Lodderomyces beijingensis: 92210579
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Entry
92210579 CDS
T10315
Symbol
LODBEIA_P53830
Name
(RefSeq) uncharacterized protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03040
Spliceosome
Brite
Enzymes [BR:
lbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
92210579 (LODBEIA_P53830)
Spliceosome [BR:
lbg03041
]
Complex C
Other components
Step II factors
92210579 (LODBEIA_P53830)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
HA2_N
DEAD
YppG
AAA_22
S1_RRP5
ABC_tran
nSTAND3
AAA_19
AAA_23
ResIII
ATPase
T2SSE
Motif
Other DBs
NCBI-GeneID:
92210579
NCBI-ProteinID:
XP_066832321
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All DBs
Position
7:156063..159248
Genome browser
AA seq
1061 aa
AA seq
DB search
MRKALNLVDWPVGGKRVFEVDVEVSRPKILIAAILPCDRQGRSHSRCPSIDYETISKQDC
PCLPSLLSMSDSSGDVGCETSRKDVVEKHFKGLDEENVQLITEFLGDLLQRCGSSPSLAR
FHEKVRANGGEEFDRAFIKEFYEFDYSSTGRQTTTTTATAKRSRDESEGIHEGIVTSLQP
YGAFVSFGNKSGMCHVSEISNSMINHPADVLELNQVVFVRILDERIERGRTRICLSMRDV
DQKRQLDEFDDNLDRRSKSPRPNSESKPQVPSSTNPGPEISTDVELNQSRPKFLQQQQPQ
PQQQPLQQHQKSKAGFDMNKIFNTVGEMRQAAANGSELAKQFREDKFKQSKLKNKQAVIE
DDPLYQKEKVQDVVTRWKHAHKTKFVKPSKESIDLQRKSLPIYQMRQDLVTQIRDNQFIV
IVGETGSGKTTQIVQYIYEEKLHVFNGCEKIIGCTQPRRVAATSVAGRVADEVGCVVGDE
VGYNVRFDDNTSYKTKIKYLTDGMLEREALSDPELSNYAVIMLDEAHERTIATDVLFALL
KKAALKNPNLKVIVTSATLDAEKFSTYFNNCPIMRIPGRTFPVEVLYTKEPEMDYLAAAL
NSVMQIHLSEPVGGDILVFLTGQEEIDTSCEVLADRMQTLGDAASELIILPVYASLPPEQ
QTMIFEPAPPGARKVILATNIAETSITIDGIYFVVDPGYVKINAFDPRAGMDSLRVCPIS
QAQANQRSGRAGRTGPGKCYRLYTENSYAQMLPNAIPEIQRQNLSHTTLMLKAMGINDLV
NFEFMDPPSSHTLFASLEDLYMLDALDDEGNLTKLGREMADYPMEPALAKVLIKSMEFGC
TEEILSIVAMLSVQTIFYRPHKRRALADQRKARFHSTQGDHLTLLNVYQRFMLNHGSQTW
CQDNFIQHRSMKKAVDVRKQLRLILQKYGYKDFRSSGDPSVILKTLCCGYFKNTAERSSD
AGYMILANRESVFLHPSSSMWGKSPEFVLYHTVLSTTKQYIHCVSVIQPQWLVELSPKFF
KKGDPSTSQRSEKIVPLFANQRKDSKRRGWRNGLRRVQSKK
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaagctctcaatttggtggattggccggttggtggcaagagagtttttgaggtt
gatgttgaagttctgcggccgaaaattttaatagcagccattttaccgtgcgatcgacaa
ggcagatcccactctcgatgcccgtcgatagactacgaaacgattagcaaacaggattgc
ccttgcttgccgtctcttttgtccatgtcagacagtctgggggatgttggttgtgaaacg
tccaggaaagacgttgttgaaaagcacttcaagggactagacgaggagaatgtacagtta
atcactgaatttcttggtgacttgttgcaaagatgcggttcttcgccatcgcttgccagg
ttccatgagaaagtcagagccaatggaggggaggagtttgatcgagcttttattaaggaa
ttttatgagtttgattatctgctgacagggaggcaaaccaccaccacaacagcaacagca
aagaggctgcgggatgaaagtgaaggcatccatgaaggaatcgtcacttccttgcaaccg
tatggtgcctttgttctgtttggcaacaagctggggatgtgccacgtgtcagagattagc
aactccatgattaaccatccggctgatgtgttggagttgaatcaagtagtctttgtcagg
atccttgacgagagaattgaacgtggacggacaaggatctgcttatcgatgagagacgta
gatcaaaagaggcaactcgatgaatttgacgacaacttggaccgccgcagcaagtcacca
aggccaaattccgagtcaaagccgcaggtgcccagttcaacgaatcctgggccagagatt
agtacagatgtcgagttgaaccagagccggccaaagtttctccaacaacagcaaccacaa
ccacagcaacaaccacttcaacaacatcaaaaatcaaaggctggttttgacatgaataaa
atattcaacaccgtcggggaaatgagacaggcagctgcaaacgggtcagagctagccaag
cagttccgtgaagataaatttaaacagctgaaattaaaaaacaaacaggctgtaatcgaa
gacgacccattgtaccaaaaagaaaaagtgcaggacgtagtcactcgctggaagcatgcc
cacaagacgaaattcgtcaaaccgtcaaaggagtcaattgacttgcaaaggaaatcacta
ccgatatatcaaatgaggcaagatttagtcacgcaaattcgagataaccagtttattgtt
attgttggtgagactggttccggtaagacgactcaaattgtccagtacatttatgaagaa
aaactacacgtgttcaacggctgcgagaaaataattggatgcacgcaaccacggcgagtt
gcagccacttcggttgcaggcagagtcgccgatgaagttgggtgtgtcgtgggggatgaa
gtgggctacaatgtgagattcgacgacaacacttcttacaagacaaagatcaagtatctc
acggatggtatgttggaacgagaagcattgctggacccagagttgagcaactatgcagtt
attatgctagatgaggcgcacgaaagaaccattgcaactgatgtgctatttgcattgctc
aaaaaggctgcattgaagaaccccaatttgaaagtcattgtgacctcggcaactttggac
gctgaaaaattctcaacctacttcaacaattgccccatcatgaggatcccgggaagaaca
ttccccgtggaagtgctttataccaaggaaccggaaatggactatttggccgcggcgttg
aactcggtgatgcagatacacttgtccgaacccgtgggcggtgacattctcgtgttttta
accggtcaagaggaaattgataccagttgcgaagttctagccgaccgaatgcaaacacta
ggagacgccgccagcgagctcatcattctccccgtttacgcgtcgttgccaccggagcag
cagaccatgattttcgagcctgcaccgccgggagctcgcaaggtgatccttgccacaaac
attgccgaaacgtccattaccatcgacggcatttactttgttgttgacccgggctatgtg
aaaattaatgcctttgacccccgcgcagggatggactcgttgcgcgtgtgccccatcagt
caagctcaagctaaccagcgaagcggtcgagccgggagaactgggcctggcaaatgttac
cgactatacaccgaaaactcgtacgcgcaaatgctccccaatgccattcctgaaatccag
cgccagaacttgtcgcatacgacattgatgttgaaagcaatggggatcaatgatcttgtc
aactttgaatttatggatccgccatcgtctcacaccttgtttgcgtcattggaagattta
tacatgttggacgcgttagatgatgagggaaacctcaccaaactcggtcgagaaatggca
gattatcccatggagccggcattagccaaggttttgatcaaatcaatggagtttggatgc
acggaggagatccttagcatcgtggcgatgttgtctgtgcagacaatattttataggccg
cacaagagacgagcacttgcagatcagagaaaagctcgtttccatctgacccaaggcgat
catcttacattgctaaatgtctatcagcggttcatgctcaatcatggcagtcagacatgg
tgccaggacaattttattcagcatcgaagcatgaagaaagccgtggatgtgaggaagcaa
ttgcgattgattctacagaaatatggatacaaggatttcagatctagtggcgacccttcc
gtcattttgaaaacgctctgttgcgggtactttaaaaacacggcggagagaagttcggat
gctggatacatgatcctcgccaaccgcgagtctgtgtttctacatccgtcgctgagcatg
tgggggaaaagccccgagtttgtgctttaccacacggtcctcctgactactaaacagtat
atccactgcgtcagtgtgattcaaccgcaatggctagtggaactatccccaaaattcttt
aaaaagggcgacccatcgacatcccaaaggagtgaaaaaattgttcctcttttcgcaaac
caaagaaaagattcaaaaagacgtggttggaggaatggattacgaagggtgcaatcaaaa
aaataa
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