Lodderomyces beijingensis: 92210630
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Entry
92210630 CDS
T10315
Symbol
LODBEIA_P54340
Name
(RefSeq) uncharacterized protein
KO
K18748
protein SSD1
Organism
lbg Lodderomyces beijingensis
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbg03019
]
92210630 (LODBEIA_P54340)
Messenger RNA biogenesis [BR:
lbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
92210630 (LODBEIA_P54340)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
CSD2
Rrp44_CSD1
Rrp44_S1
Motif
Other DBs
NCBI-GeneID:
92210630
NCBI-ProteinID:
XP_066832372
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All DBs
Position
7:281555..285460
Genome browser
AA seq
1301 aa
AA seq
DB search
MVEQYNLQRQLDQVQAQQKQILEQQQQQQQQQQYQYPPQSSSSVYGDSSYLSPGYHHGSH
SRNASINAHKRTGSTGGTAHGHTRRHSLALNEAIAAADQQRTRQSSSPKASPAHDSAGDD
GAAGGSKTNSSSSSSSSFKFPSNPDNDSNYPSLSSSHSRTRSSQFGQPFKFPLPPPSSQQ
QQPTQQSGAGDQGNNSLLPPTPNFSVTQSPDRGGGGHNRRGSHFRTLSRNTEGMNQNWRS
QQQPPQSLPPQHHRQGSTLEPPTSAFVPGHRARNSSFGGGSSISSLSQFSTNNGSGQGGG
QGGGQPGGGNNGRKSLFAPYLPQSSLPELINEGRLVTGTLRVNKKNRSDAYVSTDGLLDA
DIFICGSKDRNRALEGDLVAVELLIVDEVWESKKEKEEKKRRKDHNTRPLNDDIHNDATS
APAPAPTPASASVSASASASATTTDGKDDKDEEAGLGRRGSLKQRPTMKKNDDVEVEGQS
LLLVEEEEINDEIKPLYAGHVVAVVDRIPGQLFAGTLGLLRPAQAAQAARDKKSGNESSV
NTPKAPKIVWFKPTDKKVPLIAIPTEQAPKDFVENHEKYGDQLFVASIKRWPITSLHPFG
TLVSKLGTVDSPETEVDSILRDNNFLCDEYLDEDEAGDGDKDEDEDGHGHGHGRGDKEDV
GGGGGASVENHYDLPSAEPELANKNRVEYANDYIIAFSQNGEFVDHALHVKRISNTKIEL
GFHVADISYFVERGSTLERKVKKRSSSVFLPQKIVHLYPKSANKLISFKENERNLALSVV
FEIDTTNFEVEDLFIHESIITPKQVVKYSAVNRILENDPDESISSATSDYIKTFSLIAKE
FRRHRLSNKDLGITPNLTLLNQLDDEKVSLSLNIFDDNLANDVVNEVALKVNSAIAAKIH
VGLGNKAFLRRQAIPTLQKMETFSRKATSLGVKIDSTNSATLQNTLLAIEDPVKRQCIEI
LLYKCMSRGKYYVAGKQDPDSYAHFYLNLPLYTHFTAPLRRYADLIVHRQLKTVLAKGTE
EKDLDALKAAADACNFKKDCAANAQEQAIHLLLSQTINEISESAGQVLCMGTVLQVYESS
FDVFIPEFGVEKRVHGDQLPLAKAEFDKSKRILELFWEKGIDSATYIPPDEKSSLSYRNS
IKNKYRTSAAEAAKIQSKTILEKDNFTTDSIVEKLNKMNLEPPKLKLPIPQQYNNNSNNK
SDATGMKERKDHTKSMPASPIHSHNNLPQNARTNSSSVISESNENSYSTGLAPYLQGIET
RVEGQNYIQVIKELSQVPVLLRAEIGMTLPCLTVRVLNPFM
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggttgaacaatacaatttacaacgtcaattggaccaagtacaagctcaacagaagcaa
atcttagaacaacagcaacagcaacagcagcagcaacaatatcagtacccaccccagtct
tcctcctccgtgtatggagattcactgtacttgtcacccggttatcatcacggctcccac
tcaagaaatgcatctataaatgcccataaaagaacagggtcaactggaggcaccgcccat
ggccacaccagaagacactcacttgcattgaacgaagcaattgctgctgcagaccaacaa
cgaactagacaaagctcaagtcccaaggccagccccgcgcacgattcggccggcgacgat
ggcgccgccggcggcagcaagaccaattcttcttcgtcttcttcttcctcttttaaattc
ccactgaatcccgataatgattcaaattatccatcattgtcgtcatcgcatagtcgtacc
aggtcgctgcagtttggccaaccttttaaatttccactaccaccaccatcatcgcaacaa
cagcaaccaacacaacaatccggggcaggcgatcaaggtaataatagcttgctccctcca
acacccaatttcagcgtcactcaatctcccgatcgcggcggaggaggccacaatagaaga
ggatcgcatttccgaacattgtcgagaaacaccgagggcatgaaccaaaactggagatct
cagcaacaaccaccacagtcattgcctcctcagcaccacagacaaggttccactttagaa
ccaccaacctctgcgtttgttccaggtcacagagcacgcaatagttcctttggtggcggc
tcgtccatatcgtcgttgtcgcaattttcaacaaacaatggttctggccaaggagggggc
caaggaggaggccagcccggtggtggcaataatggcagaaaatcgctttttgctccctat
ttgccccagtcttcgctcccggaattgataaatgaaggtagattggtgactggcaccttg
agagttaacaagaaaaacagatcagacgcctatgtctcgaccgacggcttgctcgacgcc
gatatattcatttgcggttccaaggatcgtaatagagcattggagggcgacttggttgcc
gtggaattgttgattgttgacgaagtttgggaatccaagaaggaaaaggaggagaaaaag
aggagaaaagaccacaatacgaggcccttaaacgacgatatccacaatgacgcaacttct
gcacctgcacccgcgcctacaccggcatcggcatcggtatcagcatctgcatcagcatct
gccaccaccactgacggcaaggatgataaagacgaagaggcgggacttggtagaagaggt
tcccttaagcagagaccaaccatgaagaagaatgacgatgtcgaagtagaaggccaatcg
ttgctcttggttgaagaagaagagatcaatgacgaaatcaaaccgctctatgctgggcac
gttgttgcagttgtcgatcgtattccaggccaattgtttgcgggcactttggggttgttg
agaccggctcaagcagcacaagcggcaagggacaagaaatccggcaacgagtcctctgtg
aacacgccaaaagcaccgaaaatcgtttggttcaagcccacggataaaaaggttccttta
atcgccatcccaaccgagcaagcacccaaggactttgtggagaaccacgaaaaatacggc
gaccaattattcgtggcttcaatcaagaggtggccaatcacgtctttgcacccgttcggt
actttggtgtcgaagttgggcaccgttgatagtcctgaaaccgaggtggactctatcttg
agagacaacaactttttatgtgacgagtacttggacgaagatgaagctggagatggagat
aaagatgaagacgaagatggacatggacatggacatggacgtggagataaagaagacgtt
ggcggtggtggtggtgctagtgttgagaaccactacgacttgccatcggccgaacccgag
ttggccaataaaaacagggtcgagtacgccaacgactacattattgcgttttcccagaat
ggcgagtttgtcgaccatgccttgcatgtaaagagaatctccaacaccaagattgagctt
ggtttccatgtggctgatatctcctactttgttgagcgaggctccacgttggaacgcaag
gtcaagaaaagatcatcttctgttttccttccgcaaaagattgtccacctctaccccaaa
ctggccaacaagttgatctcgttcaaagaaaacgagagaaaccttgcattatcagtggtt
tttgaaattgacaccacaaactttgaagttgaagatttgtttatccatgaatcgattatc
actccaaagcaagttgtcaaatacagcgccgtgaatcgaattttggaaaacgatcccgat
gagtcgatatcatctgccacttccgattacattaaaactttcagcttgattgcaaaagag
tttcgccgtcaccggttgtcaaacaaggacttgggcatcacacccaacttgactttattg
aaccagttggatgacgaaaaagtctcgttgagcttgaatatctttgatgacaacttggca
aacgacgttgtcaacgaggttgcactcaaggtcaactcagccattgcagcaaagatacac
gttggcttgggaaacaaggcctttttgcgtcgccaagcaattccaactttgcaaaaaatg
gagacattttcgagaaaggcaacaagcttgggcgttaagattgactccaccaactcggcc
acgttgcaaaacaccttgcttgccattgaggaccccgtcaagaggcagtgcattgagatt
ttattatacaagtgcatgtcgagaggcaaatactacgttgccggtaaacaggatcccgac
agttatgcccatttttacttgaatcttccgttgtatactcatttcacggcacccttgaga
cgttatgccgacttgattgtgcacagacagttaaagacggttttggcaaaagggactgaa
gaaaaagacttggatgcattaaaagccgctgccgatgcttgtaacttcaaaaaggactgt
gctgcaaatgctcaagagcaagccatccatttgttattgtcccaaacaattaacgagatt
agcgaaagcgcgggccaagtcttgtgcatgggaacggtgctccaagtttacgagtcctcg
tttgacgtgtttatccccgagtttggtgttgagaagagggtccacggagaccagctacca
ttggccaaggccgagtttgacaagagcaagagaatcctcgagctcttttgggaaaagggt
atcgactcggcaacctatatcccgcccgatgaaaaatcatcgctttcgtacagaaactcg
atcaagaacaaataccggacatctgctgccgaggcagccaagatccagagcaagacgatt
ttggagaaggacaacttcaccaccgactccattgttgaaaaattgaacaagatgaatttg
gagccgccaaaattgaagctcccgattcctcagcaatacaacaacaacagcaacaacaag
agcgatgccaccgggatgaaggagagaaaagaccacaccaagctgatgcccgcatcgcct
atccattcgcataataaccttcctcaaaacgcaaggaccaattcctcctccgtcatttcc
gaatccaacgaaaactcgtactctaccggattggctccatatttacaaggcatcgagaca
cgagtcgagggccagaactacattcaagtcattaaggaattgagccaagttcctgtcttg
ctaagagccgagatcgggatgacgttgccatgcttgaccgtgcgtgtcttgaacccgttt
atgtag
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integrated database retrieval system
