaactcgttgacgcctactcgttgactttttcc
aaagtgttgatgaatgccgtgttggatttcaagttcaatgagattgtggggctattggtg
attttgatcgagcacaacaatgtctcctttgtctccaccaccaagatcggcttaaccatc
ttgaccactttgttatcgcgtgccgagttgatcattggcgaagggcagatttccgccact
gacttatcggaatggtcatcatgttacgatgaattgtttactgcgttggaatcgaggatt
gcagctattttcccgcccaatccagttgaagtcgacgatggatcatcgagagaaaactac
atttggcagttcctcgctacgttatcgctcggaggcaaattgagccaccagagaatcatt
gttgacgagttgcgagatgaaatctttggcgttatgaaccgggccaaggctattgacaat
ctggacttggccaacttgtacaagaaacagaacttgttgaacaatttgaacatgtatctc
gttgtgatggggcttgttgccgatgagaatgaaattaaagagatttga
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integrated database retrieval system
