Lodderomyces beijingensis: 92210406
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Entry
92210406 CDS
T10315
Symbol
LODBEIA_P52100
Name
(RefSeq) uncharacterized protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03022
Basal transcription factors
lbg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
92210406 (LODBEIA_P52100)
09124 Replication and repair
03420 Nucleotide excision repair
92210406 (LODBEIA_P52100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbg03021
]
92210406 (LODBEIA_P52100)
03400 DNA repair and recombination proteins [BR:
lbg03400
]
92210406 (LODBEIA_P52100)
Transcription machinery [BR:
lbg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
92210406 (LODBEIA_P52100)
DNA repair and recombination proteins [BR:
lbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
92210406 (LODBEIA_P52100)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
92210406
NCBI-ProteinID:
XP_066832148
LinkDB
All DBs
Position
6:1180566..1182767
Genome browser
AA seq
733 aa
AA seq
DB search
MDTVRGACSKDKVGGMVFIREDITPSMLEWKAVDDEKNKIAIPLNKLVALQATKESVPKM
ILQVVYQSATEGEPDQKIKLHFNNRPTMNNIKDALQTIVVRTKTRVEGSSTPTPGGGFQN
GTPSASGSSAGSASASAAAAGQSGTPESATPSSSAPSSFGGFPLAQQALSDANLLKNYEL
QQKLLLEDRNLRNVFTKSVMKFKLSPTIFWSSRVNQLRTFALTVSQHKGPYNVLSTIKPV
ATSDNQVNVNVTRDTINEIFDIYPIIKRAFTDLVPQKLSEGEFWSRFFNSKLFRRLRGDK
IGLNSGRGDVILDKYMYMDEKSATTKQKPDEKNNTENESVEKSPTKKLKKQKLEAVAPAE
ESPPERNLHVNKTIDLFGNEQDNSQKLGNRPDMTMRYDDDDDQYNNSNNNSNNNGKDLSA
LLNSAKQSSKRENEMIILMKNMNKLSSKMMSMSSAEAASAAKGENTVDGLSAEELNEYEE
ELNLHDLNDIEDSHYIRLNINTNVGDKNSKLEHQDGTEEEQAQLVSDAELARFAQEQFND
FDVAGTGTFSLTDTFTDKNEDIEKTSAEISNLIKQNFKTYKALNRDDPSVSTASYGGSSS
SSNEPRNLVPSEISQEIITYNITIVEFLSHFWKLFLHGKNPQQLKKIFTSLKNCSNSLKE
FKTRAVSQLESVEIIANNAKLKDKVLKDFNSCLEPLELSLSNAISKYVGAVHSSSSNGTT
TTTTTTTSTAASS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggacactgttaggggagcatgctccaaggacaaagtcgggggcatggtgttcatcaga
gaggacatcacgccctcgatgctcgagtggaaagcagtcgatgacgaaaagaacaagatc
gccatccccttgaacaagctagttgccctccaggccaccaaggaaagcgtgccgaaaatg
atcctccaagtcgtttaccagtcggcaaccgagggagagccggaccaaaagatcaaattg
catttcaataatcggcccaccatgaataatattaaggatgcccttcaaacgatagtggtg
cggacgaaaaccagagtcgagggctcctccacgccgacgcccggaggtggtttccaaaat
ggaaccccgtcagcttctgggtcgtccgctgggtctgcttcagcttcagctgcggcagcg
ggacaactgggcactcccgagtccgccacaccgtcttcctcggcgccatcgagttttgga
gggttcccgctagcgcagcaagccctctccgacgcaaatttactcaaaaactatgaattg
cagcagaaattgctcctcgaagaccgaaatctacgcaatgttttcacgaaatccgtcatg
aagttcaaattgtctcccacgatattctggtcgagtcgcgtcaatcagctacgaactttt
gccttgaccgtgtcgcagcacaagggtccctacaatgtcttgagcacgatcaaaccggtg
gccacttccgacaaccaagtcaacgtcaatgtcacgcgtgacaccatcaatgagattttc
gacatttaccccattataaaaagagcatttaccgacctcgtgccgcagaaactactggaa
ggtgagttttggtcgcgttttttcaactcgaaattgtttcgaagattacgaggagacaag
attggcctcaatagcgggcgaggcgatgtgatacttgacaagtacatgtacatggatgaa
aaaagtgccacgacaaagcagaaacctgacgaaaaaaacaacactgagaatgaatctgtc
gaaaagtcgcccaccaagaagctaaagaagcagaaactagaagcagtggctcccgctgag
gagtctccacctgagcgaaacctccacgtgaataaaactatcgatttgtttggtaacgaa
caggataattctcagaaattgggtaatagacccgatatgaccatgagatatgacgatgat
gatgatcaatataacaacagtaataataacagtaataataatggcaaggatctactggct
ttactcaattccgccaagcaatcctccaaaagagaaaatgaaatgattatactaatgaag
aatatgaataaattgtcctccaagatgatgagtatgagctccgccgaggcagcatcggct
gcaaaaggcgagaatacagttgacggcttatcagctgaggaactcaatgagtacgaagag
gagttgaacctacacgacttgaatgacattgaggattcgcactatattagattgaatata
aatactaatgtgggggataaaaattccaaattggagcaccaggacggcacagaagaagaa
caagcacaactagtcagcgatgcagagcttgccaggtttgctcaagaacaattcaacgac
tttgacgtggcgggcaccggcacgttttcactaaccgatacattcaccgacaagaacgag
gacattgaaaagacttcggccgaaatctccaatttgatcaagcagaatttcaagacttac
aaggccctcaacagggacgacccttcagtctccaccgcgtcctacggcggtagcagcagc
agcagcaacgagcctagaaatctcgttcccctggaaatatcacaggagatcatcacttac
aatatcaccatcgttgagtttttgtcgcatttttggaagttgtttctccatggcaagaac
ccgcagcagttgaagaagatcttcacgagcttgaagaactgctcgaatctgttgaaggag
tttaaaactcgagccgtctcgcagttggaatcggtggagattatcgcgaataatgcgaaa
ttgaaggataaagtcttgaaggatttcaattcctgcttggagcccttggaactcagcttg
ctgaatgcaattagcaaatacgttggagcggtgcattcgctgagcagcaatgggacaaca
acaacaacaaccaccaccacatcaacagctgcatcttcatga
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